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The map label for this gene is rpl34e

Identifier: 15920616

GI number: 15920616

Start: 421960

End: 422223

Strand: Reverse

Name: rpl34e

Synonym: STS058

Alternate gene names: 15920616

Gene position: 422223-421960 (Counterclockwise)

Preceding gene: 15920617

Following gene: 15920615

Centisome position: 15.67

GC content: 31.06

Gene sequence:

>264_bases
ATGCCTAACCCTCATTATCGTTCTACATCTTATAGAAAAATTCATACAAAACTACCCTCTGGAAAATCAACGATACATTA
CGAAAGAAGAAAAAATAATAGGGCAGTTTGTGCTATATGCAAAAAACCTCTTCAGGGTGTAAAGACAAATTTACTATATA
AGTATTCTAAAACTGAAAAAAGACCAGAAAGAATGTATGGAGGTTATATTTGTTATAAATGTCTTGAGAACTTAATCAAG
CAAACTTTGAGAGGAAGTTCATGA

Upstream 100 bases:

>100_bases
TAAGTAGTTTATTCATCTATATATTATCCTTTTTACTATTTACTCCATTATCGTTAAGGAGACCGAAGACTATTTAAAAC
CTCTGCTCAAATTTTTATAT

Downstream 100 bases:

>100_bases
TTATTGTTATAAGCGGTCCTCCAGGTAGTGGAAAGTCTACAGTAGCTAAAATCTTGTCCAAGAATCTATCCTTGAAATAT
ATTTCTGCAGGGCATATATT

Product: 50S ribosomal protein L34e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MPNPHYRSTSYRKIHTKLPSGKSTIHYERRKNNRAVCAICKKPLQGVKTNLLYKYSKTEKRPERMYGGYICYKCLENLIK
QTLRGSS

Sequences:

>Translated_87_residues
MPNPHYRSTSYRKIHTKLPSGKSTIHYERRKNNRAVCAICKKPLQGVKTNLLYKYSKTEKRPERMYGGYICYKCLENLIK
QTLRGSS
>Mature_86_residues
PNPHYRSTSYRKIHTKLPSGKSTIHYERRKNNRAVCAICKKPLQGVKTNLLYKYSKTEKRPERMYGGYICYKCLENLIKQ
TLRGSS

Specific function: Unknown

COG id: COG2174

COG function: function code J; Ribosomal protein L34E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L34e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL34_SULTO (Q975K6)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376285.1
- GeneID:   1458341
- GenomeReviews:   BA000023_GR
- KEGG:   sto:STS058
- NMPDR:   fig|273063.1.peg.453
- HOGENOM:   HBG553083
- OMA:   RRKYVRT
- ProtClustDB:   PRK04059
- BioCyc:   STOK273063:STS058-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00349
- InterPro:   IPR008195
- InterPro:   IPR018065
- PRINTS:   PR01250

Pfam domain/function: PF01199 Ribosomal_L34e

EC number: NA

Molecular weight: Translated: 10226; Mature: 10095

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: PS01145 RIBOSOMAL_L34E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNPHYRSTSYRKIHTKLPSGKSTIHYERRKNNRAVCAICKKPLQGVKTNLLYKYSKTEK
CCCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCC
RPERMYGGYICYKCLENLIKQTLRGSS
CHHHHHCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PNPHYRSTSYRKIHTKLPSGKSTIHYERRKNNRAVCAICKKPLQGVKTNLLYKYSKTEK
CCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCC
RPERMYGGYICYKCLENLIKQTLRGSS
CHHHHHCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479