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The map label for this gene is hofB [C]

Identifier: 15920739

GI number: 15920739

Start: 518388

End: 520115

Strand: Direct

Name: hofB [C]

Synonym: ST0522

Alternate gene names: 15920739

Gene position: 518388-520115 (Clockwise)

Preceding gene: 15920738

Following gene: 15920745

Centisome position: 19.24

GC content: 31.25

Gene sequence:

>1728_bases
ATGGACTTAAAACTTAATATATTCGGGAAAAATAATACTAATAAAAAGAATGATAAAGAATTAATAGACTTAGATTTACC
ATACTCACTTTATCCATTATTTGTAACTTCAGCCTCATTTGAAGGAGAAGTTCAATCGGATTATGATATAGATTTAAACC
AGATTATACCAGAATATATAGCAAAAGATTTTGATGCACATAAAATTGAATTATCAATAGCAAAACCCCATGTATTTATT
ACTTATGATGAAGAAAAGGGTATCTATAAGTATAATTTAGTAGAACCTCCCCTTGATCTTAATACATTTAAAAATTATGT
TATACTAATATCTGAAATTGAGAGGAATCTTCTTTCAAATGCTGAATATGTTGAGCTAGGTAAAATCTTAGAAGAATTAA
GTATAAAGAGGAAAGATCTAAATGTTTTCCAAGGTAAAATAGGAGAGTATAAACAATTATCTACCCCATTTAAGGTTGCC
CTATACTATGTGTTAAGGAATATGTTTGGTTATAACATTATAACTCCACTTTTATTAGATAATAAAGTAGAAGATATATC
TGTTAGTGGTATAAACTTACCTGTTTACGTATATCATAGAGAATTCGAATATACTCCAACAAATATTATATTTACTAAAA
ATATGAGAATGTTTAATATAAATATTGACGGAGAGGAAATAATTGACGAATTAGTTTTAAGATTAATCTCCTTATCTAAT
AAAACTATTTCTGTTGCAAATCCCATAATGGATGGTATTTTACCTAAGGGAGATAGAATTGCGGCAACTTTTAGAAGAGA
AGTCTCTGCTAATGGTTCTTCGTTTGTAATAAGAAGATTCTCAGAAAGCCCTATAACTATATTAGATCTTATAAATTCAA
AAGTATTATCTCCACAAGCTGCTGCCTATTTATGGTATGCTATAGATATGAAATTATCTTTCATGGTTATAGGAGTTACT
GGAGCTGGAAAGACAACAGTTTTAGGTTCTATACTTAATTTAGTGAAAGAGTCAATGAAAATATTAACTATAGAAGATAT
TCCAGAATTAAGATTAGCTCAAGATAATTGGGTTCAACTATATGCTAGGCCAGCTTATGGAGGAATGGGAAAAGAAATAA
CTTTAATGGACTTGTTAAAACTCGCATTAAGATATAGACCGGATATAATAGTTGTTGGTGAGATTAGAGGAGAAGAAGCT
TATGTATTATTCCAAGCAATATCAACTGGGCACGGAGGTGCAACTACTTTTCACGCTTATGATAGTGAGAGCGCAATAAA
GAGACTAATGAATGAACCATTAAATATTCCAAGGGAATGGATTCCTATGATGAATATTATAGTTACAGTTAGAAGGTTAC
CAGTATATGTTGGAGATAAAATATTATTGAGAAGAAGAGCTGTAGCAATAGACGAGATTGTATCTTATAATGATTTAAGG
AGAACAGTTAGATGGGATCCAACAACTGATACTCATATTATAGACTATGAAGCCATGCAAGTTTTAAGAGCAAGAACTGA
GGAGGCTGGAAAGAACTGGGATGAAGTTAAGGCTGAGATAGAGAGAAGGGCCGAATATCTTAAGTTGTTAGCTTCTGCTA
GACCCATAGTTCAAAGTAAAGAAAGTTACAAGCTACTGAAGAAGTACATAATTAAGTATAGTTTAAGACCAGCAGAAGCT
ATGAGAGAAGTCCAAGCTATGGTGGGAATCAAACAACAGACTCCATAA

Upstream 100 bases:

>100_bases
TATTGCTAACACTAAGTATTAAATTCTCATTTACATCTCCAGTAGCTCCCACTCTATAAAAGCTTATATAGAAGAAAAGC
ATAATAAAAGGTGATATATA

Downstream 100 bases:

>100_bases
TACTAAAAAACAATAGTATAATTGATGGTAAAATATTTCCGAATATTATATTTAAAAATGAAAATAGAAGAGGAATAGTT
ATCCAAACCTTTATTTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MDLKLNIFGKNNTNKKNDKELIDLDLPYSLYPLFVTSASFEGEVQSDYDIDLNQIIPEYIAKDFDAHKIELSIAKPHVFI
TYDEEKGIYKYNLVEPPLDLNTFKNYVILISEIERNLLSNAEYVELGKILEELSIKRKDLNVFQGKIGEYKQLSTPFKVA
LYYVLRNMFGYNIITPLLLDNKVEDISVSGINLPVYVYHREFEYTPTNIIFTKNMRMFNINIDGEEIIDELVLRLISLSN
KTISVANPIMDGILPKGDRIAATFRREVSANGSSFVIRRFSESPITILDLINSKVLSPQAAAYLWYAIDMKLSFMVIGVT
GAGKTTVLGSILNLVKESMKILTIEDIPELRLAQDNWVQLYARPAYGGMGKEITLMDLLKLALRYRPDIIVVGEIRGEEA
YVLFQAISTGHGGATTFHAYDSESAIKRLMNEPLNIPREWIPMMNIIVTVRRLPVYVGDKILLRRRAVAIDEIVSYNDLR
RTVRWDPTTDTHIIDYEAMQVLRARTEEAGKNWDEVKAEIERRAEYLKLLASARPIVQSKESYKLLKKYIIKYSLRPAEA
MREVQAMVGIKQQTP

Sequences:

>Translated_575_residues
MDLKLNIFGKNNTNKKNDKELIDLDLPYSLYPLFVTSASFEGEVQSDYDIDLNQIIPEYIAKDFDAHKIELSIAKPHVFI
TYDEEKGIYKYNLVEPPLDLNTFKNYVILISEIERNLLSNAEYVELGKILEELSIKRKDLNVFQGKIGEYKQLSTPFKVA
LYYVLRNMFGYNIITPLLLDNKVEDISVSGINLPVYVYHREFEYTPTNIIFTKNMRMFNINIDGEEIIDELVLRLISLSN
KTISVANPIMDGILPKGDRIAATFRREVSANGSSFVIRRFSESPITILDLINSKVLSPQAAAYLWYAIDMKLSFMVIGVT
GAGKTTVLGSILNLVKESMKILTIEDIPELRLAQDNWVQLYARPAYGGMGKEITLMDLLKLALRYRPDIIVVGEIRGEEA
YVLFQAISTGHGGATTFHAYDSESAIKRLMNEPLNIPREWIPMMNIIVTVRRLPVYVGDKILLRRRAVAIDEIVSYNDLR
RTVRWDPTTDTHIIDYEAMQVLRARTEEAGKNWDEVKAEIERRAEYLKLLASARPIVQSKESYKLLKKYIIKYSLRPAEA
MREVQAMVGIKQQTP
>Mature_575_residues
MDLKLNIFGKNNTNKKNDKELIDLDLPYSLYPLFVTSASFEGEVQSDYDIDLNQIIPEYIAKDFDAHKIELSIAKPHVFI
TYDEEKGIYKYNLVEPPLDLNTFKNYVILISEIERNLLSNAEYVELGKILEELSIKRKDLNVFQGKIGEYKQLSTPFKVA
LYYVLRNMFGYNIITPLLLDNKVEDISVSGINLPVYVYHREFEYTPTNIIFTKNMRMFNINIDGEEIIDELVLRLISLSN
KTISVANPIMDGILPKGDRIAATFRREVSANGSSFVIRRFSESPITILDLINSKVLSPQAAAYLWYAIDMKLSFMVIGVT
GAGKTTVLGSILNLVKESMKILTIEDIPELRLAQDNWVQLYARPAYGGMGKEITLMDLLKLALRYRPDIIVVGEIRGEEA
YVLFQAISTGHGGATTFHAYDSESAIKRLMNEPLNIPREWIPMMNIIVTVRRLPVYVGDKILLRRRAVAIDEIVSYNDLR
RTVRWDPTTDTHIIDYEAMQVLRARTEEAGKNWDEVKAEIERRAEYLKLLASARPIVQSKESYKLLKKYIIKYSLRPAEA
MREVQAMVGIKQQTP

Specific function: Unknown

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1786296, Length=175, Percent_Identity=30.2857142857143, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 65865; Mature: 65865

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLKLNIFGKNNTNKKNDKELIDLDLPYSLYPLFVTSASFEGEVQSDYDIDLNQIIPEYI
CCEEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
AKDFDAHKIELSIAKPHVFITYDEEKGIYKYNLVEPPLDLNTFKNYVILISEIERNLLSN
HCCCCCEEEEEEEECCEEEEEEECCCCEEEEECCCCCCCHHCCCCCEEEHHHHHHHHHCC
AEYVELGKILEELSIKRKDLNVFQGKIGEYKQLSTPFKVALYYVLRNMFGYNIITPLLLD
CCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCC
NKVEDISVSGINLPVYVYHREFEYTPTNIIFTKNMRMFNINIDGEEIIDELVLRLISLSN
CCCCEEEECCCCEEEEEEEEEEEECCCEEEEECCEEEEEEECCHHHHHHHHHHHHHHCCC
KTISVANPIMDGILPKGDRIAATFRREVSANGSSFVIRRFSESPITILDLINSKVLSPQA
CEEEHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCH
AAYLWYAIDMKLSFMVIGVTGAGKTTVLGSILNLVKESMKILTIEDIPELRLAQDNWVQL
HEEEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHEEEEECCCCCCEECCCCEEEE
YARPAYGGMGKEITLMDLLKLALRYRPDIIVVGEIRGEEAYVLFQAISTGHGGATTFHAY
EEECCCCCCCCEEHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEC
DSESAIKRLMNEPLNIPREWIPMMNIIVTVRRLPVYVGDKILLRRRAVAIDEIVSYNDLR
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHH
RTVRWDPTTDTHIIDYEAMQVLRARTEEAGKNWDEVKAEIERRAEYLKLLASARPIVQSK
HHEECCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCH
ESYKLLKKYIIKYSLRPAEAMREVQAMVGIKQQTP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDLKLNIFGKNNTNKKNDKELIDLDLPYSLYPLFVTSASFEGEVQSDYDIDLNQIIPEYI
CCEEEEEEECCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH
AKDFDAHKIELSIAKPHVFITYDEEKGIYKYNLVEPPLDLNTFKNYVILISEIERNLLSN
HCCCCCEEEEEEEECCEEEEEEECCCCEEEEECCCCCCCHHCCCCCEEEHHHHHHHHHCC
AEYVELGKILEELSIKRKDLNVFQGKIGEYKQLSTPFKVALYYVLRNMFGYNIITPLLLD
CCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCC
NKVEDISVSGINLPVYVYHREFEYTPTNIIFTKNMRMFNINIDGEEIIDELVLRLISLSN
CCCCEEEECCCCEEEEEEEEEEEECCCEEEEECCEEEEEEECCHHHHHHHHHHHHHHCCC
KTISVANPIMDGILPKGDRIAATFRREVSANGSSFVIRRFSESPITILDLINSKVLSPQA
CEEEHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCH
AAYLWYAIDMKLSFMVIGVTGAGKTTVLGSILNLVKESMKILTIEDIPELRLAQDNWVQL
HEEEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHEEEEECCCCCCEECCCCEEEE
YARPAYGGMGKEITLMDLLKLALRYRPDIIVVGEIRGEEAYVLFQAISTGHGGATTFHAY
EEECCCCCCCCEEHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEC
DSESAIKRLMNEPLNIPREWIPMMNIIVTVRRLPVYVGDKILLRRRAVAIDEIVSYNDLR
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHH
RTVRWDPTTDTHIIDYEAMQVLRARTEEAGKNWDEVKAEIERRAEYLKLLASARPIVQSK
HHEECCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCH
ESYKLLKKYIIKYSLRPAEAMREVQAMVGIKQQTP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]