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The map label for this gene is rps27e

Identifier: 15921176

GI number: 15921176

Start: 917555

End: 917755

Strand: Reverse

Name: rps27e

Synonym: STS105

Alternate gene names: 15921176

Gene position: 917755-917555 (Counterclockwise)

Preceding gene: 15921177

Following gene: 15921175

Centisome position: 34.06

GC content: 36.82

Gene sequence:

>201_bases
ATGAAGGCAAAATTCAAAGTTTTAATTCCAGAACCTAAAAGCAAATTTATTAGAATAAAATGCCCTAACTGCGGAAATGA
ACAAACAGTGTTTAGCCACGCAACTTTTCCAGTGAGATGCTTATCTTGTGGCACACAACTTGTATATCCTAGGGGCGGTA
AGGCTAAAATAGTCGGTGAAACAGTTAGAATACTAGGTTAA

Upstream 100 bases:

>100_bases
CAAAGAAACAAACACTAGTATTAAAATGTCAAAAATGTGGATATACTATAATGAGAGAAGGATTAAGAATGAAGAAGATT
GAACTAGTTGAGGTGGTTAA

Downstream 100 bases:

>100_bases
AAATGATTTATAATAAAAACCCTATTCCAACTGAAGGAGAAATTTTAATTGCAACTGTAAAACAAATTTTTGATTATGGT
AGCTATGTAACTCTAGATGA

Product: 30S ribosomal protein S27e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MKAKFKVLIPEPKSKFIRIKCPNCGNEQTVFSHATFPVRCLSCGTQLVYPRGGKAKIVGETVRILG

Sequences:

>Translated_66_residues
MKAKFKVLIPEPKSKFIRIKCPNCGNEQTVFSHATFPVRCLSCGTQLVYPRGGKAKIVGETVRILG
>Mature_66_residues
MKAKFKVLIPEPKSKFIRIKCPNCGNEQTVFSHATFPVRCLSCGTQLVYPRGGKAKIVGETVRILG

Specific function: Unknown

COG id: COG2051

COG function: function code J; Ribosomal protein S27E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27e family

Homologues:

Organism=Saccharomyces cerevisiae, GI6321809, Length=56, Percent_Identity=53.5714285714286, Blast_Score=61, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322693, Length=56, Percent_Identity=53.5714285714286, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS27_SULTO (Q973F9)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376845.1
- ProteinModelPortal:   Q973F9
- SMR:   Q973F9
- GeneID:   1458905
- GenomeReviews:   BA000023_GR
- KEGG:   sto:STS105
- NMPDR:   fig|273063.1.peg.1013
- HOGENOM:   HBG392194
- OMA:   KIRCPDC
- ProtClustDB:   PRK00415
- BioCyc:   STOK273063:STS105-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00371
- InterPro:   IPR000592
- InterPro:   IPR022959
- InterPro:   IPR011332
- PANTHER:   PTHR11594

Pfam domain/function: PF01667 Ribosomal_S27e; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 7293; Mature: 7293

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: PS01168 RIBOSOMAL_S27E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKFKVLIPEPKSKFIRIKCPNCGNEQTVFSHATFPVRCLSCGTQLVYPRGGKAKIVGE
CCCEEEEEECCCCCCEEEEECCCCCCCCEEEECCCCCEEEECCCCEEEECCCCCEEEEEE
TVRILG
EEEECC
>Mature Secondary Structure
MKAKFKVLIPEPKSKFIRIKCPNCGNEQTVFSHATFPVRCLSCGTQLVYPRGGKAKIVGE
CCCEEEEEECCCCCCEEEEECCCCCCCCEEEECCCCCEEEECCCCEEEECCCCCEEEEEE
TVRILG
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479