| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yoaE [H]
Identifier: 15920859
GI number: 15920859
Start: 623442
End: 625193
Strand: Direct
Name: yoaE [H]
Synonym: ST0639
Alternate gene names: 15920859
Gene position: 623442-625193 (Clockwise)
Preceding gene: 15920858
Following gene: 15920860
Centisome position: 23.14
GC content: 33.73
Gene sequence:
>1752_bases ATGATTGCATGTACAAGGGACTGTTATGATACTTGTATATTTGATTCTAATTATAAACCTTTGAACATTTTCCCTATAAA CGGATTTACTTGTTCTAGAGGAATTGCAGATTTAAAAAGAAATGAGATTAACAGAGTGGACTCCGCTTACATAGAGGGTA AGCCTGTTTCTATAGATGAAGCCGTAAAGTATATAGTAAAAAAGATAAAAGAAACTAAAAGAGAAGAAATTCTTCATATT GACTATGACGGCAATCAAGGACTATTAACATGGTACTATCCTGCAAGATTTTGGAATGCAATTGGTTCATCATCTACTGA CTATTCAATTTGCTCTGCTGAAGGGCACGAAGCTATTAAGATTCACTACGGTACTTCTTTTGGTGCGTTACCAGAAGATT TTGTTAGATATAACGCTGTAGTCTTTTGGGGATCAGAAGCCGTTTTCTCTTTTATTCATGGATGGAGAATTCTATCTAAT AAATACAAGATAACAATTGATGTAAGAATGAGTGAAACCGCAAAAAGAAGTGAAAAAGCCTATATCATAAACCCAGCTTC AGATGCGTTTTTAGCAATTGGTGTTATTAAAACGTTATTTTATGAAGGTCTTTATGATCCTTCAATGATTGATAACGTCG AAATTCTAAAGAATTATGTAAATTCTTATGATTTCTCGTTGATAGAAGAGACTACTGGTTTATCTCAGGAGGAAATTGAA GAGTTAGCTGAACTTTATTACTATTATAAACCCTTAACAATAATTGGTTTCGCTTTAGGAAGAACATATAATGGCGGTGA TGCTATCTCATTAATTTCTTTGATTCCCGCTTTATTGGGCATGAAAAGAGGATTCTTTTACTCAAACAGTCAAGGATGGG GAATAGACTTCTCCTATCTTCGCGGGTTGCATATAGCAAAACCAAGCAGAATTATAGGTATGGCTGAAGTAGGGAAAGAA GTTGAAAAAGGAAATGTAAAGTTTCTATTCACTTGGAACTCTAATCCTATTCATTCTTTGCCAGGAAGTGATAAAATAAA AGAAGCTGTCGAAGAAGGAAAGTTGTTTTTAGTTTCTCATGATCCCTTTTGGAATGAGACCACAAAAATAGCAAATGTTG TTATTCCAGCACCAACTTTTTTAGAAAAGTATGATGTAGTATATAGTTATTGGCACAGCTATCTAGTCTATAACGAACCT ATTAGACCACAAAGAGGGATTACTGAAGTTGAATTGATGAAAAAGCTTGCAAAAGAATATGGGATTATTTCTCATCCTCT CATTGAGGAAAACGAATGGATTGCTGTAGATAACGCAATAAGAGGTACTGGAGTTTCTTTACAAGAATTAAAAGACAAGA AGATAGTTAAAATGAATAAGACTATTGAAGTTAACAAAGTTAAAGTTGAGCCTCTACCCAAACTAACTCCTCCTCCTAAG GGAGTTTACTTGGTCTTCTCTTCACATCCTAACCATACAAATTCTCAATTTAAGGAAATATACTCTCAGATGCCTATAGC ATATAATAATCAACTTGATGGTATAGGTTATCTAGAAAATTCCAATGGGAAAGTTAAAGTACTTCTGAAAAAGGATGAGA GCGTACCCAACAATGTAGTTTTCATGTTTAAGAGTTCCTTAATTGGATTAGATGACAAGCCAATCAACTCGCTTATTGGT AGTGAAAAAGGAAAATATGGAGGAACTCCATTACTTAACGGGCATACTGTTAATATTAGATTAATAAAATAA
Upstream 100 bases:
>100_bases AATGGATTTTAGAGCATTCAGCTTAAAGGAATTTCTTCACCATTCAGTTACGGTCGCACACATCACTAAGTTTTAATATA TACTAGACTATAAAAGAATA
Downstream 100 bases:
>100_bases ATGTTATACTATTGAATAACTATTATATTGTAATACCACAAATAAAAGCATAATCTTAATTAATTACTGTAGTCAGACAT AATCTTGACCAGAAATGGTA
Product: hypothetical protein
Products: CO2; NADH; H2 [C]
Alternate protein names: NA
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MIACTRDCYDTCIFDSNYKPLNIFPINGFTCSRGIADLKRNEINRVDSAYIEGKPVSIDEAVKYIVKKIKETKREEILHI DYDGNQGLLTWYYPARFWNAIGSSSTDYSICSAEGHEAIKIHYGTSFGALPEDFVRYNAVVFWGSEAVFSFIHGWRILSN KYKITIDVRMSETAKRSEKAYIINPASDAFLAIGVIKTLFYEGLYDPSMIDNVEILKNYVNSYDFSLIEETTGLSQEEIE ELAELYYYYKPLTIIGFALGRTYNGGDAISLISLIPALLGMKRGFFYSNSQGWGIDFSYLRGLHIAKPSRIIGMAEVGKE VEKGNVKFLFTWNSNPIHSLPGSDKIKEAVEEGKLFLVSHDPFWNETTKIANVVIPAPTFLEKYDVVYSYWHSYLVYNEP IRPQRGITEVELMKKLAKEYGIISHPLIEENEWIAVDNAIRGTGVSLQELKDKKIVKMNKTIEVNKVKVEPLPKLTPPPK GVYLVFSSHPNHTNSQFKEIYSQMPIAYNNQLDGIGYLENSNGKVKVLLKKDESVPNNVVFMFKSSLIGLDDKPINSLIG SEKGKYGGTPLLNGHTVNIRLIK
Sequences:
>Translated_583_residues MIACTRDCYDTCIFDSNYKPLNIFPINGFTCSRGIADLKRNEINRVDSAYIEGKPVSIDEAVKYIVKKIKETKREEILHI DYDGNQGLLTWYYPARFWNAIGSSSTDYSICSAEGHEAIKIHYGTSFGALPEDFVRYNAVVFWGSEAVFSFIHGWRILSN KYKITIDVRMSETAKRSEKAYIINPASDAFLAIGVIKTLFYEGLYDPSMIDNVEILKNYVNSYDFSLIEETTGLSQEEIE ELAELYYYYKPLTIIGFALGRTYNGGDAISLISLIPALLGMKRGFFYSNSQGWGIDFSYLRGLHIAKPSRIIGMAEVGKE VEKGNVKFLFTWNSNPIHSLPGSDKIKEAVEEGKLFLVSHDPFWNETTKIANVVIPAPTFLEKYDVVYSYWHSYLVYNEP IRPQRGITEVELMKKLAKEYGIISHPLIEENEWIAVDNAIRGTGVSLQELKDKKIVKMNKTIEVNKVKVEPLPKLTPPPK GVYLVFSSHPNHTNSQFKEIYSQMPIAYNNQLDGIGYLENSNGKVKVLLKKDESVPNNVVFMFKSSLIGLDDKPINSLIG SEKGKYGGTPLLNGHTVNIRLIK >Mature_583_residues MIACTRDCYDTCIFDSNYKPLNIFPINGFTCSRGIADLKRNEINRVDSAYIEGKPVSIDEAVKYIVKKIKETKREEILHI DYDGNQGLLTWYYPARFWNAIGSSSTDYSICSAEGHEAIKIHYGTSFGALPEDFVRYNAVVFWGSEAVFSFIHGWRILSN KYKITIDVRMSETAKRSEKAYIINPASDAFLAIGVIKTLFYEGLYDPSMIDNVEILKNYVNSYDFSLIEETTGLSQEEIE ELAELYYYYKPLTIIGFALGRTYNGGDAISLISLIPALLGMKRGFFYSNSQGWGIDFSYLRGLHIAKPSRIIGMAEVGKE VEKGNVKFLFTWNSNPIHSLPGSDKIKEAVEEGKLFLVSHDPFWNETTKIANVVIPAPTFLEKYDVVYSYWHSYLVYNEP IRPQRGITEVELMKKLAKEYGIISHPLIEENEWIAVDNAIRGTGVSLQELKDKKIVKMNKTIEVNKVKVEPLPKLTPPPK GVYLVFSSHPNHTNSQFKEIYSQMPIAYNNQLDGIGYLENSNGKVKVLLKKDESVPNNVVFMFKSSLIGLDDKPINSLIG SEKGKYGGTPLLNGHTVNIRLIK
Specific function: Decomposes Formic Acid To Hydrogen And Carbon Dioxide Under Anaerobic Conditions In The Absence Of Exogenous Electron Acceptors. [C]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.2.1.2 [C]
Molecular weight: Translated: 65990; Mature: 65990
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIACTRDCYDTCIFDSNYKPLNIFPINGFTCSRGIADLKRNEINRVDSAYIEGKPVSIDE CCCCCCCHHHHHEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHH AVKYIVKKIKETKREEILHIDYDGNQGLLTWYYPARFWNAIGSSSTDYSICSAEGHEAIK HHHHHHHHHHHHHHHCEEEEEECCCCCEEEEECHHHHHHHHCCCCCCCEEEECCCCCEEE IHYGTSFGALPEDFVRYNAVVFWGSEAVFSFIHGWRILSNKYKITIDVRMSETAKRSEKA EEECCCCCCCCHHHHHEEEEEEECCHHHHHHHHHHHEECCCEEEEEEEEECCHHHCCCCE YIINPASDAFLAIGVIKTLFYEGLYDPSMIDNVEILKNYVNSYDFSLIEETTGLSQEEIE EEECCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCCCEEHHHHCCCCHHHHH ELAELYYYYKPLTIIGFALGRTYNGGDAISLISLIPALLGMKRGFFYSNSQGWGIDFSYL HHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHH RGLHIAKPSRIIGMAEVGKEVEKGNVKFLFTWNSNPIHSLPGSDKIKEAVEEGKLFLVSH CCEEECCCCCEEEHHHHCCHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEEC DPFWNETTKIANVVIPAPTFLEKYDVVYSYWHSYLVYNEPIRPQRGITEVELMKKLAKEY CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHC GIISHPLIEENEWIAVDNAIRGTGVSLQELKDKKIVKMNKTIEVNKVKVEPLPKLTPPPK CCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCEEEECCEEEEEEEEECCCCCCCCCCC GVYLVFSSHPNHTNSQFKEIYSQMPIAYNNQLDGIGYLENSNGKVKVLLKKDESVPNNVV CEEEEEECCCCCCHHHHHHHHHHCCEEECCCCCCEEEEECCCCEEEEEEECCCCCCCCEE FMFKSSLIGLDDKPINSLIGSEKGKYGGTPLLNGHTVNIRLIK EEEECCCCCCCCCCHHHHHCCCCCCCCCCCEECCEEEEEEEEC >Mature Secondary Structure MIACTRDCYDTCIFDSNYKPLNIFPINGFTCSRGIADLKRNEINRVDSAYIEGKPVSIDE CCCCCCCHHHHHEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHH AVKYIVKKIKETKREEILHIDYDGNQGLLTWYYPARFWNAIGSSSTDYSICSAEGHEAIK HHHHHHHHHHHHHHHCEEEEEECCCCCEEEEECHHHHHHHHCCCCCCCEEEECCCCCEEE IHYGTSFGALPEDFVRYNAVVFWGSEAVFSFIHGWRILSNKYKITIDVRMSETAKRSEKA EEECCCCCCCCHHHHHEEEEEEECCHHHHHHHHHHHEECCCEEEEEEEEECCHHHCCCCE YIINPASDAFLAIGVIKTLFYEGLYDPSMIDNVEILKNYVNSYDFSLIEETTGLSQEEIE EEECCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHCCCCCEEHHHHCCCCHHHHH ELAELYYYYKPLTIIGFALGRTYNGGDAISLISLIPALLGMKRGFFYSNSQGWGIDFSYL HHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHH RGLHIAKPSRIIGMAEVGKEVEKGNVKFLFTWNSNPIHSLPGSDKIKEAVEEGKLFLVSH CCEEECCCCCEEEHHHHCCHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEEC DPFWNETTKIANVVIPAPTFLEKYDVVYSYWHSYLVYNEPIRPQRGITEVELMKKLAKEY CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHC GIISHPLIEENEWIAVDNAIRGTGVSLQELKDKKIVKMNKTIEVNKVKVEPLPKLTPPPK CCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCEEEECCEEEEEEEEECCCCCCCCCCC GVYLVFSSHPNHTNSQFKEIYSQMPIAYNNQLDGIGYLENSNGKVKVLLKKDESVPNNVV CEEEEEECCCCCCHHHHHHHHHHCCEEECCCCCCEEEEECCCCEEEEEEECCCCCCCCEE FMFKSSLIGLDDKPINSLIGSEKGKYGGTPLLNGHTVNIRLIK EEEECCCCCCCCCCHHHHHCCCCCCCCCCCEECCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NAD+ [C]
Metal ions: Fe; Mo; Se [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.19 {3-pyridinecarboxaldehyde-NAD+}} 0.032 {NAD+}} 1.16 {3-acetylpyridine-NAD+}} 0.54 {deamino-NAD+}} 0.17 {thio-NAD+}} [C]
Substrates: Formate; NAD(+) [C]
Specific reaction: Formate + NAD(+) = CO2 + NADH. formate = CO2 + H2 [C]
General reaction: Redox reaction [C]
Inhibitor: Azide; Br-; Cl-; CN-; F-; HCO3-; HCOS-; NO2-; NO3-; OCN-; SCN- [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]