Click here to switch to the map view.

The map label for this gene is tldD [C]

Identifier: 15920886

GI number: 15920886

Start: 646508

End: 647893

Strand: Direct

Name: tldD [C]

Synonym: ST0664

Alternate gene names: 15920886

Gene position: 646508-647893 (Clockwise)

Preceding gene: 15920882

Following gene: 15920887

Centisome position: 23.99

GC content: 35.06

Gene sequence:

>1386_bases
ATGGATCTAAATGCGATTCTGAAAAAGTTTTCTGAATTCGAGTATGTTGAGGTAAGGGAACATAAAATAAGTTCTACCCA
CTTCTTTGTTATTAACGGTTCCCCTGCTGGTTTAGCTAGTGTCAGTCATTCTGGTTACAGTGTTAGAGCATTTAAGGATT
CTGTTATGTACTTTACTTCTTCTTCAGATGTAAAGGATCTATCTCCTTTGTCATTTTCCTTAAAAGAATGGGAAAAAGGC
TACTCTTTGGATCAGAGAACAAGCGGGGAATACTCAGTTAATGAAAAGGAGAAAATAAAAGATGTGCCACTTGAAGAAAA
ACAGAAAATTTTTGTTAATATTGCAAATAGTCTAAAAAATATAAAGGTTAATTCCAAAATAGTTTCTGTCATTTTCAGTT
ATTCTGAATCAGTTGAGGATAAGAATATTTTGTTTGAAGACGGTACTACTGTTCATGGGTTAGTGCCAAGAATTCATGTC
TCAGCAAGTGTTTCAATGGTTAGTGATAAGGCTAGTGCAACATTTTATGAGGAATTTGGAGGTAGTGGAGGTTTTGAGTT
GATAAAAATTTGGGACATAGAAAATGCATTGGCCGAGAAAATCAGAAACGTTGATGAAGTACTTACAAAGGGTAAAGGAG
TTACTCCTGGAAGAAAAGATGTAATATTCAGTAATATGCTATCTGGTATAATGGCTCATGAGTCTGTAGGTCATCCATTT
GAGGCTGACAGAGTTCTTGGTAGGGAATCGGCTCAAGCTGGTTTAAGTTATTTAGTTAATAGAAATTTTGGTGAGAAAAT
TGGTTCTGACATTGTTAATGTTATTGATGATCCAACGCTTCCTAACAGTTCTGGATTTTACTTAATTGATGATGAAGGTA
TTAAGGCTAGGGCTAAGTTTTTAATAAAAGATGGAAAGATAAACGAATTACTTCAAGATCGATTTTCAGCATATAAATTC
GGTGTGAATAGTAATGGTTCTGCTAGGGCTTCAAGATTTGATAGAGAGCCGTTAGTTAGGATGTCTAACACTTTCTTTAT
GCCTAGTAATTTTACATTTGATGAGCTTCTTGAAGACGTTAAGGACGGTATTTATCTAAAATCCTATATGGAATGGAATA
TTGATGATCTGAGAATCGGTCAACGCTATATAGGTCTGGAAGCTTATGAAGTTAGAAATGGTGAAATTAAAGAACCATTA
TTATTCCCTGTTATTGAGGGCACAACTTTTGAATTCCTATCTTCAATTGACGCTATAGATAATACTTTAAAGTTTTACTA
CGGTACCTGCGGAAAAGGAGATCCGGATCAAGGTATCCCAGTTTGGATGGGTGGGCCAAATATGAGATTAAGGAATATTT
CCGTAAAGGTGAGAGGTTATGAATGA

Upstream 100 bases:

>100_bases
TTTTTGCACTTAAATTATTCAAATTAGAGGTCTTATTAAGTTGAAAGCAAAAGTCTTATGTAAAGGAATTTATAATAGTT
AGTATACACCTAAATAACTT

Downstream 100 bases:

>100_bases
GGAGCTAATTAAGTTAATGGAAAGTTTAAAAGGCTTTGATGAAGTTGGTATTCTTCAACTTAAGACTAGGAAATTGTTAG
TTAAGTTTGTTTACAGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MDLNAILKKFSEFEYVEVREHKISSTHFFVINGSPAGLASVSHSGYSVRAFKDSVMYFTSSSDVKDLSPLSFSLKEWEKG
YSLDQRTSGEYSVNEKEKIKDVPLEEKQKIFVNIANSLKNIKVNSKIVSVIFSYSESVEDKNILFEDGTTVHGLVPRIHV
SASVSMVSDKASATFYEEFGGSGGFELIKIWDIENALAEKIRNVDEVLTKGKGVTPGRKDVIFSNMLSGIMAHESVGHPF
EADRVLGRESAQAGLSYLVNRNFGEKIGSDIVNVIDDPTLPNSSGFYLIDDEGIKARAKFLIKDGKINELLQDRFSAYKF
GVNSNGSARASRFDREPLVRMSNTFFMPSNFTFDELLEDVKDGIYLKSYMEWNIDDLRIGQRYIGLEAYEVRNGEIKEPL
LFPVIEGTTFEFLSSIDAIDNTLKFYYGTCGKGDPDQGIPVWMGGPNMRLRNISVKVRGYE

Sequences:

