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The map label for this gene is rnp2 [H]

Identifier: 15920659

GI number: 15920659

Start: 453098

End: 453586

Strand: Reverse

Name: rnp2 [H]

Synonym: ST0447

Alternate gene names: 15920659

Gene position: 453586-453098 (Counterclockwise)

Preceding gene: 15920660

Following gene: 15920658

Centisome position: 16.83

GC content: 28.63

Gene sequence:

>489_bases
ATGGAGCAGACGAAGAAGAGGCGATTGATTGGATTTATTTTTCACCACAAAGACTTATTTCAAAGTATGAACATTCTTAA
CTTACTACTTTTCATCTGGCTTTTAGTTCTTACTGTTATGGTTATTTTCTCATATAGAACTAGAATAATCTATATTAAAA
AAATTAAAAACAAGAGGGATACAAGAGCTAAAAGATATGTTATTTTTGATATAATCAGTGAAGATAACTTCGAAATAAGG
GAAATTGAAGAAGCAGTGAGAAACTCAGTAAAGGAATTAGGAGGAAAAATTTGGCTAGATCTTTCAAATCCTAAAGTTAT
TATGATATATAATAATCGTGGTATTATATCTACTAATAGAATAGGCTATAAGATTATTATAGCAAGCTTACCTTTAATAA
AAAAGATTAAGAATAAGGAAGTTCTTCTTGTACCTAGAAGAACTACAGGAAGTTTAAAAAGGGCTAAACGATTAATAGGA
ATTGAGTGA

Upstream 100 bases:

>100_bases
TGGTCCTACAAGTGGATATCTGTCCCTTTAATATCTTCTTGTGCAAGTTCTTTAGGAGAGATCTGGCCTCCTTTGTCTAA
AATAAACTTACTAGTTATTC

Downstream 100 bases:

>100_bases
TGATGCCGTCCCAGACTGTATCATGATGAACACGCGACGAACTGATAACACTTTTTAACACTTATTATATCTACTGATAT
TGGGAGAAGAAATTTGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: RNase P component 2 [H]

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MEQTKKRRLIGFIFHHKDLFQSMNILNLLLFIWLLVLTVMVIFSYRTRIIYIKKIKNKRDTRAKRYVIFDIISEDNFEIR
EIEEAVRNSVKELGGKIWLDLSNPKVIMIYNNRGIISTNRIGYKIIIASLPLIKKIKNKEVLLVPRRTTGSLKRAKRLIG
IE

Sequences:

>Translated_162_residues
MEQTKKRRLIGFIFHHKDLFQSMNILNLLLFIWLLVLTVMVIFSYRTRIIYIKKIKNKRDTRAKRYVIFDIISEDNFEIR
EIEEAVRNSVKELGGKIWLDLSNPKVIMIYNNRGIISTNRIGYKIIIASLPLIKKIKNKEVLLVPRRTTGSLKRAKRLIG
IE
>Mature_162_residues
MEQTKKRRLIGFIFHHKDLFQSMNILNLLLFIWLLVLTVMVIFSYRTRIIYIKKIKNKRDTRAKRYVIFDIISEDNFEIR
EIEEAVRNSVKELGGKIWLDLSNPKVIMIYNNRGIISTNRIGYKIIIASLPLIKKIKNKEVLLVPRRTTGSLKRAKRLIG
IE

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends [H]

COG id: COG1369

COG function: function code J; RNase P/RNase MRP subunit POP5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002759 [H]

Pfam domain/function: PF01900 RNase_P_Rpp14 [H]

EC number: =3.1.26.5 [H]

Molecular weight: Translated: 19184; Mature: 19184

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTKKRRLIGFIFHHKDLFQSMNILNLLLFIWLLVLTVMVIFSYRTRIIYIKKIKNKRD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
TRAKRYVIFDIISEDNFEIREIEEAVRNSVKELGGKIWLDLSNPKVIMIYNNRGIISTNR
CCHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCEEEECC
IGYKIIIASLPLIKKIKNKEVLLVPRRTTGSLKRAKRLIGIE
CCEEEEEECCHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MEQTKKRRLIGFIFHHKDLFQSMNILNLLLFIWLLVLTVMVIFSYRTRIIYIKKIKNKRD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
TRAKRYVIFDIISEDNFEIREIEEAVRNSVKELGGKIWLDLSNPKVIMIYNNRGIISTNR
CCHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCEEEECC
IGYKIIIASLPLIKKIKNKEVLLVPRRTTGSLKRAKRLIGIE
CCEEEEEECCHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479 [H]