BacMap

Definition	Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession	NC_003106
Length	2,694,756

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The map label for this gene is yqjQ [H]

Identifier: 15921171

GI number: 15921171

Start: 911037

End: 911774

Strand: Direct

Name: yqjQ [H]

Synonym: ST0938

Alternate gene names: 15921171

Gene position: 911037-911774 (Clockwise)

Preceding gene: 15921170

Following gene: 15921172

Centisome position: 33.81

GC content: 32.93

Gene sequence:

>738_bases
ATGAAAATTGCTATTATAACTGGTGCTTCTAAAGGAATTGGTAAGGCTATAGCTATCAAGCTGAAAAATGAAGGATATAC
TGTAGTTTCTATATCTAGGAGTAAAGCAGAAGTTGGTGATATTATATATGAGGCCGATGTTACAGATAAGGAAAATGATT
TTAGAATTGTGAAGGAAGTATATGAGAAGTTTGGAAGAATAGATGTTTTAGTTAATAACGCTGGTTTTGGTATCTATGGT
TCTTTTCTTGAAACGTCTTTGGATGAGGAAGAGTATATGATAAAGACTCTTTTTGTTGCACCATTATATTTTATTAAGTC
TGTATATCCTATCATGGTAAGGCAGAGGGAAGGTAGTATAGTTAATATTGTTTCTGAAGCAGCATATGTTGCTACACCTA
AACTCATTGTTTATTCAGCTGCTAAGGCAGGATTAGCACAATTTACCAATGCTTTGTGGGCAGAAGCTAGGAAATATAAC
GTTAAAGTTAGTGGTATTTATCCGGGGCCGGTAAAAACTAATTTTACTTCTCATCCTTCATTTAAGAATTCAGAGGATAT
TTTTAGCAAATATGCTGTAACTCCAGATAAAGTTGCCAATGCAGTTGTAAAAGCTATAAAGACTGGAAAGAGAGAAATTT
ATGTTCCTTCTAAATTAAAGATCGAACCATATTTTCTAAAGTTTGCTAGACTTTTTGAGAGTTTAACCTATTGGATAGTC
TCAAAGTATTTTAGCTAA

Upstream 100 bases:

>100_bases
AAAGGGACTTCCGAAGAGGAAGTTAATAAGATCGTAGAAAGAAACTTTAAAAAAGCATTTGGGTAAAAGTTTATGATTAT
GGTTTAAGGTAAGGTAGATT

Downstream 100 bases:

>100_bases
TCTTGTGGTAGGATTTATAAAGTATTATTTAATAGATTAGTAAATCATGAAACGGAATACCCTTTTGGCTTTGGTTTTAG
TAATATTGATTTTCCCTACG

Product: reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKIAIITGASKGIGKAIAIKLKNEGYTVVSISRSKAEVGDIIYEADVTDKENDFRIVKEVYEKFGRIDVLVNNAGFGIYG
SFLETSLDEEEYMIKTLFVAPLYFIKSVYPIMVRQREGSIVNIVSEAAYVATPKLIVYSAAKAGLAQFTNALWAEARKYN
VKVSGIYPGPVKTNFTSHPSFKNSEDIFSKYAVTPDKVANAVVKAIKTGKREIYVPSKLKIEPYFLKFARLFESLTYWIV
SKYFS

Sequences:

>Translated_245_residues
MKIAIITGASKGIGKAIAIKLKNEGYTVVSISRSKAEVGDIIYEADVTDKENDFRIVKEVYEKFGRIDVLVNNAGFGIYG
SFLETSLDEEEYMIKTLFVAPLYFIKSVYPIMVRQREGSIVNIVSEAAYVATPKLIVYSAAKAGLAQFTNALWAEARKYN
VKVSGIYPGPVKTNFTSHPSFKNSEDIFSKYAVTPDKVANAVVKAIKTGKREIYVPSKLKIEPYFLKFARLFESLTYWIV
SKYFS
>Mature_245_residues
MKIAIITGASKGIGKAIAIKLKNEGYTVVSISRSKAEVGDIIYEADVTDKENDFRIVKEVYEKFGRIDVLVNNAGFGIYG
SFLETSLDEEEYMIKTLFVAPLYFIKSVYPIMVRQREGSIVNIVSEAAYVATPKLIVYSAAKAGLAQFTNALWAEARKYN
VKVSGIYPGPVKTNFTSHPSFKNSEDIFSKYAVTPDKVANAVVKAIKTGKREIYVPSKLKIEPYFLKFARLFESLTYWIV
SKYFS

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=248, Percent_Identity=26.6129032258064, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI7706318, Length=266, Percent_Identity=26.3157894736842, Blast_Score=99, Evalue=2e-21,
Organism=Homo sapiens, GI40254992, Length=185, Percent_Identity=32.4324324324324, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI32483357, Length=194, Percent_Identity=31.4432989690722, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI210032110, Length=249, Percent_Identity=27.3092369477912, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI7657478, Length=262, Percent_Identity=26.3358778625954, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4503817, Length=221, Percent_Identity=26.6968325791855, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI157739938, Length=239, Percent_Identity=24.2677824267782, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI142976729, Length=235, Percent_Identity=27.2340425531915, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI109715829, Length=231, Percent_Identity=25.974025974026, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI5031737, Length=206, Percent_Identity=27.6699029126214, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=28.7958115183246, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI40807363, Length=266, Percent_Identity=25.5639097744361, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI226371731, Length=224, Percent_Identity=29.9107142857143, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI31542939, Length=240, Percent_Identity=27.5, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI210032112, Length=239, Percent_Identity=27.6150627615063, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=29.7297297297297, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI19923817, Length=235, Percent_Identity=27.2340425531915, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI7705925, Length=176, Percent_Identity=26.1363636363636, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI4504505, Length=185, Percent_Identity=26.4864864864865, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1786701, Length=231, Percent_Identity=28.1385281385281, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI87082100, Length=218, Percent_Identity=32.1100917431193, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI87082160, Length=189, Percent_Identity=32.2751322751323, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1787335, Length=216, Percent_Identity=30.0925925925926, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787820, Length=215, Percent_Identity=30.2325581395349, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1788459, Length=187, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790717, Length=184, Percent_Identity=28.2608695652174, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1789208, Length=190, Percent_Identity=26.8421052631579, Blast_Score=65, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=196, Percent_Identity=34.6938775510204, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17561402, Length=190, Percent_Identity=31.5789473684211, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17562910, Length=199, Percent_Identity=31.1557788944724, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17551412, Length=208, Percent_Identity=30.2884615384615, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17538480, Length=197, Percent_Identity=32.48730964467, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17538486, Length=196, Percent_Identity=31.6326530612245, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=197, Percent_Identity=28.4263959390863, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI71994604, Length=206, Percent_Identity=25.7281553398058, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=199, Percent_Identity=32.6633165829146, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=198, Percent_Identity=32.3232323232323, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71997402, Length=232, Percent_Identity=27.1551724137931, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=195, Percent_Identity=29.7435897435897, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562906, Length=213, Percent_Identity=26.7605633802817, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=203, Percent_Identity=26.6009852216749, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=196, Percent_Identity=27.0408163265306, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17531453, Length=197, Percent_Identity=28.4263959390863, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=207, Percent_Identity=26.0869565217391, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17568967, Length=185, Percent_Identity=30.2702702702703, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560676, Length=220, Percent_Identity=25.4545454545455, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=189, Percent_Identity=29.1005291005291, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=195, Percent_Identity=29.7435897435897, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=230, Percent_Identity=27.8260869565217, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI72000259, Length=196, Percent_Identity=30.1020408163265, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17570069, Length=221, Percent_Identity=28.0542986425339, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=191, Percent_Identity=30.8900523560209, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=195, Percent_Identity=27.1794871794872, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=201, Percent_Identity=29.3532338308458, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17560176, Length=210, Percent_Identity=27.6190476190476, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=186, Percent_Identity=30.1075268817204, Blast_Score=73, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6323882, Length=226, Percent_Identity=27.8761061946903, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI23397609, Length=184, Percent_Identity=35.8695652173913, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI21358495, Length=263, Percent_Identity=24.7148288973384, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28571526, Length=203, Percent_Identity=32.0197044334975, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24644339, Length=193, Percent_Identity=33.160621761658, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24640492, Length=263, Percent_Identity=24.7148288973384, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24640442, Length=193, Percent_Identity=31.6062176165803, Blast_Score=80, Evalue=9e-16,
Organism=Drosophila melanogaster, GI281364892, Length=235, Percent_Identity=25.531914893617, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21357041, Length=187, Percent_Identity=28.8770053475936, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI116007236, Length=196, Percent_Identity=30.6122448979592, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24649181, Length=236, Percent_Identity=27.5423728813559, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI28574402, Length=190, Percent_Identity=28.9473684210526, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24584744, Length=190, Percent_Identity=28.9473684210526, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI116007238, Length=213, Percent_Identity=28.169014084507, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21355319, Length=190, Percent_Identity=30, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI161076933, Length=189, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24584748, Length=189, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24580925, Length=194, Percent_Identity=27.319587628866, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21355631, Length=249, Percent_Identity=23.2931726907631, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24648944, Length=251, Percent_Identity=29.4820717131474, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356301, Length=232, Percent_Identity=25.4310344827586, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27429; Mature: 27429

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAIITGASKGIGKAIAIKLKNEGYTVVSISRSKAEVGDIIYEADVTDKENDFRIVKEV
CEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCHHHCCEEEECCCCCCCCHHHHHHHH
YEKFGRIDVLVNNAGFGIYGSFLETSLDEEEYMIKTLFVAPLYFIKSVYPIMVRQREGSI
HHHHCCEEEEEECCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCE
VNIVSEAAYVATPKLIVYSAAKAGLAQFTNALWAEARKYNVKVSGIYPGPVKTNFTSHPS
EEHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCC
FKNSEDIFSKYAVTPDKVANAVVKAIKTGKREIYVPSKLKIEPYFLKFARLFESLTYWIV
CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCEEECHHHHHHHHHHHHHHHHHH
SKYFS
HHHCC
>Mature Secondary Structure
MKIAIITGASKGIGKAIAIKLKNEGYTVVSISRSKAEVGDIIYEADVTDKENDFRIVKEV
CEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCHHHCCEEEECCCCCCCCHHHHHHHH
YEKFGRIDVLVNNAGFGIYGSFLETSLDEEEYMIKTLFVAPLYFIKSVYPIMVRQREGSI
HHHHCCEEEEEECCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCE
VNIVSEAAYVATPKLIVYSAAKAGLAQFTNALWAEARKYNVKVSGIYPGPVKTNFTSHPS
EEHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCC
FKNSEDIFSKYAVTPDKVANAVVKAIKTGKREIYVPSKLKIEPYFLKFARLFESLTYWIV
CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCEEECHHHHHHHHHHHHHHHHHH
SKYFS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]