>Translated_461_residues
MDLNAILKKFSEFEYVEVREHKISSTHFFVINGSPAGLASVSHSGYSVRAFKDSVMYFTSSSDVKDLSPLSFSLKEWEKG
YSLDQRTSGEYSVNEKEKIKDVPLEEKQKIFVNIANSLKNIKVNSKIVSVIFSYSESVEDKNILFEDGTTVHGLVPRIHV
SASVSMVSDKASATFYEEFGGSGGFELIKIWDIENALAEKIRNVDEVLTKGKGVTPGRKDVIFSNMLSGIMAHESVGHPF
EADRVLGRESAQAGLSYLVNRNFGEKIGSDIVNVIDDPTLPNSSGFYLIDDEGIKARAKFLIKDGKINELLQDRFSAYKF
GVNSNGSARASRFDREPLVRMSNTFFMPSNFTFDELLEDVKDGIYLKSYMEWNIDDLRIGQRYIGLEAYEVRNGEIKEPL
LFPVIEGTTFEFLSSIDAIDNTLKFYYGTCGKGDPDQGIPVWMGGPNMRLRNISVKVRGYE
>Mature_461_residues
MDLNAILKKFSEFEYVEVREHKISSTHFFVINGSPAGLASVSHSGYSVRAFKDSVMYFTSSSDVKDLSPLSFSLKEWEKG
YSLDQRTSGEYSVNEKEKIKDVPLEEKQKIFVNIANSLKNIKVNSKIVSVIFSYSESVEDKNILFEDGTTVHGLVPRIHV
SASVSMVSDKASATFYEEFGGSGGFELIKIWDIENALAEKIRNVDEVLTKGKGVTPGRKDVIFSNMLSGIMAHESVGHPF
EADRVLGRESAQAGLSYLVNRNFGEKIGSDIVNVIDDPTLPNSSGFYLIDDEGIKARAKFLIKDGKINELLQDRFSAYKF
GVNSNGSARASRFDREPLVRMSNTFFMPSNFTFDELLEDVKDGIYLKSYMEWNIDDLRIGQRYIGLEAYEVRNGEIKEPL
LFPVIEGTTFEFLSSIDAIDNTLKFYYGTCGKGDPDQGIPVWMGGPNMRLRNISVKVRGYE

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=241, Percent_Identity=29.045643153527, Blast_Score=120, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 51690; Mature: 51690

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLNAILKKFSEFEYVEVREHKISSTHFFVINGSPAGLASVSHSGYSVRAFKDSVMYFTS
CCHHHHHHHHCCCCEEEHHHEECCCEEEEEEECCCCCCCEECCCCEEEEEEECEEEEEEC
SSDVKDLSPLSFSLKEWEKGYSLDQRTSGEYSVNEKEKIKDVPLEEKQKIFVNIANSLKN
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHEEHHHHHC
IKVNSKIVSVIFSYSESVEDKNILFEDGTTVHGLVPRIHVSASVSMVSDKASATFYEEFG
EEEHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCCEEEEEEEEEECCCCHHHHHHHHHC
GSGGFELIKIWDIENALAEKIRNVDEVLTKGKGVTPGRKDVIFSNMLSGIMAHESVGHPF
CCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
EADRVLGRESAQAGLSYLVNRNFGEKIGSDIVNVIDDPTLPNSSGFYLIDDEGIKARAKF
HHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEE
LIKDGKINELLQDRFSAYKFGVNSNGSARASRFDREPLVRMSNTFFMPSNFTFDELLEDV
EEECCCHHHHHHHHHHHEEECCCCCCCCHHHHCCCCCHHHHCCEEECCCCCCHHHHHHHH
KDGIYLKSYMEWNIDDLRIGQRYIGLEAYEVRNGEIKEPLLFPVIEGTTFEFLSSIDAID
HCCEEEEHHHCCCCCHHHHCHHHCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHH
NTLKFYYGTCGKGDPDQGIPVWMGGPNMRLRNISVKVRGYE
HHHEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MDLNAILKKFSEFEYVEVREHKISSTHFFVINGSPAGLASVSHSGYSVRAFKDSVMYFTS
CCHHHHHHHHCCCCEEEHHHEECCCEEEEEEECCCCCCCEECCCCEEEEEEECEEEEEEC
SSDVKDLSPLSFSLKEWEKGYSLDQRTSGEYSVNEKEKIKDVPLEEKQKIFVNIANSLKN
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHEEHHHHHC
IKVNSKIVSVIFSYSESVEDKNILFEDGTTVHGLVPRIHVSASVSMVSDKASATFYEEFG
EEEHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCCEEEEEEEEEECCCCHHHHHHHHHC
GSGGFELIKIWDIENALAEKIRNVDEVLTKGKGVTPGRKDVIFSNMLSGIMAHESVGHPF
CCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
EADRVLGRESAQAGLSYLVNRNFGEKIGSDIVNVIDDPTLPNSSGFYLIDDEGIKARAKF
HHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEE
LIKDGKINELLQDRFSAYKFGVNSNGSARASRFDREPLVRMSNTFFMPSNFTFDELLEDV
EEECCCHHHHHHHHHHHEEECCCCCCCCHHHHCCCCCHHHHCCEEECCCCCCHHHHHHHH
KDGIYLKSYMEWNIDDLRIGQRYIGLEAYEVRNGEIKEPLLFPVIEGTTFEFLSSIDAID
HCCEEEEHHHCCCCCHHHHCHHHCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHH
NTLKFYYGTCGKGDPDQGIPVWMGGPNMRLRNISVKVRGYE
HHHEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]