Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

Click here to switch to the map view.

The map label for this gene is yieM [C]

Identifier: 15920717

GI number: 15920717

Start: 499396

End: 500757

Strand: Reverse

Name: yieM [C]

Synonym: ST0501

Alternate gene names: 15920717

Gene position: 500757-499396 (Counterclockwise)

Preceding gene: 15920718

Following gene: 15920710

Centisome position: 18.58

GC content: 31.64

Gene sequence:

>1362_bases
ATGAGTGAAGAAGAAGGTTTTTTAAGAGGTATTGATTATGAAGATCCTTTAGTTCGTTATCGTGGTGAAAGAATAAGTTA
TACATTGAAAAAACTTAGTGGTAGAGATTTACAATTAGATGAGAATTTTTTGATAGATACATATTACATCCATTACTTAC
CTATGCCTATACCTAAAACAAAGGAGGATGTTCCTAAAGGAAAAGAAATAATGTATAGATTTATAGATATGATGCTAAAT
TCACCTTTAGTTGAAGAGAATAGGAATTACTCTATGGTTAACTCAGCTGTTAGTATGGCATTATCTGTTAGTTATGTTCA
AAATCTAATAGAAGAATTAGAAAGAATAAAGAGAACTTCACAGTCCCAAGAAGAAAGACAAATGGCTGAGCAAATACTTA
ACGGTCTAATGAAAGGAAGTGGAGGAAAGCAAGGACAAAAACAACAGCAACAACAAGATAGTCAGCAAATGGAGAAACTA
ATGAAACAAGTTAATGACAAAGCACTAAGCAAAGCAATAGAAGATGCAGAATCAGTTAGAAATTTACAGAAAATAATAGG
CGGCAATGGTGCAGGTACGGGTTCGATACTTAATTTTGAAGGAGAAATTCATGAAGTTCTTAGATTAGCTAGAAATACAG
AAATAAAGAAAATTCTAGAATTTTTAAGCGGAATGCCCAGATTAGGAAGCTTTACAAAGAAAAGAACTACTAGATTTTCT
AGAGGAGAACTTTATGGATACGAGGAAGGCTCGGATCTTGAGAGAATCGTATCTTCTGAATTAGCTTTGCCAGAAGAACT
ATTCTACATAAAACTTGCGGAATCCCAATTATTATTGTATCAAAAGAGAATAAAAGAAGTATTAGGACCTATTTATTTAT
TACTAGATAAATCAGGAAGTATGGATGGTGAAAAAATAATATGGGCTAAAGCTGTAGCCTTGGCATTATATAGTAGAGCT
AGAAGAGAAAATAGAGATTTCTATATAAGATTCTTTGATAATATACCTTATCCTTTAATTAAAGTTCCTAAAAATGCAAA
AAGTAAAGATGTTGTTAAAATGATAGAATATATTGGCAAAATAAGAGGAGGAGGAGGTACTGATATCAGTAGATCTGTAA
TTTCAGCATGTGAAGATATTAAAGAAGGTCATGTAAAAGGAGTAAGTGAGATAATATTATTAACGGATGGTGAGGATAAA
ATTGCTGAAACTACAGTAAGAAGGTCTTTGAAAGAGGCTAATTCTACATTAATTAGCGTAATGATAAGAGGAGATAATGC
TGATTTGAGAAGAGTCTCAGATCAATATTTAGTAGTATATAAATTAGATCATGAAGACCTTTTGAAGGTAGTAGAAGCAT
AA

Upstream 100 bases:

>100_bases
AGGAGAGTGGAGACGAAAAAGTGGAAGATTTTTCAAAGGAAGTTGTTAAAGAAATTGATGTACTATTAGAAAAAGTAGCT
AGAAAGCTGGGGATTTATAC

Downstream 100 bases:

>100_bases
AGGAGGAGGACCCAGCATCATTCCATCCATACTTGGGCGTCAGCTGGGCATGGCCACTTAACCATATACTTCCATAAAAT
AAAAAATTATTTTTTAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MSEEEGFLRGIDYEDPLVRYRGERISYTLKKLSGRDLQLDENFLIDTYYIHYLPMPIPKTKEDVPKGKEIMYRFIDMMLN
SPLVEENRNYSMVNSAVSMALSVSYVQNLIEELERIKRTSQSQEERQMAEQILNGLMKGSGGKQGQKQQQQQDSQQMEKL
MKQVNDKALSKAIEDAESVRNLQKIIGGNGAGTGSILNFEGEIHEVLRLARNTEIKKILEFLSGMPRLGSFTKKRTTRFS
RGELYGYEEGSDLERIVSSELALPEELFYIKLAESQLLLYQKRIKEVLGPIYLLLDKSGSMDGEKIIWAKAVALALYSRA
RRENRDFYIRFFDNIPYPLIKVPKNAKSKDVVKMIEYIGKIRGGGGTDISRSVISACEDIKEGHVKGVSEIILLTDGEDK
IAETTVRRSLKEANSTLISVMIRGDNADLRRVSDQYLVVYKLDHEDLLKVVEA

Sequences:

>Translated_453_residues
MSEEEGFLRGIDYEDPLVRYRGERISYTLKKLSGRDLQLDENFLIDTYYIHYLPMPIPKTKEDVPKGKEIMYRFIDMMLN
SPLVEENRNYSMVNSAVSMALSVSYVQNLIEELERIKRTSQSQEERQMAEQILNGLMKGSGGKQGQKQQQQQDSQQMEKL
MKQVNDKALSKAIEDAESVRNLQKIIGGNGAGTGSILNFEGEIHEVLRLARNTEIKKILEFLSGMPRLGSFTKKRTTRFS
RGELYGYEEGSDLERIVSSELALPEELFYIKLAESQLLLYQKRIKEVLGPIYLLLDKSGSMDGEKIIWAKAVALALYSRA
RRENRDFYIRFFDNIPYPLIKVPKNAKSKDVVKMIEYIGKIRGGGGTDISRSVISACEDIKEGHVKGVSEIILLTDGEDK
IAETTVRRSLKEANSTLISVMIRGDNADLRRVSDQYLVVYKLDHEDLLKVVEA
>Mature_452_residues
SEEEGFLRGIDYEDPLVRYRGERISYTLKKLSGRDLQLDENFLIDTYYIHYLPMPIPKTKEDVPKGKEIMYRFIDMMLNS
PLVEENRNYSMVNSAVSMALSVSYVQNLIEELERIKRTSQSQEERQMAEQILNGLMKGSGGKQGQKQQQQQDSQQMEKLM
KQVNDKALSKAIEDAESVRNLQKIIGGNGAGTGSILNFEGEIHEVLRLARNTEIKKILEFLSGMPRLGSFTKKRTTRFSR
GELYGYEEGSDLERIVSSELALPEELFYIKLAESQLLLYQKRIKEVLGPIYLLLDKSGSMDGEKIIWAKAVALALYSRAR
RENRDFYIRFFDNIPYPLIKVPKNAKSKDVVKMIEYIGKIRGGGGTDISRSVISACEDIKEGHVKGVSEIILLTDGEDKI
AETTVRRSLKEANSTLISVMIRGDNADLRRVSDQYLVVYKLDHEDLLKVVEA

Specific function: Unknown

COG id: COG2425

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51665; Mature: 51534

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEEGFLRGIDYEDPLVRYRGERISYTLKKLSGRDLQLDENFLIDTYYIHYLPMPIPKT
CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCC
KEDVPKGKEIMYRFIDMMLNSPLVEENRNYSMVNSAVSMALSVSYVQNLIEELERIKRTS
HHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QSQEERQMAEQILNGLMKGSGGKQGQKQQQQQDSQQMEKLMKQVNDKALSKAIEDAESVR
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLQKIIGGNGAGTGSILNFEGEIHEVLRLARNTEIKKILEFLSGMPRLGSFTKKRTTRFS
HHHHHHCCCCCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHCCCC
RGELYGYEEGSDLERIVSSELALPEELFYIKLAESQLLLYQKRIKEVLGPIYLLLDKSGS
CCCCCCCCCCCHHHHHHHHHHCCCHHHEEEEEHHHHHHHHHHHHHHHHCHHEEEEECCCC
MDGEKIIWAKAVALALYSRARRENRDFYIRFFDNIPYPLIKVPKNAKSKDVVKMIEYIGK
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHH
IRGGGGTDISRSVISACEDIKEGHVKGVSEIILLTDGEDKIAETTVRRSLKEANSTLISV
HCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEE
MIRGDNADLRRVSDQYLVVYKLDHEDLLKVVEA
EEECCCCHHHHCCCCEEEEEECCHHHHHHHHCC
>Mature Secondary Structure 
SEEEGFLRGIDYEDPLVRYRGERISYTLKKLSGRDLQLDENFLIDTYYIHYLPMPIPKT
CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCC
KEDVPKGKEIMYRFIDMMLNSPLVEENRNYSMVNSAVSMALSVSYVQNLIEELERIKRTS
HHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QSQEERQMAEQILNGLMKGSGGKQGQKQQQQQDSQQMEKLMKQVNDKALSKAIEDAESVR
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLQKIIGGNGAGTGSILNFEGEIHEVLRLARNTEIKKILEFLSGMPRLGSFTKKRTTRFS
HHHHHHCCCCCCCCCEEECCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHCCCC
RGELYGYEEGSDLERIVSSELALPEELFYIKLAESQLLLYQKRIKEVLGPIYLLLDKSGS
CCCCCCCCCCCHHHHHHHHHHCCCHHHEEEEEHHHHHHHHHHHHHHHHCHHEEEEECCCC
MDGEKIIWAKAVALALYSRARRENRDFYIRFFDNIPYPLIKVPKNAKSKDVVKMIEYIGK
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCHHHHHHHHHHHHH
IRGGGGTDISRSVISACEDIKEGHVKGVSEIILLTDGEDKIAETTVRRSLKEANSTLISV
HCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEE
MIRGDNADLRRVSDQYLVVYKLDHEDLLKVVEA
EEECCCCHHHHCCCCEEEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]