Click here to switch to the map view.

The map label for this gene is ydaO [C]

Identifier: 15920850

GI number: 15920850

Start: 615629

End: 616585

Strand: Reverse

Name: ydaO [C]

Synonym: ST0630

Alternate gene names: 15920850

Gene position: 616585-615629 (Counterclockwise)

Preceding gene: 15920853

Following gene: 15920849

Centisome position: 22.88

GC content: 32.92

Gene sequence:

>957_bases
ATGAAATGCAGTAAGTGTAATAATAAGGCTATTATAAAAATCCCTTATTCTAATCTGGCATTATGTAAAGATCACTTTAT
TGAGTGGTTTGAAAGAAGATTTGAGAGGATAGTTGATAAGTATAAGATGTTTGAAAACTCAAAGAAAATAGCTGTAGCAG
TTTCTGGGGGAAAAGATAGTACGACTTTGCTTCATTTAATGAAGAAGCTGAGTGAAAAGAAGGGGTTTGAAATAATCGGT
ATAAACATTGATTTAGGTATAGATATGGGTAAACAATATTCCTCAAAGAGTACAGAGTTTGCTTTAAAGAATTTCGAAAT
GTTAGGTGTTAAATACAGAATTGTAAGGATAAAAGAGAGGTATGGGTTTACAATTGATGACGCAAAGCATAAGATAAAAA
GACCCGTATGCAGTACTTGTGGATTAGTAAAAAGGTATACTCTAACAGAAATTGCAGAAGAAGAAGGAGCAGATACGATA
GTGACTGGCCATAATTTAAATGATATGGCACAATTTATAATGGCTGGATATTTTAATGGTGATGTAAGAGATTTAGCAAG
ACTAGATATCATAACTCCACCAGAAAAGGGATATAAAGTAACGAAAGTTAAACCACTCTTCCTAATTTATGAGAAAGAAA
TTTTAACTTATGCCTTAGTAAAAGGAATTCCGTTCCTATATGATTCATGCCCTCATACATTCAGAGTTGGTGGTGCTACT
CAAGATACCATAAGGAGAAAATTAGAAGAGCTCGAAGAGGCAATACCAGGTTATATGTTAATGTTAGTAGAGAATTTCAT
AAATAAAATTCAACCAGCTTTAAAGGAGAAGTATATAAAAGAGGAAGAAATAGGCCATTGTAAGATTTGCGGTAGGCCCA
CAACTAAGGATAGAGAAATCTGCTCATTTTGTGCAGTAAGGTTAAAAATGACTGGACAGACAATTAATATAAAATGA

Upstream 100 bases:

>100_bases
CCTTAATTTCTCTCTCTATCTTTTCTATCTTAGTCTTCGGATGTAATTCGACCAGAATTTCCATCATTAACTTAAAAGGA
TAAAAGTATTATAAAGCATT

Downstream 100 bases:

>100_bases
AAGTTAAAATATTTTTACATTATCCCGATGATACACCTGCTGGTTATGTTATATTTGACGGAAAAACATCAAAGGTTTAC
GATGAAAATGGTAATTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKCSKCNNKAIIKIPYSNLALCKDHFIEWFERRFERIVDKYKMFENSKKIAVAVSGGKDSTTLLHLMKKLSEKKGFEIIG
INIDLGIDMGKQYSSKSTEFALKNFEMLGVKYRIVRIKERYGFTIDDAKHKIKRPVCSTCGLVKRYTLTEIAEEEGADTI
VTGHNLNDMAQFIMAGYFNGDVRDLARLDIITPPEKGYKVTKVKPLFLIYEKEILTYALVKGIPFLYDSCPHTFRVGGAT
QDTIRRKLEELEEAIPGYMLMLVENFINKIQPALKEKYIKEEEIGHCKICGRPTTKDREICSFCAVRLKMTGQTINIK

Sequences:

>Translated_318_residues
MKCSKCNNKAIIKIPYSNLALCKDHFIEWFERRFERIVDKYKMFENSKKIAVAVSGGKDSTTLLHLMKKLSEKKGFEIIG
INIDLGIDMGKQYSSKSTEFALKNFEMLGVKYRIVRIKERYGFTIDDAKHKIKRPVCSTCGLVKRYTLTEIAEEEGADTI
VTGHNLNDMAQFIMAGYFNGDVRDLARLDIITPPEKGYKVTKVKPLFLIYEKEILTYALVKGIPFLYDSCPHTFRVGGAT
QDTIRRKLEELEEAIPGYMLMLVENFINKIQPALKEKYIKEEEIGHCKICGRPTTKDREICSFCAVRLKMTGQTINIK
>Mature_318_residues
MKCSKCNNKAIIKIPYSNLALCKDHFIEWFERRFERIVDKYKMFENSKKIAVAVSGGKDSTTLLHLMKKLSEKKGFEIIG
INIDLGIDMGKQYSSKSTEFALKNFEMLGVKYRIVRIKERYGFTIDDAKHKIKRPVCSTCGLVKRYTLTEIAEEEGADTI
VTGHNLNDMAQFIMAGYFNGDVRDLARLDIITPPEKGYKVTKVKPLFLIYEKEILTYALVKGIPFLYDSCPHTFRVGGAT
QDTIRRKLEELEEAIPGYMLMLVENFINKIQPALKEKYIKEEEIGHCKICGRPTTKDREICSFCAVRLKMTGQTINIK

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=315, Percent_Identity=28.5714285714286, Blast_Score=119, Evalue=5e-27,
Organism=Escherichia coli, GI1787606, Length=200, Percent_Identity=30, Blast_Score=72, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17540090, Length=308, Percent_Identity=30.8441558441558, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI193211090, Length=281, Percent_Identity=23.8434163701068, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6321227, Length=150, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24651972, Length=309, Percent_Identity=32.3624595469256, Blast_Score=142, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 36485; Mature: 36485

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS01263 UPF0021

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCSKCNNKAIIKIPYSNLALCKDHFIEWFERRFERIVDKYKMFENSKKIAVAVSGGKDS
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCH
TTLLHLMKKLSEKKGFEIIGINIDLGIDMGKQYSSKSTEFALKNFEMLGVKYRIVRIKER
HHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCEEEEEEEEHHH
YGFTIDDAKHKIKRPVCSTCGLVKRYTLTEIAEEEGADTIVTGHNLNDMAQFIMAGYFNG
CCCEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCC
DVRDLARLDIITPPEKGYKVTKVKPLFLIYEKEILTYALVKGIPFLYDSCPHTFRVGGAT
CHHHHHHHCCCCCCCCCEEEEEECEEEEEEHHHHHHHHHHHCCHHHHHCCCCEEEECCCC
QDTIRRKLEELEEAIPGYMLMLVENFINKIQPALKEKYIKEEEIGHCKICGRPTTKDREI
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHH
CSFCAVRLKMTGQTINIK
HHHHHHHHEECCCEEECC
>Mature Secondary Structure
MKCSKCNNKAIIKIPYSNLALCKDHFIEWFERRFERIVDKYKMFENSKKIAVAVSGGKDS
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCH
TTLLHLMKKLSEKKGFEIIGINIDLGIDMGKQYSSKSTEFALKNFEMLGVKYRIVRIKER
HHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCEEEEEEEEHHH
YGFTIDDAKHKIKRPVCSTCGLVKRYTLTEIAEEEGADTIVTGHNLNDMAQFIMAGYFNG
CCCEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCC
DVRDLARLDIITPPEKGYKVTKVKPLFLIYEKEILTYALVKGIPFLYDSCPHTFRVGGAT
CHHHHHHHCCCCCCCCCEEEEEECEEEEEEHHHHHHHHHHHCCHHHHHCCCCEEEECCCC
QDTIRRKLEELEEAIPGYMLMLVENFINKIQPALKEKYIKEEEIGHCKICGRPTTKDREI
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHH
CSFCAVRLKMTGQTINIK
HHHHHHHHEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]