Click here to switch to the map view.

The map label for this gene is 15920824

Identifier: 15920824

GI number: 15920824

Start: 590618

End: 591061

Strand: Reverse

Name: 15920824

Synonym: ST0604

Alternate gene names: NA

Gene position: 591061-590618 (Counterclockwise)

Preceding gene: 15920825

Following gene: 15920822

Centisome position: 21.93

GC content: 30.63

Gene sequence:

>444_bases
ATGTATTGGCTAATTCCAGTGCAAGAAGATTTTTGGGAGACGGTAGTAAAAACAAACCTCTTTGGTTTTCATAAAGAATC
TGTTGAGAAATACATCAAACCAGGTGATTTTATAATATTTTATGTGGGTAAATACTATGCTAAAAAATACGGAGGTAAAT
TCGTAGGAATATTTAAAGTAATTTCTGATTGGTTTTATGATGAAACAGTAGTCTTTCCCAATGAAAAGCTCGTAGGTAAA
GCTATTGAAGTTTATAGAATAAAGCTAGAACCAATAATCATAGGCGAATGTCCTTCTAAAGATATTATCTGGAATCTTTC
ATTCATAGAAGATAAATTTCAATTTTCTAAGTATCTAAGGAATGTTCCAGCAAATTTGAAAAGACCTATCCCAGAAGAGG
ATGCTAAAAAAATTGAGGAATGCTTAAAAGCCTCTATAATTTAA

Upstream 100 bases:

>100_bases
ATAAAGTTTCCTAAAAATACAACTCCCACAATTTCACCTCTTGTTTTCAAACGGTAGTATTACAGTACTTTTATATAGCC
TAACTGAGAGTTAAAAATTG

Downstream 100 bases:

>100_bases
CTCTCTTAACACCACATTTATTAGGTTTATTAATTCTGACAGAAGTTTATTAACTATATATTTGTATATAAAGATAATCA
CATATCTTATATTGATGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MYWLIPVQEDFWETVVKTNLFGFHKESVEKYIKPGDFIIFYVGKYYAKKYGGKFVGIFKVISDWFYDETVVFPNEKLVGK
AIEVYRIKLEPIIIGECPSKDIIWNLSFIEDKFQFSKYLRNVPANLKRPIPEEDAKKIEECLKASII

Sequences:

>Translated_147_residues
MYWLIPVQEDFWETVVKTNLFGFHKESVEKYIKPGDFIIFYVGKYYAKKYGGKFVGIFKVISDWFYDETVVFPNEKLVGK
AIEVYRIKLEPIIIGECPSKDIIWNLSFIEDKFQFSKYLRNVPANLKRPIPEEDAKKIEECLKASII
>Mature_147_residues
MYWLIPVQEDFWETVVKTNLFGFHKESVEKYIKPGDFIIFYVGKYYAKKYGGKFVGIFKVISDWFYDETVVFPNEKLVGK
AIEVYRIKLEPIIIGECPSKDIIWNLSFIEDKFQFSKYLRNVPANLKRPIPEEDAKKIEECLKASII

Specific function: Unknown

COG id: COG1673

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0310 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002740
- InterPro:   IPR015947
- InterPro:   IPR022996 [H]

Pfam domain/function: PF01878 DUF55 [H]

EC number: NA

Molecular weight: Translated: 17362; Mature: 17362

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYWLIPVQEDFWETVVKTNLFGFHKESVEKYIKPGDFIIFYVGKYYAKKYGGKFVGIFKV
CEEEEECCHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHCCCHHHHHHH
ISDWFYDETVVFPNEKLVGKAIEVYRIKLEPIIIGECPSKDIIWNLSFIEDKFQFSKYLR
HHHHHCCCEEECCCHHHHHHHEEEEEEEECEEEEECCCCCCEEEEHHHHHHHHHHHHHHH
NVPANLKRPIPEEDAKKIEECLKASII
CCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYWLIPVQEDFWETVVKTNLFGFHKESVEKYIKPGDFIIFYVGKYYAKKYGGKFVGIFKV
CEEEEECCHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHCCCHHHHHHH
ISDWFYDETVVFPNEKLVGKAIEVYRIKLEPIIIGECPSKDIIWNLSFIEDKFQFSKYLR
HHHHHCCCEEECCCHHHHHHHEEEEEEEECEEEEECCCCCCEEEEHHHHHHHHHHHHHHH
NVPANLKRPIPEEDAKKIEECLKASII
CCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726 [H]