| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920705
Identifier: 15920705
GI number: 15920705
Start: 488441
End: 489436
Strand: Reverse
Name: 15920705
Synonym: ST0490
Alternate gene names: NA
Gene position: 489436-488441 (Counterclockwise)
Preceding gene: 15920706
Following gene: 15920704
Centisome position: 18.16
GC content: 31.93
Gene sequence:
>996_bases ATGGATATTGGTGTAATAGGGGCAGGTCCTGCGGGATTAGCATTAGCATGGTTCTTAAAGGGTACCAAATATAACGTTAC AGTCTATGAAGGACTTAATGATGTAGGTCTGAAACCATGTGCATGGGGATTAATTTCTGGTATTGAAGATTATGTACCAA TAACTAAAGAGGCTATTATAAGTGAAATAAAAGGATTTAGGATATACCTTGATGATAAACTAGTACATGATATTCGAGTA AATAAAAAGTTAGGATATATAATAAATAAGCCAATTTTTCTTAAGAATATTGCTGAAAAGGTAGAGGTAAAATATAACAT AAAAATAATAGAAAAAGACGGCGAGTATTTTACTACAGAAGGAACAAAAATAATTGCAGACAAAATGATTTATGCTAACG GTCATTACTCATTACCTAAAGATAACACAATTCCCGCCATTCAATATATAACTGATTACCAAATAGATAAAGAAATAGTA GAATTCTATTTCTATAGTGATTTATTAGGTTACGCATGGATATTTCCAGACGAAAATGGAAGTAAAATTGGAATTGGAGG ATGGGCTGATATACCCTTTCTTAAAGAGAGAATAAAGAGAATTTTAAAGGGAAAAATACTCAATTTTCATGGAGCAAGAG TATCAGATTTTGGTATTCTAGAAGAGAGATTAAACGGGAGATTTATAGGTGAAGCCTTAGGCACTGTATATCCTCTAACT GGAGAAGGAATTAGACCCTCAATAATATCAGCAAAACTCTTAGCAGATTCATTGCTCAATGAGAAAAATTTCGAGAGGGA GTTTAAAAAAAGCAAATTATATTGGACCATCCAAACTCAGGCTAAAATTGTTCATGGCGTTAAAAAAGGATATATGAGTT TAAAGGGACTATCTAGAATTATGACAAAAAGTGATCCTAATCTAGTCTTAAAAGTTGCTATCGGTGACTTCGATTCATTT GATATTATTAAGTTATTTGGGAGGATGATTATATGA
Upstream 100 bases:
>100_bases AGGAAGATACTTAGCAAACTTTTATCAATTAATTATATTATATTCTGGAACGATTATAGTAGGAATACTAATATTACTCT ATCTTAGGAAGTGAAATTAA
Downstream 100 bases:
>100_bases CATATTTCCTTGATGATATAGATAAAAAAATCTTAAAAATTCTTCAAGAAGATGCTAGGACGCCTTTTTCTAAGATCGCT AAAATGCTTAATCTAAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Geranylgeranyl Reductase; FAD Dependent Oxidoreductase; Dehydrogenase FixC; Dehydrogenase; Geranylgeranyl Hydrogenase; Bacteriochlorophyll Synthase
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MDIGVIGAGPAGLALAWFLKGTKYNVTVYEGLNDVGLKPCAWGLISGIEDYVPITKEAIISEIKGFRIYLDDKLVHDIRV NKKLGYIINKPIFLKNIAEKVEVKYNIKIIEKDGEYFTTEGTKIIADKMIYANGHYSLPKDNTIPAIQYITDYQIDKEIV EFYFYSDLLGYAWIFPDENGSKIGIGGWADIPFLKERIKRILKGKILNFHGARVSDFGILEERLNGRFIGEALGTVYPLT GEGIRPSIISAKLLADSLLNEKNFEREFKKSKLYWTIQTQAKIVHGVKKGYMSLKGLSRIMTKSDPNLVLKVAIGDFDSF DIIKLFGRMII
Sequences:
