| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920710
Identifier: 15920710
GI number: 15920710
Start: 492697
End: 494298
Strand: Reverse
Name: 15920710
Synonym: ST0495
Alternate gene names: NA
Gene position: 494298-492697 (Counterclockwise)
Preceding gene: 15920717
Following gene: 15920706
Centisome position: 18.34
GC content: 29.84
Gene sequence:
>1602_bases GTGGATTCTGAAGCTATTACGAGAAAGTACTACTCTAAATTAAAAAGCTTACCAGACATGAAGATTCTCTCAGGACTTGC AACGTTTGAATCAGCTATAGTAATAATAAGAAGCATAGAAATAGGATTGTTATATTTAGTATCATTTATAATATACTTTG CATTATTATCAATATTATTCATAACTGAAAAAAAGTTAATTTTCTTTTTCATAGATTTGACTGCATTCTTCTATATTATA TTTTCTTATATAATTATAGGGTATTATTATTACGCATTAACTCTTTTCTCGCCACTCATAGGTTATACATTATTACCAAG AACAAGCGAATTAAAATCATCACTTATTATACTAGCAATAAATTTTGCATCAATAGCATTTCACATAACTTATCTTAACG TTATATATATAGTAATGATCTCCTTGGTTTTTTACTATTACATTCACTTAATTAATAAGAAAGGCGAAAAAATAACTGGG ATTAAATCACTACAAATTCTAAGACCTTTTTTGGCCAACATAATAAAAAAAGATTCTAAGCAATTAGAAAAGTTCTTGCA GGATATATCAATTAAATCAACCATTCATATAGGTATCTTCAAAGTGAATAATATCTATTTTGTTTTACCAAAAATTCATT ATGGCATCTCTGGAGATATAGGAAGTAGCAAATTTATCTATCAACTAGAGTCAGAGAATCCAAATAACTTAATTTTCCAT GGCCCAGGAAGTCATGAGATAGATTTAGCAACATCAACACAATCTAAAGCCATAGCTAAATTAATTTCAGATGAGGAGAA AAAAGCTGATAATTGGGTTTCTCTTAAATTCTACGGTATAAAAGAATGGACCTGTGGTGAATTTTCTGGCGTCACTCTAG ATTTTGGTGATAAAAGCTTATCATTCGTACAAAGACCTAACTACGGTATTGATGACCTACCCTTAAAACTGTGGAATTTT ATAGTAAATTCTGGAAATTATATAGTTGATTGCCATAACGAATACCTAGAGAGAGAATTACCTTCTAATACTGATTCATG TATAACTAATGGTATACTAAAAAGTATAAAAGAAAAAGGAGAAGAAAAGCCTTTTATTGTAGGGTATGCTGAAGATAAGG TCAAAGACTGTGAAGGTTTATGCGATAACAGAATTAGAGTTACTTACATATCTGATGGAGAGAAAGATCTTAGCATAATT TATATTTACTCAAACAATGCTGATCCGAATCTGACCGTAAAAATCAGAGAAAAACTGAAAGGTGTAGTTAACTATCCCAT ACTTGTAACGCCAGATGATCATAGTTGTACTGGTACAGTTTTTGGAGATCTTTACATCCCAGCCCAACCATGTGAGCAAT TAGTGGAAAAAGCGCTTGAATTAACATTAAAAGCCAAAAGCCAAGCATTAAAAACCACTATATCTTTTAAAGGAATAGAA ATAAAAGGGGTTAAAATACTAGGATCAATTATATCATTAATGGTAAATGCACTAGAAGAAGTAGGAGGGTATACAATGAA AACATTTTGGATTCCTTTAGTTACACCTTTTATCCTTACTATAATTTTTATTTTACTTACTAATGTTCATATTAAATTCT GA
Upstream 100 bases:
>100_bases TAAATATCGCATTCCTCTTTTTTATAATGGACTACTTTTTTGGCATTCAACATTTCATTTGTCAATAGCATTTAAACCCC CCAATTTACTCTATTTAACC
Downstream 100 bases:
>100_bases GATTAAACTATCAACTTGAGTTTTCCATATTTGTAAGCCAGATGGGGATCTAGGATAATTATAATATAATTGCTTAATAT TTTTCATGTATTCTGCTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MDSEAITRKYYSKLKSLPDMKILSGLATFESAIVIIRSIEIGLLYLVSFIIYFALLSILFITEKKLIFFFIDLTAFFYII FSYIIIGYYYYALTLFSPLIGYTLLPRTSELKSSLIILAINFASIAFHITYLNVIYIVMISLVFYYYIHLINKKGEKITG IKSLQILRPFLANIIKKDSKQLEKFLQDISIKSTIHIGIFKVNNIYFVLPKIHYGISGDIGSSKFIYQLESENPNNLIFH GPGSHEIDLATSTQSKAIAKLISDEEKKADNWVSLKFYGIKEWTCGEFSGVTLDFGDKSLSFVQRPNYGIDDLPLKLWNF IVNSGNYIVDCHNEYLERELPSNTDSCITNGILKSIKEKGEEKPFIVGYAEDKVKDCEGLCDNRIRVTYISDGEKDLSII YIYSNNADPNLTVKIREKLKGVVNYPILVTPDDHSCTGTVFGDLYIPAQPCEQLVEKALELTLKAKSQALKTTISFKGIE IKGVKILGSIISLMVNALEEVGGYTMKTFWIPLVTPFILTIIFILLTNVHIKF
Sequences:
>Translated_533_residues MDSEAITRKYYSKLKSLPDMKILSGLATFESAIVIIRSIEIGLLYLVSFIIYFALLSILFITEKKLIFFFIDLTAFFYII FSYIIIGYYYYALTLFSPLIGYTLLPRTSELKSSLIILAINFASIAFHITYLNVIYIVMISLVFYYYIHLINKKGEKITG IKSLQILRPFLANIIKKDSKQLEKFLQDISIKSTIHIGIFKVNNIYFVLPKIHYGISGDIGSSKFIYQLESENPNNLIFH GPGSHEIDLATSTQSKAIAKLISDEEKKADNWVSLKFYGIKEWTCGEFSGVTLDFGDKSLSFVQRPNYGIDDLPLKLWNF IVNSGNYIVDCHNEYLERELPSNTDSCITNGILKSIKEKGEEKPFIVGYAEDKVKDCEGLCDNRIRVTYISDGEKDLSII YIYSNNADPNLTVKIREKLKGVVNYPILVTPDDHSCTGTVFGDLYIPAQPCEQLVEKALELTLKAKSQALKTTISFKGIE IKGVKILGSIISLMVNALEEVGGYTMKTFWIPLVTPFILTIIFILLTNVHIKF >Mature_533_residues MDSEAITRKYYSKLKSLPDMKILSGLATFESAIVIIRSIEIGLLYLVSFIIYFALLSILFITEKKLIFFFIDLTAFFYII FSYIIIGYYYYALTLFSPLIGYTLLPRTSELKSSLIILAINFASIAFHITYLNVIYIVMISLVFYYYIHLINKKGEKITG IKSLQILRPFLANIIKKDSKQLEKFLQDISIKSTIHIGIFKVNNIYFVLPKIHYGISGDIGSSKFIYQLESENPNNLIFH GPGSHEIDLATSTQSKAIAKLISDEEKKADNWVSLKFYGIKEWTCGEFSGVTLDFGDKSLSFVQRPNYGIDDLPLKLWNF IVNSGNYIVDCHNEYLERELPSNTDSCITNGILKSIKEKGEEKPFIVGYAEDKVKDCEGLCDNRIRVTYISDGEKDLSII YIYSNNADPNLTVKIREKLKGVVNYPILVTPDDHSCTGTVFGDLYIPAQPCEQLVEKALELTLKAKSQALKTTISFKGIE IKGVKILGSIISLMVNALEEVGGYTMKTFWIPLVTPFILTIIFILLTNVHIKF
Specific function: Unknown
COG id: COG3356
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60463; Mature: 60463
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSEAITRKYYSKLKSLPDMKILSGLATFESAIVIIRSIEIGLLYLVSFIIYFALLSILF CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITEKKLIFFFIDLTAFFYIIFSYIIIGYYYYALTLFSPLIGYTLLPRTSELKSSLIILAI HHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCEEEEEE NFASIAFHITYLNVIYIVMISLVFYYYIHLINKKGEKITGIKSLQILRPFLANIIKKDSK EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHH QLEKFLQDISIKSTIHIGIFKVNNIYFVLPKIHYGISGDIGSSKFIYQLESENPNNLIFH HHHHHHHHCCCCCEEEEEEEEECCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEE GPGSHEIDLATSTQSKAIAKLISDEEKKADNWVSLKFYGIKEWTCGEFSGVTLDFGDKSL CCCCCEEEEECCCHHHHHHHHHCCCHHCCCCEEEEEEEEECCCCCCCCCCEEEECCCCCH SFVQRPNYGIDDLPLKLWNFIVNSGNYIVDCHNEYLERELPSNTDSCITNGILKSIKEKG HHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHCC EEKPFIVGYAEDKVKDCEGLCDNRIRVTYISDGEKDLSIIYIYSNNADPNLTVKIREKLK CCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEHHHHH GVVNYPILVTPDDHSCTGTVFGDLYIPAQPCEQLVEKALELTLKAKSQALKTTISFKGIE HHHCCCEEEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEE IKGVKILGSIISLMVNALEEVGGYTMKTFWIPLVTPFILTIIFILLTNVHIKF EEHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCEECC >Mature Secondary Structure MDSEAITRKYYSKLKSLPDMKILSGLATFESAIVIIRSIEIGLLYLVSFIIYFALLSILF CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITEKKLIFFFIDLTAFFYIIFSYIIIGYYYYALTLFSPLIGYTLLPRTSELKSSLIILAI HHCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHCCCEEEEEE NFASIAFHITYLNVIYIVMISLVFYYYIHLINKKGEKITGIKSLQILRPFLANIIKKDSK EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHH QLEKFLQDISIKSTIHIGIFKVNNIYFVLPKIHYGISGDIGSSKFIYQLESENPNNLIFH HHHHHHHHCCCCCEEEEEEEEECCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEE GPGSHEIDLATSTQSKAIAKLISDEEKKADNWVSLKFYGIKEWTCGEFSGVTLDFGDKSL CCCCCEEEEECCCHHHHHHHHHCCCHHCCCCEEEEEEEEECCCCCCCCCCEEEECCCCCH SFVQRPNYGIDDLPLKLWNFIVNSGNYIVDCHNEYLERELPSNTDSCITNGILKSIKEKG HHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHCC EEKPFIVGYAEDKVKDCEGLCDNRIRVTYISDGEKDLSIIYIYSNNADPNLTVKIREKLK CCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEECCCCCCEEEEEHHHHH GVVNYPILVTPDDHSCTGTVFGDLYIPAQPCEQLVEKALELTLKAKSQALKTTISFKGIE HHHCCCEEEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEE IKGVKILGSIISLMVNALEEVGGYTMKTFWIPLVTPFILTIIFILLTNVHIKF EEHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA