| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920887
Identifier: 15920887
GI number: 15920887
Start: 647886
End: 649142
Strand: Direct
Name: 15920887
Synonym: ST0665
Alternate gene names: NA
Gene position: 647886-649142 (Clockwise)
Preceding gene: 15920886
Following gene: 15920888
Centisome position: 24.04
GC content: 32.62
Gene sequence:
>1257_bases ATGAATGAGGAGCTAATTAAGTTAATGGAAAGTTTAAAAGGCTTTGATGAAGTTGGTATTCTTCAACTTAAGACTAGGAA ATTGTTAGTTAAGTTTGTTTACAGTGAAATTGTAGAAGTTCAAAGGCTTGTGAATACTGAATTAAATGTTATAGTAAGAA AAGGGAATAAGTATTTAGCAGTATCTTCAAATGGTGAGATAGATGTTGAAAAAATTAAGGAAATGTTTAATGTAGTCAAA GAAGCCTTCCTGACACCAGTTTTTAGTGATAATGACAGAGAGCTAAAATCTATCAGTTATTCTAATCTAAAAGATGTCAT AGAGAAAGGTGACATAAGTTCTATTGTTGAAGACATTTACTCCTCTGAGTTTCCACTATCTGGAGTACTTCAAGTGAGTG AGAATTCTATCTCTTTGGTTACTTCAAAAGGTTTTAACGGATTAACTGTAAAATATTCAGCGGATGGGTACTTTAGGGCT TTTAATAAGAACTATTCTGGCCAATGGGCTTTCTATTCAGATTCTTTATCACCTTTAAAGGACAGCATAAAACAAGCAAA TATCTTAGCTTCAATAGATGGAGAGACAAAGGTTTATGATGGAAAATACGATTTAGTGCTTTCACCGCTGGTTGTTGGAA ACTTAATGAGTGATTTCAGTTATTTCGCTTCAGCATTTAGTGTATATACTGGTTCGTCATTCCTATACAATGTAAAGCAA GGTGATAAGATAGCTAGCGAGAAGTTAAGTATTTACGATGTTCCTAATAAGTTAGGTATTAGAGAATTTGATGATGAAGC AACGTTTACTTATGATAAACCTTTAATAGAAAATGGTATATTTCAAACGTTACTTTATAATAATGAGCTGGCAAAACTAA TGAATGCTAAGTCAACTGGAAATGCTGGTATTATTTCTCCGGTTTCTTTCGGAATTGAAGTTAAAAGTGGTAACGTAAAG TTTGATTCTCTTCTTTCTGGTAATGTAATCTTTATCAATAATAATTGGTATACTAGGTATCAGAACTATCTAGAGGGAGC TTTCTCAACAGTTTGTAGGGATGCTGTAATTGTCTACAAAGATGGTAAACCCATAGGTAATGCTGGAAGGATTAGGATTT CTGATTATATTCCTAGAATTTTAAAAAACATAGAAGAAGTTTCTAAAGAGAGTTTTGCTGTGAAATGGTGGGATGCTCCA TTACCTACTATATCTCCCTTTATTTTAGTTAAGAATGTAAACATAACTAGGGCTTAG
Upstream 100 bases:
>100_bases TACGGTACCTGCGGAAAAGGAGATCCGGATCAAGGTATCCCAGTTTGGATGGGTGGGCCAAATATGAGATTAAGGAATAT TTCCGTAAAGGTGAGAGGTT
Downstream 100 bases:
>100_bases TATTTTTTTAATAGTTCAGACCCGAAACACTTATTAAATAACTATGAGAGAATATTTTATGGATAAAAGGAACATTATTC TTGCTATAGTTATGCTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Zinc-Dependent Protease; TldD/PmbA Family Protein; Zinc-Dependent Protease TldD/PmbA Family; TldE-Like Protein; PmbA Modulator Of DNA Gyrase; PmbA Protein; Zn-Dependent Protease
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MNEELIKLMESLKGFDEVGILQLKTRKLLVKFVYSEIVEVQRLVNTELNVIVRKGNKYLAVSSNGEIDVEKIKEMFNVVK EAFLTPVFSDNDRELKSISYSNLKDVIEKGDISSIVEDIYSSEFPLSGVLQVSENSISLVTSKGFNGLTVKYSADGYFRA FNKNYSGQWAFYSDSLSPLKDSIKQANILASIDGETKVYDGKYDLVLSPLVVGNLMSDFSYFASAFSVYTGSSFLYNVKQ GDKIASEKLSIYDVPNKLGIREFDDEATFTYDKPLIENGIFQTLLYNNELAKLMNAKSTGNAGIISPVSFGIEVKSGNVK FDSLLSGNVIFINNNWYTRYQNYLEGAFSTVCRDAVIVYKDGKPIGNAGRIRISDYIPRILKNIEEVSKESFAVKWWDAP LPTISPFILVKNVNITRA
Sequences:
>Translated_418_residues MNEELIKLMESLKGFDEVGILQLKTRKLLVKFVYSEIVEVQRLVNTELNVIVRKGNKYLAVSSNGEIDVEKIKEMFNVVK EAFLTPVFSDNDRELKSISYSNLKDVIEKGDISSIVEDIYSSEFPLSGVLQVSENSISLVTSKGFNGLTVKYSADGYFRA FNKNYSGQWAFYSDSLSPLKDSIKQANILASIDGETKVYDGKYDLVLSPLVVGNLMSDFSYFASAFSVYTGSSFLYNVKQ GDKIASEKLSIYDVPNKLGIREFDDEATFTYDKPLIENGIFQTLLYNNELAKLMNAKSTGNAGIISPVSFGIEVKSGNVK FDSLLSGNVIFINNNWYTRYQNYLEGAFSTVCRDAVIVYKDGKPIGNAGRIRISDYIPRILKNIEEVSKESFAVKWWDAP LPTISPFILVKNVNITRA >Mature_418_residues MNEELIKLMESLKGFDEVGILQLKTRKLLVKFVYSEIVEVQRLVNTELNVIVRKGNKYLAVSSNGEIDVEKIKEMFNVVK EAFLTPVFSDNDRELKSISYSNLKDVIEKGDISSIVEDIYSSEFPLSGVLQVSENSISLVTSKGFNGLTVKYSADGYFRA FNKNYSGQWAFYSDSLSPLKDSIKQANILASIDGETKVYDGKYDLVLSPLVVGNLMSDFSYFASAFSVYTGSSFLYNVKQ GDKIASEKLSIYDVPNKLGIREFDDEATFTYDKPLIENGIFQTLLYNNELAKLMNAKSTGNAGIISPVSFGIEVKSGNVK FDSLLSGNVIFINNNWYTRYQNYLEGAFSTVCRDAVIVYKDGKPIGNAGRIRISDYIPRILKNIEEVSKESFAVKWWDAP LPTISPFILVKNVNITRA
Specific function: Unknown
COG id: COG0312
COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46852; Mature: 46852
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEELIKLMESLKGFDEVGILQLKTRKLLVKFVYSEIVEVQRLVNTELNVIVRKGNKYLA CCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEE VSSNGEIDVEKIKEMFNVVKEAFLTPVFSDNDRELKSISYSNLKDVIEKGDISSIVEDIY ECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHH SSEFPLSGVLQVSENSISLVTSKGFNGLTVKYSADGYFRAFNKNYSGQWAFYSDSLSPLK CCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCCCEEEECCCCHHHH DSIKQANILASIDGETKVYDGKYDLVLSPLVVGNLMSDFSYFASAFSVYTGSSFLYNVKQ HHHHHCCEEEEECCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC GDKIASEKLSIYDVPNKLGIREFDDEATFTYDKPLIENGIFQTLLYNNELAKLMNAKSTG CCHHHHCCEEEEECCCCCCCEECCCCCCEEECCHHHHCCHHHHHHHHHHHHHHHCCCCCC NAGIISPVSFGIEVKSGNVKFDSLLSGNVIFINNNWYTRYQNYLEGAFSTVCRDAVIVYK CCCEECEEEEEEEEECCCEEEHHEECCCEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEE DGKPIGNAGRIRISDYIPRILKNIEEVSKESFAVKWWDAPLPTISPFILVKNVNITRA CCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECEEECC >Mature Secondary Structure MNEELIKLMESLKGFDEVGILQLKTRKLLVKFVYSEIVEVQRLVNTELNVIVRKGNKYLA CCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEE VSSNGEIDVEKIKEMFNVVKEAFLTPVFSDNDRELKSISYSNLKDVIEKGDISSIVEDIY ECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHH SSEFPLSGVLQVSENSISLVTSKGFNGLTVKYSADGYFRAFNKNYSGQWAFYSDSLSPLK CCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCCCEEEECCCCHHHH DSIKQANILASIDGETKVYDGKYDLVLSPLVVGNLMSDFSYFASAFSVYTGSSFLYNVKQ HHHHHCCEEEEECCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC GDKIASEKLSIYDVPNKLGIREFDDEATFTYDKPLIENGIFQTLLYNNELAKLMNAKSTG CCHHHHCCEEEEECCCCCCCEECCCCCCEEECCHHHHCCHHHHHHHHHHHHHHHCCCCCC NAGIISPVSFGIEVKSGNVKFDSLLSGNVIFINNNWYTRYQNYLEGAFSTVCRDAVIVYK CCCEECEEEEEEEEECCCEEEHHEECCCEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEE DGKPIGNAGRIRISDYIPRILKNIEEVSKESFAVKWWDAPLPTISPFILVKNVNITRA CCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA