| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15921782
Identifier: 15921782
GI number: 15921782
Start: 1485184
End: 1485828
Strand: Direct
Name: 15921782
Synonym: ST1489
Alternate gene names: NA
Gene position: 1485184-1485828 (Clockwise)
Preceding gene: 15921776
Following gene: 15921786
Centisome position: 55.11
GC content: 32.71
Gene sequence:
>645_bases ATGAATAATTGGTTTACGTATAAGCAGAGAGCCTGGGAAAGAGTAATTAGGGATAAAGAGATAGGATACCTTGATCCAGA TATATTTGATACACTGGAAGTCTTTTTTAAAAGAAGGGATACTTTTACCCAAAGTAGTTGTAGCGGAAGAATTACGATAA TAGATGCTGAGATGCCATGGGAGAGGAAAAATTCCAGTGTAGTCTTCAAAAATCATTTAGGAATTACGGTTACTGATTTG TTAGAAACTATAAATAAAGGGAAAGTTTGGAATTTATGGTTAGTAGTTCAAGGACCAATATTTCATGTTTATACTAGAAC AAATGAAGAAGCTTGGAATATATTAAAATTAGCCAGATCTGTAGGTTTTAAACATAGTGGTGTTTTGACCGTAAATGAGA AAGGTGTATTGGTAGAGTTAAGAACTGGAGTAAAAATGGTGCATCTGCTCAAAGATAATTATGATGAAAAAGAAGCTAAT GAGCTAGTAGTAATTGCTAACAAAGTATTACAGAAAGGAAAGGAGAAATTACGCAAATTAAAAGAAGTTGTTGAGAACTC ATTGAATTCCAACAATTCTATGGAATTGAGGAAGAACTCTGAAGGGAATTCCGAGTTTCAATATAATATCAATAAGCTCT CTTAA
Upstream 100 bases:
>100_bases TCTCCTTCGTTAACTCTAATTACGGCTTCTTCCTCTTTTAGAAATCTGTTAACTATATCATCCACAATATTTTAAAGTTA CGATAAGTTAAAAAGAAAAG
Downstream 100 bases:
>100_bases GCCTTCCGTATAATTCTCTTTTCTTCCGTCGGGTTGAAGAATAACTTTGCTTGGTTCAATATTATTCTCTCTTATAAATC TTATTATTTCTTGAATATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNNWFTYKQRAWERVIRDKEIGYLDPDIFDTLEVFFKRRDTFTQSSCSGRITIIDAEMPWERKNSSVVFKNHLGITVTDL LETINKGKVWNLWLVVQGPIFHVYTRTNEEAWNILKLARSVGFKHSGVLTVNEKGVLVELRTGVKMVHLLKDNYDEKEAN ELVVIANKVLQKGKEKLRKLKEVVENSLNSNNSMELRKNSEGNSEFQYNINKLS
Sequences:
>Translated_214_residues MNNWFTYKQRAWERVIRDKEIGYLDPDIFDTLEVFFKRRDTFTQSSCSGRITIIDAEMPWERKNSSVVFKNHLGITVTDL LETINKGKVWNLWLVVQGPIFHVYTRTNEEAWNILKLARSVGFKHSGVLTVNEKGVLVELRTGVKMVHLLKDNYDEKEAN ELVVIANKVLQKGKEKLRKLKEVVENSLNSNNSMELRKNSEGNSEFQYNINKLS >Mature_214_residues MNNWFTYKQRAWERVIRDKEIGYLDPDIFDTLEVFFKRRDTFTQSSCSGRITIIDAEMPWERKNSSVVFKNHLGITVTDL LETINKGKVWNLWLVVQGPIFHVYTRTNEEAWNILKLARSVGFKHSGVLTVNEKGVLVELRTGVKMVHLLKDNYDEKEAN ELVVIANKVLQKGKEKLRKLKEVVENSLNSNNSMELRKNSEGNSEFQYNINKLS
Specific function: Unknown
COG id: COG1590
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0130 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003827 - InterPro: IPR022908 [H]
Pfam domain/function: PF02676 TYW3 [H]
EC number: NA
Molecular weight: Translated: 24937; Mature: 24937
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNWFTYKQRAWERVIRDKEIGYLDPDIFDTLEVFFKRRDTFTQSSCSGRITIIDAEMPW CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC ERKNSSVVFKNHLGITVTDLLETINKGKVWNLWLVVQGPIFHVYTRTNEEAWNILKLARS CCCCCCEEEECCCCEEHHHHHHHHCCCCEEEEEEEEECCEEEEEECCCHHHHHHHHHHHH VGFKHSGVLTVNEKGVLVELRTGVKMVHLLKDNYDEKEANELVVIANKVLQKGKEKLRKL CCCCCCCEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHH KEVVENSLNSNNSMELRKNSEGNSEFQYNINKLS HHHHHHHCCCCCCEEEEECCCCCCEEEEEEEECC >Mature Secondary Structure MNNWFTYKQRAWERVIRDKEIGYLDPDIFDTLEVFFKRRDTFTQSSCSGRITIIDAEMPW CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC ERKNSSVVFKNHLGITVTDLLETINKGKVWNLWLVVQGPIFHVYTRTNEEAWNILKLARS CCCCCCEEEECCCCEEHHHHHHHHCCCCEEEEEEEEECCEEEEEECCCHHHHHHHHHHHH VGFKHSGVLTVNEKGVLVELRTGVKMVHLLKDNYDEKEANELVVIANKVLQKGKEKLRKL CCCCCCCEEEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHH KEVVENSLNSNNSMELRKNSEGNSEFQYNINKLS HHHHHHHCCCCCCEEEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10701121; 11427726 [H]