Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

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The map label for this gene is 15920887

Identifier: 15920887

GI number: 15920887

Start: 647886

End: 649142

Strand: Direct

Name: 15920887

Synonym: ST0665

Alternate gene names: NA

Gene position: 647886-649142 (Clockwise)

Preceding gene: 15920886

Following gene: 15920888

Centisome position: 24.04

GC content: 32.62

Gene sequence:

>1257_bases
ATGAATGAGGAGCTAATTAAGTTAATGGAAAGTTTAAAAGGCTTTGATGAAGTTGGTATTCTTCAACTTAAGACTAGGAA
ATTGTTAGTTAAGTTTGTTTACAGTGAAATTGTAGAAGTTCAAAGGCTTGTGAATACTGAATTAAATGTTATAGTAAGAA
AAGGGAATAAGTATTTAGCAGTATCTTCAAATGGTGAGATAGATGTTGAAAAAATTAAGGAAATGTTTAATGTAGTCAAA
GAAGCCTTCCTGACACCAGTTTTTAGTGATAATGACAGAGAGCTAAAATCTATCAGTTATTCTAATCTAAAAGATGTCAT
AGAGAAAGGTGACATAAGTTCTATTGTTGAAGACATTTACTCCTCTGAGTTTCCACTATCTGGAGTACTTCAAGTGAGTG
AGAATTCTATCTCTTTGGTTACTTCAAAAGGTTTTAACGGATTAACTGTAAAATATTCAGCGGATGGGTACTTTAGGGCT
TTTAATAAGAACTATTCTGGCCAATGGGCTTTCTATTCAGATTCTTTATCACCTTTAAAGGACAGCATAAAACAAGCAAA
TATCTTAGCTTCAATAGATGGAGAGACAAAGGTTTATGATGGAAAATACGATTTAGTGCTTTCACCGCTGGTTGTTGGAA
ACTTAATGAGTGATTTCAGTTATTTCGCTTCAGCATTTAGTGTATATACTGGTTCGTCATTCCTATACAATGTAAAGCAA
GGTGATAAGATAGCTAGCGAGAAGTTAAGTATTTACGATGTTCCTAATAAGTTAGGTATTAGAGAATTTGATGATGAAGC
AACGTTTACTTATGATAAACCTTTAATAGAAAATGGTATATTTCAAACGTTACTTTATAATAATGAGCTGGCAAAACTAA
TGAATGCTAAGTCAACTGGAAATGCTGGTATTATTTCTCCGGTTTCTTTCGGAATTGAAGTTAAAAGTGGTAACGTAAAG
TTTGATTCTCTTCTTTCTGGTAATGTAATCTTTATCAATAATAATTGGTATACTAGGTATCAGAACTATCTAGAGGGAGC
TTTCTCAACAGTTTGTAGGGATGCTGTAATTGTCTACAAAGATGGTAAACCCATAGGTAATGCTGGAAGGATTAGGATTT
CTGATTATATTCCTAGAATTTTAAAAAACATAGAAGAAGTTTCTAAAGAGAGTTTTGCTGTGAAATGGTGGGATGCTCCA
TTACCTACTATATCTCCCTTTATTTTAGTTAAGAATGTAAACATAACTAGGGCTTAG

Upstream 100 bases:

>100_bases
TACGGTACCTGCGGAAAAGGAGATCCGGATCAAGGTATCCCAGTTTGGATGGGTGGGCCAAATATGAGATTAAGGAATAT
TTCCGTAAAGGTGAGAGGTT

Downstream 100 bases:

>100_bases
TATTTTTTTAATAGTTCAGACCCGAAACACTTATTAAATAACTATGAGAGAATATTTTATGGATAAAAGGAACATTATTC
TTGCTATAGTTATGCTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Zinc-Dependent Protease; TldD/PmbA Family Protein; Zinc-Dependent Protease TldD/PmbA Family; TldE-Like Protein; PmbA Modulator Of DNA Gyrase; PmbA Protein; Zn-Dependent Protease

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNEELIKLMESLKGFDEVGILQLKTRKLLVKFVYSEIVEVQRLVNTELNVIVRKGNKYLAVSSNGEIDVEKIKEMFNVVK
EAFLTPVFSDNDRELKSISYSNLKDVIEKGDISSIVEDIYSSEFPLSGVLQVSENSISLVTSKGFNGLTVKYSADGYFRA
FNKNYSGQWAFYSDSLSPLKDSIKQANILASIDGETKVYDGKYDLVLSPLVVGNLMSDFSYFASAFSVYTGSSFLYNVKQ
GDKIASEKLSIYDVPNKLGIREFDDEATFTYDKPLIENGIFQTLLYNNELAKLMNAKSTGNAGIISPVSFGIEVKSGNVK
FDSLLSGNVIFINNNWYTRYQNYLEGAFSTVCRDAVIVYKDGKPIGNAGRIRISDYIPRILKNIEEVSKESFAVKWWDAP
LPTISPFILVKNVNITRA

Sequences:

>Translated_418_residues
MNEELIKLMESLKGFDEVGILQLKTRKLLVKFVYSEIVEVQRLVNTELNVIVRKGNKYLAVSSNGEIDVEKIKEMFNVVK
EAFLTPVFSDNDRELKSISYSNLKDVIEKGDISSIVEDIYSSEFPLSGVLQVSENSISLVTSKGFNGLTVKYSADGYFRA
FNKNYSGQWAFYSDSLSPLKDSIKQANILASIDGETKVYDGKYDLVLSPLVVGNLMSDFSYFASAFSVYTGSSFLYNVKQ
GDKIASEKLSIYDVPNKLGIREFDDEATFTYDKPLIENGIFQTLLYNNELAKLMNAKSTGNAGIISPVSFGIEVKSGNVK
FDSLLSGNVIFINNNWYTRYQNYLEGAFSTVCRDAVIVYKDGKPIGNAGRIRISDYIPRILKNIEEVSKESFAVKWWDAP
LPTISPFILVKNVNITRA
>Mature_418_residues
MNEELIKLMESLKGFDEVGILQLKTRKLLVKFVYSEIVEVQRLVNTELNVIVRKGNKYLAVSSNGEIDVEKIKEMFNVVK
EAFLTPVFSDNDRELKSISYSNLKDVIEKGDISSIVEDIYSSEFPLSGVLQVSENSISLVTSKGFNGLTVKYSADGYFRA
FNKNYSGQWAFYSDSLSPLKDSIKQANILASIDGETKVYDGKYDLVLSPLVVGNLMSDFSYFASAFSVYTGSSFLYNVKQ
GDKIASEKLSIYDVPNKLGIREFDDEATFTYDKPLIENGIFQTLLYNNELAKLMNAKSTGNAGIISPVSFGIEVKSGNVK
FDSLLSGNVIFINNNWYTRYQNYLEGAFSTVCRDAVIVYKDGKPIGNAGRIRISDYIPRILKNIEEVSKESFAVKWWDAP
LPTISPFILVKNVNITRA

Specific function: Unknown

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46852; Mature: 46852

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEELIKLMESLKGFDEVGILQLKTRKLLVKFVYSEIVEVQRLVNTELNVIVRKGNKYLA
CCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEE
VSSNGEIDVEKIKEMFNVVKEAFLTPVFSDNDRELKSISYSNLKDVIEKGDISSIVEDIY
ECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHH
SSEFPLSGVLQVSENSISLVTSKGFNGLTVKYSADGYFRAFNKNYSGQWAFYSDSLSPLK
CCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCCCEEEECCCCHHHH
DSIKQANILASIDGETKVYDGKYDLVLSPLVVGNLMSDFSYFASAFSVYTGSSFLYNVKQ
HHHHHCCEEEEECCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
GDKIASEKLSIYDVPNKLGIREFDDEATFTYDKPLIENGIFQTLLYNNELAKLMNAKSTG
CCHHHHCCEEEEECCCCCCCEECCCCCCEEECCHHHHCCHHHHHHHHHHHHHHHCCCCCC
NAGIISPVSFGIEVKSGNVKFDSLLSGNVIFINNNWYTRYQNYLEGAFSTVCRDAVIVYK
CCCEECEEEEEEEEECCCEEEHHEECCCEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEE
DGKPIGNAGRIRISDYIPRILKNIEEVSKESFAVKWWDAPLPTISPFILVKNVNITRA
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECEEECC
>Mature Secondary Structure
MNEELIKLMESLKGFDEVGILQLKTRKLLVKFVYSEIVEVQRLVNTELNVIVRKGNKYLA
CCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEE
VSSNGEIDVEKIKEMFNVVKEAFLTPVFSDNDRELKSISYSNLKDVIEKGDISSIVEDIY
ECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHH
SSEFPLSGVLQVSENSISLVTSKGFNGLTVKYSADGYFRAFNKNYSGQWAFYSDSLSPLK
CCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCCCEEEECCCCHHHH
DSIKQANILASIDGETKVYDGKYDLVLSPLVVGNLMSDFSYFASAFSVYTGSSFLYNVKQ
HHHHHCCEEEEECCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
GDKIASEKLSIYDVPNKLGIREFDDEATFTYDKPLIENGIFQTLLYNNELAKLMNAKSTG
CCHHHHCCEEEEECCCCCCCEECCCCCCEEECCHHHHCCHHHHHHHHHHHHHHHCCCCCC
NAGIISPVSFGIEVKSGNVKFDSLLSGNVIFINNNWYTRYQNYLEGAFSTVCRDAVIVYK
CCCEECEEEEEEEEECCCEEEHHEECCCEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEE
DGKPIGNAGRIRISDYIPRILKNIEEVSKESFAVKWWDAPLPTISPFILVKNVNITRA
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA