Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

Click here to switch to the map view.

The map label for this gene is 15921183

Identifier: 15921183

GI number: 15921183

Start: 921856

End: 922776

Strand: Direct

Name: 15921183

Synonym: ST0947

Alternate gene names: NA

Gene position: 921856-922776 (Clockwise)

Preceding gene: 15921182

Following gene: 15921184

Centisome position: 34.21

GC content: 29.53

Gene sequence:

>921_bases
ATGAAATCTTATGCTATTTTAAACCAGAATAATCTATTTTTATCCTTAGAAGAACTTAAAGCAATAATAGATTCTGATGA
AGTAGAATATTATCATGGTGTAGCCTTATTTAATAAAGAACCTAATAATGTTGCCAAAAGATCAAGTTTAATTAAATATA
GTGGGAGAGTTATTGCTATATCCCATGATGTAAATGAAATAGTAAAAAATATAAAGGGTGAATGTTTTTCCGTTGATCCT
ACTGTTATAACTAAGGAATATAAAAGTGAGTTTTTATCTATATATGATAGAATTATAAATAATATAAAAGTATCAAAGAA
ATGTAAAAAAATGGATTTGATCTTTACAGAAGGATTAATTATAGCTGGTCTTAGGGTTGAGGAAAAGGATAATGAAAGCT
TATTTAAGCATTCTAAAAAGCCTTATTCTCAATCTGGTACTTTATCTCCAGACATAGGTAGACTAATGGTTAATCTTTCT
AAAAGTAGAAAAACGATCCTAGACCCTTTTGTAGGAACCGGGACAATATTAATAGAGGCTAAATGGTTAGGACTTAATTG
TATTGGTCTTGATGTTGATAGTAAAATGATAGAAAAGAGCTTAGTTAATTTAAGGTACTTTGGTTATGAATGTGATATCT
TAAGAGGAGATGCAACATCTTTACCTTTTAATAATATTGAAGCTATTGTTACTGATCCTCCCTATGGTAGATCTGTAAGT
GTAAGGGAGGGGATAAACAATCTGTATGAGGGCTTCTTCTATTCGGCAAGCAATATAACGCGTACTTTAGTTTTTACTAC
GGACTCTAAATTAGATTGGAGAGATAAGTTAAAGGAAGTTGGTTTTAATGATATTTCAATCCATTTTATTTATGAGCATA
AAAGTTTAAGCAGAGCAATATACGTGGTAAGAAAAAAATGA

Upstream 100 bases:

>100_bases
TTAATAGTGGAGTTAAGGAGATTGTAACAACTAATACTATACCACAAGATCCATCAAAAGTAACAGTAGTTGATGTATCA
CCAGCTATAGCGAGAAAAAT

Downstream 100 bases:

>100_bases
TTACAGTATATTTTATAGGTACTGGTGGAGGAGCTCCTAATAAAAGGGGCTTACCAGCAATTATGGTTAGAAGGGAAGGT
TTTGATGCTCTATTTGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKSYAILNQNNLFLSLEELKAIIDSDEVEYYHGVALFNKEPNNVAKRSSLIKYSGRVIAISHDVNEIVKNIKGECFSVDP
TVITKEYKSEFLSIYDRIINNIKVSKKCKKMDLIFTEGLIIAGLRVEEKDNESLFKHSKKPYSQSGTLSPDIGRLMVNLS
KSRKTILDPFVGTGTILIEAKWLGLNCIGLDVDSKMIEKSLVNLRYFGYECDILRGDATSLPFNNIEAIVTDPPYGRSVS
VREGINNLYEGFFYSASNITRTLVFTTDSKLDWRDKLKEVGFNDISIHFIYEHKSLSRAIYVVRKK

Sequences:

>Translated_306_residues
MKSYAILNQNNLFLSLEELKAIIDSDEVEYYHGVALFNKEPNNVAKRSSLIKYSGRVIAISHDVNEIVKNIKGECFSVDP
TVITKEYKSEFLSIYDRIINNIKVSKKCKKMDLIFTEGLIIAGLRVEEKDNESLFKHSKKPYSQSGTLSPDIGRLMVNLS
KSRKTILDPFVGTGTILIEAKWLGLNCIGLDVDSKMIEKSLVNLRYFGYECDILRGDATSLPFNNIEAIVTDPPYGRSVS
VREGINNLYEGFFYSASNITRTLVFTTDSKLDWRDKLKEVGFNDISIHFIYEHKSLSRAIYVVRKK
>Mature_306_residues
MKSYAILNQNNLFLSLEELKAIIDSDEVEYYHGVALFNKEPNNVAKRSSLIKYSGRVIAISHDVNEIVKNIKGECFSVDP
TVITKEYKSEFLSIYDRIINNIKVSKKCKKMDLIFTEGLIIAGLRVEEKDNESLFKHSKKPYSQSGTLSPDIGRLMVNLS
KSRKTILDPFVGTGTILIEAKWLGLNCIGLDVDSKMIEKSLVNLRYFGYECDILRGDATSLPFNNIEAIVTDPPYGRSVS
VREGINNLYEGFFYSASNITRTLVFTTDSKLDWRDKLKEVGFNDISIHFIYEHKSLSRAIYVVRKK

Specific function: Unknown

COG id: COG1041

COG function: function code L; Predicted DNA modification methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 THUMP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005885
- InterPro:   IPR002052
- InterPro:   IPR002296
- InterPro:   IPR000241
- InterPro:   IPR004114 [H]

Pfam domain/function: PF02926 THUMP; PF01170 UPF0020 [H]

EC number: NA

Molecular weight: Translated: 34823; Mature: 34823

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSYAILNQNNLFLSLEELKAIIDSDEVEYYHGVALFNKEPNNVAKRSSLIKYSGRVIAI
CCCEEEEECCCEEEEHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHEEECCEEEEE
SHDVNEIVKNIKGECFSVDPTVITKEYKSEFLSIYDRIINNIKVSKKCKKMDLIFTEGLI
ECCHHHHHHHCCCCEEECCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCEE
IAGLRVEEKDNESLFKHSKKPYSQSGTLSPDIGRLMVNLSKSRKTILDPFVGTGTILIEA
EEEEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHEECCCCCHHHHCCCCCCCEEEEEE
KWLGLNCIGLDVDSKMIEKSLVNLRYFGYECDILRGDATSLPFNNIEAIVTDPPYGRSVS
EEECEEEEEECCCHHHHHHHHHHEEEECEEEEEEECCCCCCCCCCCEEEEECCCCCCEEE
VREGINNLYEGFFYSASNITRTLVFTTDSKLDWRDKLKEVGFNDISIHFIYEHKSLSRAI
HHHHHHHHHHHHEEECCCCEEEEEEEECCCCCHHHHHHHCCCCEEEEEEEEECCCCCEEE
YVVRKK
EEEECC
>Mature Secondary Structure
MKSYAILNQNNLFLSLEELKAIIDSDEVEYYHGVALFNKEPNNVAKRSSLIKYSGRVIAI
CCCEEEEECCCEEEEHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHEEECCEEEEE
SHDVNEIVKNIKGECFSVDPTVITKEYKSEFLSIYDRIINNIKVSKKCKKMDLIFTEGLI
ECCHHHHHHHCCCCEEECCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCEE
IAGLRVEEKDNESLFKHSKKPYSQSGTLSPDIGRLMVNLSKSRKTILDPFVGTGTILIEA
EEEEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHHHEECCCCCHHHHCCCCCCCEEEEEE
KWLGLNCIGLDVDSKMIEKSLVNLRYFGYECDILRGDATSLPFNNIEAIVTDPPYGRSVS
EEECEEEEEECCCHHHHHHHHHHEEEECEEEEEEECCCCCCCCCCCEEEEECCCCCCEEE
VREGINNLYEGFFYSASNITRTLVFTTDSKLDWRDKLKEVGFNDISIHFIYEHKSLSRAI
HHHHHHHHHHHHEEECCCCEEEEEEEECCCCCHHHHHHHCCCCEEEEEEEEECCCCCEEE
YVVRKK
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]