>Translated_331_residues MDIGVIGAGPAGLALAWFLKGTKYNVTVYEGLNDVGLKPCAWGLISGIEDYVPITKEAIISEIKGFRIYLDDKLVHDIRV NKKLGYIINKPIFLKNIAEKVEVKYNIKIIEKDGEYFTTEGTKIIADKMIYANGHYSLPKDNTIPAIQYITDYQIDKEIV EFYFYSDLLGYAWIFPDENGSKIGIGGWADIPFLKERIKRILKGKILNFHGARVSDFGILEERLNGRFIGEALGTVYPLT GEGIRPSIISAKLLADSLLNEKNFEREFKKSKLYWTIQTQAKIVHGVKKGYMSLKGLSRIMTKSDPNLVLKVAIGDFDSF DIIKLFGRMII >Mature_331_residues MDIGVIGAGPAGLALAWFLKGTKYNVTVYEGLNDVGLKPCAWGLISGIEDYVPITKEAIISEIKGFRIYLDDKLVHDIRV NKKLGYIINKPIFLKNIAEKVEVKYNIKIIEKDGEYFTTEGTKIIADKMIYANGHYSLPKDNTIPAIQYITDYQIDKEIV EFYFYSDLLGYAWIFPDENGSKIGIGGWADIPFLKERIKRILKGKILNFHGARVSDFGILEERLNGRFIGEALGTVYPLT GEGIRPSIISAKLLADSLLNEKNFEREFKKSKLYWTIQTQAKIVHGVKKGYMSLKGLSRIMTKSDPNLVLKVAIGDFDSF DIIKLFGRMII
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37364; Mature: 37364
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIGVIGAGPAGLALAWFLKGTKYNVTVYEGLNDVGLKPCAWGLISGIEDYVPITKEAII CCEEEECCCHHHHHHHHEECCCEEEEEEECCCCCCCCCHHHHHHHHCHHHHCCCHHHHHH SEIKGFRIYLDDKLVHDIRVNKKLGYIINKPIFLKNIAEKVEVKYNIKIIEKDGEYFTTE HHHCCEEEEECCCEEEHEEECCEECCEECCCHHHHHHHHHEEEEEEEEEEEECCCEEECC GTKIIADKMIYANGHYSLPKDNTIPAIQYITDYQIDKEIVEFYFYSDLLGYAWIFPDENG CCEEEEEEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEECCCC SKIGIGGWADIPFLKERIKRILKGKILNFHGARVSDFGILEERLNGRFIGEALGTVYPLT CEEECCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCEEHHHHHCCEECCC GEGIRPSIISAKLLADSLLNEKNFEREFKKSKLYWTIQTQAKIVHGVKKGYMSLKGLSRI CCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH MTKSDPNLVLKVAIGDFDSFDIIKLFGRMII HHCCCCCEEEEEEECCCCCHHHHHHHHHHCC >Mature Secondary Structure MDIGVIGAGPAGLALAWFLKGTKYNVTVYEGLNDVGLKPCAWGLISGIEDYVPITKEAII CCEEEECCCHHHHHHHHEECCCEEEEEEECCCCCCCCCHHHHHHHHCHHHHCCCHHHHHH SEIKGFRIYLDDKLVHDIRVNKKLGYIINKPIFLKNIAEKVEVKYNIKIIEKDGEYFTTE HHHCCEEEEECCCEEEHEEECCEECCEECCCHHHHHHHHHEEEEEEEEEEEECCCEEECC GTKIIADKMIYANGHYSLPKDNTIPAIQYITDYQIDKEIVEFYFYSDLLGYAWIFPDENG CCEEEEEEEEEECCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEECCCC SKIGIGGWADIPFLKERIKRILKGKILNFHGARVSDFGILEERLNGRFIGEALGTVYPLT CEEECCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCEEHHHHHCCEECCC GEGIRPSIISAKLLADSLLNEKNFEREFKKSKLYWTIQTQAKIVHGVKKGYMSLKGLSRI CCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHH MTKSDPNLVLKVAIGDFDSFDIIKLFGRMII HHCCCCCEEEEEEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA