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The map label for this gene is ydaM [H]

Identifier: 15921692

GI number: 15921692

Start: 1407638

End: 1409020

Strand: Direct

Name: ydaM [H]

Synonym: ST1403

Alternate gene names: 15921692

Gene position: 1407638-1409020 (Clockwise)

Preceding gene: 15921691

Following gene: 15921693

Centisome position: 52.24

GC content: 29.28

Gene sequence:

>1383_bases
ATGAGTATTAGTTTGTTGCTTCAGTTTTTAATATTTCTTTACCCAGCATTGTTTGTCACATATCAAATGTTTTTGTATAG
GATTGCTAATAATACTATTGATTCTAATTACATAGAAGTTAAAAATTACCCCTTCTTATCTATTATAGTTCCTACAAAAG
GCGAAAAAATATCTATTATTCAAGGCTTGATAAAAAATATCTCGGAATTAATATGGGATAAAGATAAAATGGAAGTAATT
ATTGTTTCAGATGATACAGAGGAATATTTTGAAGAAATAAAGAGCAAGCTTATTATTCCAGAAGGTTTAAAAGTATATTT
ATATAGAAGAGAAAAGAAGCTGGGTTATAAGAGCGGTGCTTTATTATATGGATATGAGAGGTCTAAGGGTGAGTTAATAT
TAACTATTGATGTAGATTCCAGGTTACAGAAAGATGCACTTGTAAAAGCTTATTCTAGAATGATAACTAATAACTGTGAT
GCTGTAGCTCTACAATGGGTGGGGTATTCAGAGAATACTTATTCTAAACTAGCTAAGGGCATAATGGCTTCTACTTTTTT
TGCTAGTAAAGCTCTCTTTGAAGGTAAAGAGAAGATTCACTTAACTGTTTTCCCAGTGGGTAGTGGTACCTTATTTAGAA
GGGATGCACTAGAAAGTGTAGGAGGTTGGGACTATAAAATAATTCAAGATGACCTAGAAATAGGTACAAGATTAATAAAC
AAAAATAAAAAAATATGCTCCTCTGGTGTTCCAATTTATATTGAAGTACCTGACAATTTCTTTTCTTTCTATATTCAGCA
AACAAGATGGGCTATGGGTACTGGAGAAGTTATTAGAAATAGGTTAAGATATATAATAACAGCGAAAGTTGGTATACTAA
AAAAGATAGATATGATATTTCATTTATTACAATATACTCCAATTCTCTTTACATTTATAGGGTCAATGATATTAGTAATA
TTAGCTCCTTTTATTAATTATGACCCTTTAAAAACTCCATTATTTCTATTTTGGGGTATTATATTAAGTTTATATGCATA
TATAATTTATGAGGTTGCCATAAAATTAGGTTTTAGGAAAAGAGACGCTATATTCTCGTTAGGTAGGGTATCTGGATTTA
CAGTAGCAATCTCACCATTTATATTCTATTATTTTCTAAAAGGTTTATTAAGCAATAGAAAAACCTATATTATTACACCA
AAAGGTGGAAATAAAATAAGCAAGCAATATAGGACGATAATTATTATAGGGCTTCTAGGGATTATATATACTCTTGCTGT
TATAATATATTTGTTACACCATAATTATTTTACCTCTTTATGGTTAGCCTACTATTCTTCCGGTTTCTTGTATACTTTAT
TAACTTTTAACAAGGAATTATGA

Upstream 100 bases:

>100_bases
GAATACGTTATTAGTATTGCTCTAAAAGGATTAAGATTTCCACCAAAATCAACTAGGCACGAGTATAAATTTTATATAGC
TAAAGAAGAAATTGGGATTA

Downstream 100 bases:

>100_bases
ACAAATCTTTTTAATAGCCTAACTAGTTATCTACATCTGGATGGAAATTAATTATACAAATTACTTAACCGATGATGAAA
TACTAAGTATGTTAACGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MSISLLLQFLIFLYPALFVTYQMFLYRIANNTIDSNYIEVKNYPFLSIIVPTKGEKISIIQGLIKNISELIWDKDKMEVI
IVSDDTEEYFEEIKSKLIIPEGLKVYLYRREKKLGYKSGALLYGYERSKGELILTIDVDSRLQKDALVKAYSRMITNNCD
AVALQWVGYSENTYSKLAKGIMASTFFASKALFEGKEKIHLTVFPVGSGTLFRRDALESVGGWDYKIIQDDLEIGTRLIN
KNKKICSSGVPIYIEVPDNFFSFYIQQTRWAMGTGEVIRNRLRYIITAKVGILKKIDMIFHLLQYTPILFTFIGSMILVI
LAPFINYDPLKTPLFLFWGIILSLYAYIIYEVAIKLGFRKRDAIFSLGRVSGFTVAISPFIFYYFLKGLLSNRKTYIITP
KGGNKISKQYRTIIIIGLLGIIYTLAVIIYLLHHNYFTSLWLAYYSSGFLYTLLTFNKEL

Sequences:

>Translated_460_residues
MSISLLLQFLIFLYPALFVTYQMFLYRIANNTIDSNYIEVKNYPFLSIIVPTKGEKISIIQGLIKNISELIWDKDKMEVI
IVSDDTEEYFEEIKSKLIIPEGLKVYLYRREKKLGYKSGALLYGYERSKGELILTIDVDSRLQKDALVKAYSRMITNNCD
AVALQWVGYSENTYSKLAKGIMASTFFASKALFEGKEKIHLTVFPVGSGTLFRRDALESVGGWDYKIIQDDLEIGTRLIN
KNKKICSSGVPIYIEVPDNFFSFYIQQTRWAMGTGEVIRNRLRYIITAKVGILKKIDMIFHLLQYTPILFTFIGSMILVI
LAPFINYDPLKTPLFLFWGIILSLYAYIIYEVAIKLGFRKRDAIFSLGRVSGFTVAISPFIFYYFLKGLLSNRKTYIITP
KGGNKISKQYRTIIIIGLLGIIYTLAVIIYLLHHNYFTSLWLAYYSSGFLYTLLTFNKEL
>Mature_459_residues
SISLLLQFLIFLYPALFVTYQMFLYRIANNTIDSNYIEVKNYPFLSIIVPTKGEKISIIQGLIKNISELIWDKDKMEVII
VSDDTEEYFEEIKSKLIIPEGLKVYLYRREKKLGYKSGALLYGYERSKGELILTIDVDSRLQKDALVKAYSRMITNNCDA
VALQWVGYSENTYSKLAKGIMASTFFASKALFEGKEKIHLTVFPVGSGTLFRRDALESVGGWDYKIIQDDLEIGTRLINK
NKKICSSGVPIYIEVPDNFFSFYIQQTRWAMGTGEVIRNRLRYIITAKVGILKKIDMIFHLLQYTPILFTFIGSMILVIL
APFINYDPLKTPLFLFWGIILSLYAYIIYEVAIKLGFRKRDAIFSLGRVSGFTVAISPFIFYYFLKGLLSNRKTYIITPK
GGNKISKQYRTIIIIGLLGIIYTLAVIIYLLHHNYFTSLWLAYYSSGFLYTLLTFNKEL

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=253, Percent_Identity=26.4822134387352, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 53022; Mature: 52891

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISLLLQFLIFLYPALFVTYQMFLYRIANNTIDSNYIEVKNYPFLSIIVPTKGEKISII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCCCHHHH
QGLIKNISELIWDKDKMEVIIVSDDTEEYFEEIKSKLIIPEGLKVYLYRREKKLGYKSGA
HHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCEECCCCCEEEEEEEHHHCCCCCCC
LLYGYERSKGELILTIDVDSRLQKDALVKAYSRMITNNCDAVALQWVGYSENTYSKLAKG
EEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH
IMASTFFASKALFEGKEKIHLTVFPVGSGTLFRRDALESVGGWDYKIIQDDLEIGTRLIN
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHH
KNKKICSSGVPIYIEVPDNFFSFYIQQTRWAMGTGEVIRNRLRYIITAKVGILKKIDMIF
CCHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HLLQYTPILFTFIGSMILVILAPFINYDPLKTPLFLFWGIILSLYAYIIYEVAIKLGFRK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
RDAIFSLGRVSGFTVAISPFIFYYFLKGLLSNRKTYIITPKGGNKISKQYRTIIIIGLLG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
IIYTLAVIIYLLHHNYFTSLWLAYYSSGFLYTLLTFNKEL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
>Mature Secondary Structure 
SISLLLQFLIFLYPALFVTYQMFLYRIANNTIDSNYIEVKNYPFLSIIVPTKGEKISII
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCCCHHHH
QGLIKNISELIWDKDKMEVIIVSDDTEEYFEEIKSKLIIPEGLKVYLYRREKKLGYKSGA
HHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCEECCCCCEEEEEEEHHHCCCCCCC
LLYGYERSKGELILTIDVDSRLQKDALVKAYSRMITNNCDAVALQWVGYSENTYSKLAKG
EEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH
IMASTFFASKALFEGKEKIHLTVFPVGSGTLFRRDALESVGGWDYKIIQDDLEIGTRLIN
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHH
KNKKICSSGVPIYIEVPDNFFSFYIQQTRWAMGTGEVIRNRLRYIITAKVGILKKIDMIF
CCHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HLLQYTPILFTFIGSMILVILAPFINYDPLKTPLFLFWGIILSLYAYIIYEVAIKLGFRK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
RDAIFSLGRVSGFTVAISPFIFYYFLKGLLSNRKTYIITPKGGNKISKQYRTIIIIGLLG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
IIYTLAVIIYLLHHNYFTSLWLAYYSSGFLYTLLTFNKEL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]