| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920646
Identifier: 15920646
GI number: 15920646
Start: 441814
End: 443160
Strand: Direct
Name: 15920646
Synonym: ST0435
Alternate gene names: NA
Gene position: 441814-443160 (Clockwise)
Preceding gene: 15920608
Following gene: 15920649
Centisome position: 16.4
GC content: 28.21
Gene sequence:
>1347_bases ATGACATTAAGAGAAAGAGTTAAAGAGTTATCAAAATACGGAGAATTAATAGCTGGTGATAAAAAGGAAAGATTGATAGT TGATAAAATAAAGGAATATTTTGAGGTTAATAAAATAACAACTTACATTAATCCTCAAAATGTATTAAAATGGGAGGAGA AGGAAATAGAGCTAGAATGTGAAGGAATAAAAATCGAGGCTATCTCTTTACCTTACTCTCCTTCAATAGATGTAGAAACT TCAGATTATCAAGTCATTAAAATTAATAATATCTTAGATATTAATAAATATTATAGAAATAATAGTAATAAAATTTTAGT CTTTACACAAGATGATTTAATGAGAAAAATTGTTCTGAAAAACGGGACTCCTCTTTCTCACTTACCTCAAAATCCGCCCA AGTTACCAGCATTTTATATAAGGTATAAAGATGCAAATCAAATAAAAGGAAAATGTAGATTTTTCTTAAAATCATCTTTT GAGGATTCAATAGGATATACAATTGAAGGAATAATACCAGGTAAAACTGAGGATAAGATCTATGTGACCGCTCATCATGA TCATTGGTTTAAGGGGGAACATGATGATTTAATTTCAGTCTCCATATTACCAGAATTAAAAAGTGAAAAATACGAATTAC ACTTAATTTCTTTTACAGCAGAAGAAAGTGGATGTTTTTTCAGTAGTTTTTCGTGGGCTTGTGGTTCATATAATTTTTTG AGGTCAAATAAAATAGATGCAAAATTATCTATAAGTTTAGATAACTTAACCTTAAATTCAAAATTTTTTGTAACTCCAGG TCTTTTTAAGTATTTTAAAAATGCTGTCCAGTACCCTTCACCTTATACCGATTCTTATAACTTTTTAAAGAGGGGAATTC CTACAATTTCGATGTCGGATATAGATTATCCATATTATCATTCAGAAGCTGATGAGATCAGTGAAACTGAGAATTATGAA GAAATAGTAAAGCTTTTAAATGTATTTCTCTCCAACGAGATTACAATAAATCCACAAGAGCTTGTTAACGTAATATTTGA TACGCCATTACCTATAGAAATTAAGGAGTTAGCATTAAATTTGATAGAGCGTGGAAAGTATAATGAACTTTTAAAATTTT ACGGAAGTGTATTAGATTTAAGCAAGAATACAATACAGACTTATTTATTTCATAAACTTGTTGGCATCAATAAAGCATAC CAAAATAGTGTAGCAATAGAAGATTTTGTGGAATTAAGAAATTACTGTGAAGATGAAATATGCAGCAAACTTTATGAGAA ATTTCTGTATTACTTACAAAAAGAAATTACAAATGAATATCTAATTCAACTAAAAAATCTCTTCTAA
Upstream 100 bases:
>100_bases GAGCTAAGTTTGGTTTAACTCCATTTGATCCTAAAATAACTTCATAAATTCCATCATATGGAAAAACAAAATTTATGATA TTTTTTACTGAGTCCATATT
Downstream 100 bases:
>100_bases CTGTTTTAGATTTTGAATTACAAAATCCGCATAAAGTTCTGCGAATTTGACTTTTCCTTCTCTATCAACCAATATGGAAT ATAAACCAGCCTTCTTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MTLRERVKELSKYGELIAGDKKERLIVDKIKEYFEVNKITTYINPQNVLKWEEKEIELECEGIKIEAISLPYSPSIDVET SDYQVIKINNILDINKYYRNNSNKILVFTQDDLMRKIVLKNGTPLSHLPQNPPKLPAFYIRYKDANQIKGKCRFFLKSSF EDSIGYTIEGIIPGKTEDKIYVTAHHDHWFKGEHDDLISVSILPELKSEKYELHLISFTAEESGCFFSSFSWACGSYNFL RSNKIDAKLSISLDNLTLNSKFFVTPGLFKYFKNAVQYPSPYTDSYNFLKRGIPTISMSDIDYPYYHSEADEISETENYE EIVKLLNVFLSNEITINPQELVNVIFDTPLPIEIKELALNLIERGKYNELLKFYGSVLDLSKNTIQTYLFHKLVGINKAY QNSVAIEDFVELRNYCEDEICSKLYEKFLYYLQKEITNEYLIQLKNLF
Sequences:
>Translated_448_residues MTLRERVKELSKYGELIAGDKKERLIVDKIKEYFEVNKITTYINPQNVLKWEEKEIELECEGIKIEAISLPYSPSIDVET SDYQVIKINNILDINKYYRNNSNKILVFTQDDLMRKIVLKNGTPLSHLPQNPPKLPAFYIRYKDANQIKGKCRFFLKSSF EDSIGYTIEGIIPGKTEDKIYVTAHHDHWFKGEHDDLISVSILPELKSEKYELHLISFTAEESGCFFSSFSWACGSYNFL RSNKIDAKLSISLDNLTLNSKFFVTPGLFKYFKNAVQYPSPYTDSYNFLKRGIPTISMSDIDYPYYHSEADEISETENYE EIVKLLNVFLSNEITINPQELVNVIFDTPLPIEIKELALNLIERGKYNELLKFYGSVLDLSKNTIQTYLFHKLVGINKAY QNSVAIEDFVELRNYCEDEICSKLYEKFLYYLQKEITNEYLIQLKNLF >Mature_447_residues TLRERVKELSKYGELIAGDKKERLIVDKIKEYFEVNKITTYINPQNVLKWEEKEIELECEGIKIEAISLPYSPSIDVETS DYQVIKINNILDINKYYRNNSNKILVFTQDDLMRKIVLKNGTPLSHLPQNPPKLPAFYIRYKDANQIKGKCRFFLKSSFE DSIGYTIEGIIPGKTEDKIYVTAHHDHWFKGEHDDLISVSILPELKSEKYELHLISFTAEESGCFFSSFSWACGSYNFLR SNKIDAKLSISLDNLTLNSKFFVTPGLFKYFKNAVQYPSPYTDSYNFLKRGIPTISMSDIDYPYYHSEADEISETENYEE IVKLLNVFLSNEITINPQELVNVIFDTPLPIEIKELALNLIERGKYNELLKFYGSVLDLSKNTIQTYLFHKLVGINKAYQ NSVAIEDFVELRNYCEDEICSKLYEKFLYYLQKEITNEYLIQLKNLF
Specific function: Unknown
COG id: COG4882
COG function: function code R; Predicted aminopeptidase, Iap family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52306; Mature: 52175
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRERVKELSKYGELIAGDKKERLIVDKIKEYFEVNKITTYINPQNVLKWEEKEIELEC CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECHHHHHEECCCCEEEEE EGIKIEAISLPYSPSIDVETSDYQVIKINNILDINKYYRNNSNKILVFTQDDLMRKIVLK CCEEEEEEECCCCCCCCEECCCEEEEEECCEEECHHHHCCCCCEEEEEECHHHHHHHHHC NGTPLSHLPQNPPKLPAFYIRYKDANQIKGKCRFFLKSSFEDSIGYTIEGIIPGKTEDKI CCCCCCCCCCCCCCCCEEEEEECCCCHHCHHHHHEECCCCCCCCCEEEEEEECCCCCCEE YVTAHHDHWFKGEHDDLISVSILPELKSEKYELHLISFTAEESGCFFSSFSWACGSYNFL EEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCEEECCCCCCCCCCHH RSNKIDAKLSISLDNLTLNSKFFVTPGLFKYFKNAVQYPSPYTDSYNFLKRGIPTISMSD CCCCCCEEEEEEEECEEECCEEEECCHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECC IDYPYYHSEADEISETENYEEIVKLLNVFLSNEITINPQELVNVIFDTPLPIEIKELALN CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHCCCCCEEHHHHHHH LIERGKYNELLKFYGSVLDLSKNTIQTYLFHKLVGINKAYQNSVAIEDFVELRNYCEDEI HHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCHHHH CSKLYEKFLYYLQKEITNEYLIQLKNLF HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLRERVKELSKYGELIAGDKKERLIVDKIKEYFEVNKITTYINPQNVLKWEEKEIELEC CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECHHHHHEECCCCEEEEE EGIKIEAISLPYSPSIDVETSDYQVIKINNILDINKYYRNNSNKILVFTQDDLMRKIVLK CCEEEEEEECCCCCCCCEECCCEEEEEECCEEECHHHHCCCCCEEEEEECHHHHHHHHHC NGTPLSHLPQNPPKLPAFYIRYKDANQIKGKCRFFLKSSFEDSIGYTIEGIIPGKTEDKI CCCCCCCCCCCCCCCCEEEEEECCCCHHCHHHHHEECCCCCCCCCEEEEEEECCCCCCEE YVTAHHDHWFKGEHDDLISVSILPELKSEKYELHLISFTAEESGCFFSSFSWACGSYNFL EEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCEEECCCCCCCCCCHH RSNKIDAKLSISLDNLTLNSKFFVTPGLFKYFKNAVQYPSPYTDSYNFLKRGIPTISMSD CCCCCCEEEEEEEECEEECCEEEECCHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECC IDYPYYHSEADEISETENYEEIVKLLNVFLSNEITINPQELVNVIFDTPLPIEIKELALN CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHCCCCCEEHHHHHHH LIERGKYNELLKFYGSVLDLSKNTIQTYLFHKLVGINKAYQNSVAIEDFVELRNYCEDEI HHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCHHHH CSKLYEKFLYYLQKEITNEYLIQLKNLF HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA