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The map label for this gene is rio1 [H]

Identifier: 15920729

GI number: 15920729

Start: 509615

End: 510013

Strand: Reverse

Name: rio1 [H]

Synonym: ST0513

Alternate gene names: 15920729

Gene position: 510013-509615 (Counterclockwise)

Preceding gene: 15920730

Following gene: 15920728

Centisome position: 18.93

GC content: 31.58

Gene sequence:

>399_bases
GTGAGAGTACCAGAGCCGATTTATGTTCTTGAGAATATTTTAGTGATGCAATTTATTGGAGAAGACGGAATCAGGGCACC
TCTTCTAAAAGAACTTCCAGATGACGAAATAAATGAGGAGTTGTACAAAGATATTATAGATCAGCTAGATAAAATGGTAA
ATAAAGCTGAATTAGTGCACGGAGATTTAAGTGAATATAACATCATGGTTAAGGATGGAAAAAACTATATTATAGATGTA
AGTCAAGCAGTAGATATAGATCATCCAAATGCACTAGAACTATTAAAGAGAGATATAGAGAATTTAAATACATTCTTTGA
AAGTAAGGGAATTGAGATTATTGAGACTGAGGAAATATTAAGGAGATTTAAGATATATGAAAATGAGGACCAAAATTGA

Upstream 100 bases:

>100_bases
TCCTAGATTTGAAGGTATAAAGGTATCTAATACAAGACAATTAATAAGTGTATGGGCAAGAAAAGAGTTTAAGAATTTAA
GTCGTCTTTTCAGAAATGAT

Downstream 100 bases:

>100_bases
TGTATATTACTGTACCAGATGACAAAATTAATTTAGTAAAATCAATACTAGGAAGACTAGAAGAAATCAGCAATACTAAG
ATAGAATTTGATGAAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MRVPEPIYVLENILVMQFIGEDGIRAPLLKELPDDEINEELYKDIIDQLDKMVNKAELVHGDLSEYNIMVKDGKNYIIDV
SQAVDIDHPNALELLKRDIENLNTFFESKGIEIIETEEILRRFKIYENEDQN

Sequences:

>Translated_132_residues
MRVPEPIYVLENILVMQFIGEDGIRAPLLKELPDDEINEELYKDIIDQLDKMVNKAELVHGDLSEYNIMVKDGKNYIIDV
SQAVDIDHPNALELLKRDIENLNTFFESKGIEIIETEEILRRFKIYENEDQN
>Mature_132_residues
MRVPEPIYVLENILVMQFIGEDGIRAPLLKELPDDEINEELYKDIIDQLDKMVNKAELVHGDLSEYNIMVKDGKNYIIDV
SQAVDIDHPNALELLKRDIENLNTFFESKGIEIIETEEILRRFKIYENEDQN

Specific function: Unknown

COG id: COG1718

COG function: function code TD; Serine/threonine protein kinase involved in cell cycle control

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family [H]

Homologues:

Organism=Homo sapiens, GI23510358, Length=119, Percent_Identity=44.5378151260504, Blast_Score=107, Evalue=2e-24,
Organism=Homo sapiens, GI23510356, Length=119, Percent_Identity=44.5378151260504, Blast_Score=107, Evalue=2e-24,
Organism=Homo sapiens, GI22325377, Length=113, Percent_Identity=42.4778761061947, Blast_Score=94, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI115532073, Length=119, Percent_Identity=42.0168067226891, Blast_Score=104, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17556977, Length=119, Percent_Identity=39.4957983193277, Blast_Score=95, Evalue=8e-21,
Organism=Saccharomyces cerevisiae, GI6324693, Length=129, Percent_Identity=40.3100775193798, Blast_Score=92, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24662811, Length=119, Percent_Identity=40.3361344537815, Blast_Score=107, Evalue=3e-24,
Organism=Drosophila melanogaster, GI21356879, Length=119, Percent_Identity=40.3361344537815, Blast_Score=107, Evalue=3e-24,
Organism=Drosophila melanogaster, GI19920700, Length=125, Percent_Identity=43.2, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR018934
- InterPro:   IPR018935
- InterPro:   IPR008266 [H]

Pfam domain/function: PF01163 RIO1 [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 15450; Mature: 15450

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS00109 PROTEIN_KINASE_TYR ; PS01245 RIO1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVPEPIYVLENILVMQFIGEDGIRAPLLKELPDDEINEELYKDIIDQLDKMVNKAELVH
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GDLSEYNIMVKDGKNYIIDVSQAVDIDHPNALELLKRDIENLNTFFESKGIEIIETEEIL
CCHHHCEEEEECCCCEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECHHHHH
RRFKIYENEDQN
HHHHHCCCCCCC
>Mature Secondary Structure
MRVPEPIYVLENILVMQFIGEDGIRAPLLKELPDDEINEELYKDIIDQLDKMVNKAELVH
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GDLSEYNIMVKDGKNYIIDVSQAVDIDHPNALELLKRDIENLNTFFESKGIEIIETEEIL
CCHHHCEEEEECCCCEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECHHHHH
RRFKIYENEDQN
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1408839; 11029001 [H]