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The map label for this gene is cmk

Identifier: 15920615

GI number: 15920615

Start: 421421

End: 421963

Strand: Reverse

Name: cmk

Synonym: ST0408

Alternate gene names: 15920615

Gene position: 421963-421421 (Counterclockwise)

Preceding gene: 15920616

Following gene: 15920614

Centisome position: 15.66

GC content: 26.89

Gene sequence:

>543_bases
ATGATTATTGTTATAAGCGGTCCTCCAGGTAGTGGAAAGTCTACAGTAGCTAAAATCTTGTCCAAGAATCTATCCTTGAA
ATATATTTCTGCAGGGCATATATTTAGAGAATTAGCTGAAAAAGAGGGATTAAGCTTATTAGAACTTAATAAAAAAGCTG
AAGAAAATTTTGAAATAGATAAGAAAATTGATAGAGAAATTTTTAGAATAGCATCTACTGAAAAGAATATTATTATTGAA
TCTCATATAGGAGGTTGGTTATTAAAAGATATAGCTGATATTACAGTATATTTAAATGCTAGCATAGAAATTAGAGCTAT
GCGAATTGCAAAACGTGATAATATTCCTTTTACTAAAGCAATAGAACAAATCATTGAGAGAGAAGAAAGTCATTCTAGAA
GATTTTTAGCTTATTATGGTATTGATTTATCAGATTTATCTGTTTTTGATTTAGTTATAAATACAGATAATTTACAACCA
GATGAAATCAGTAAAATAATAGAAGCATACCTCAATTTTATGTTAGCAAAAAATATTCATTAA

Upstream 100 bases:

>100_bases
AGTATTCTAAAACTGAAAAAAGACCAGAAAGAATGTATGGAGGTTATATTTGTTATAAATGTCTTGAGAACTTAATCAAG
CAAACTTTGAGAGGAAGTTC

Downstream 100 bases:

>100_bases
TCTCTCTCTTGTTATTAAGAGAGCAATATAATTGAACAAAAATGACGCTCTTAAGTTTCATCGAGAATCTAAATAGTACT
ATAACTGAAGTGGCATGGAG

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MIIVISGPPGSGKSTVAKILSKNLSLKYISAGHIFRELAEKEGLSLLELNKKAEENFEIDKKIDREIFRIASTEKNIIIE
SHIGGWLLKDIADITVYLNASIEIRAMRIAKRDNIPFTKAIEQIIEREESHSRRFLAYYGIDLSDLSVFDLVINTDNLQP
DEISKIIEAYLNFMLAKNIH

Sequences:

>Translated_180_residues
MIIVISGPPGSGKSTVAKILSKNLSLKYISAGHIFRELAEKEGLSLLELNKKAEENFEIDKKIDREIFRIASTEKNIIIE
SHIGGWLLKDIADITVYLNASIEIRAMRIAKRDNIPFTKAIEQIIEREESHSRRFLAYYGIDLSDLSVFDLVINTDNLQP
DEISKIIEAYLNFMLAKNIH
>Mature_180_residues
MIIVISGPPGSGKSTVAKILSKNLSLKYISAGHIFRELAEKEGLSLLELNKKAEENFEIDKKIDREIFRIASTEKNIIIE
SHIGGWLLKDIADITVYLNASIEIRAMRIAKRDNIPFTKAIEQIIEREESHSRRFLAYYGIDLSDLSVFDLVINTDNLQP
DEISKIIEAYLNFMLAKNIH

Specific function: Unknown

COG id: COG1102

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 2 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KCY_SULTO (Q975K7)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376284.1
- ProteinModelPortal:   Q975K7
- GeneID:   1458340
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0408
- NMPDR:   fig|273063.1.peg.452
- HOGENOM:   HBG578180
- OMA:   SGCGNTT
- ProtClustDB:   PRK04182
- BioCyc:   STOK273063:ST0408-MONOMER
- BRENDA:   2.7.4.14
- GO:   GO:0005737
- HAMAP:   MF_00239
- InterPro:   IPR000850
- InterPro:   IPR011892
- InterPro:   IPR000623
- PANTHER:   PTHR23359
- PRINTS:   PR01100
- TIGRFAMs:   TIGR02173

Pfam domain/function: PF01202 SKI

EC number: =2.7.4.14

Molecular weight: Translated: 20459; Mature: 20459

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIVISGPPGSGKSTVAKILSKNLSLKYISAGHIFRELAEKEGLSLLELNKKAEENFEID
CEEEEECCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCEEEECCCHHHCCCCHH
KKIDREIFRIASTEKNIIIESHIGGWLLKDIADITVYLNASIEIRAMRIAKRDNIPFTKA
HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHEEEEEECCEEEEEEEEHHCCCCCHHHH
IEQIIEREESHSRRFLAYYGIDLSDLSVFDLVINTDNLQPDEISKIIEAYLNFMLAKNIH
HHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIIVISGPPGSGKSTVAKILSKNLSLKYISAGHIFRELAEKEGLSLLELNKKAEENFEID
CEEEEECCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCEEEECCCHHHCCCCHH
KKIDREIFRIASTEKNIIIESHIGGWLLKDIADITVYLNASIEIRAMRIAKRDNIPFTKA
HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHEEEEEECCEEEEEEEEHHCCCCCHHHH
IEQIIEREESHSRRFLAYYGIDLSDLSVFDLVINTDNLQPDEISKIIEAYLNFMLAKNIH
HHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479