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The map label for this gene is rps15p

Identifier: 15920587

GI number: 15920587

Start: 399465

End: 399926

Strand: Reverse

Name: rps15p

Synonym: ST0384

Alternate gene names: 15920587

Gene position: 399926-399465 (Counterclockwise)

Preceding gene: 15920588

Following gene: 161751100

Centisome position: 14.84

GC content: 34.85

Gene sequence:

>462_bases
GTGAATAAGAAACGTCCTAATGGTAAGTCACATTCTACAAGGCCAGTTAGAAGTGGAGCACCTAAGTGGGTTAGGTTTAC
TAGAGAAGAAGTAGAATTATTAGTAGAAGAATTAGCCAAAAAAGGTTATTCACCTAGTATGATAGGTATAATTTTAAGAG
ATCAGTACGGTATTCCTCTAGTAAAACAAATTACTGGAAAAAAACTCACTAAAATCCTAGAAGAAAAAGGGCTTGCTCCA
AAAATACCCGAAGACTTGTTTAATTTAATTAGAAAAGCAGCGAACGTAAGGAGACACTTGTTTGAACATCCTAAGGATAA
GAGGGCTAAAAAAGGATTAGAAGAAATAGAATCTAAAATTAGAAGACTTGCGGATTACTATAAGAGAATAGGTAAATTGC
CTAAAGAATGGAAATATGAGCCAGAGAAAGCAGAGCTATTAGCTTCTGGTGCTGCTTCTTAA

Upstream 100 bases:

>100_bases
ACTCAACATGGTTAAGGGAACGAAAATTGTAAGAGAAGAACTTAAAAATAAAGGTTATAATAGTACTTCACTAAAGCCTT
TGGTAAATAGGTGAATTAGA

Downstream 100 bases:

>100_bases
AACTTCTTCAACTCTTTCTTTTAAAATTTCTGCGATCCTTTCATCAACACCTATAGGTTCTGCAATCATAATTTTTACAC
CTTTTATTTCTTCTAATTGT

Product: 30S ribosomal protein S15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MNKKRPNGKSHSTRPVRSGAPKWVRFTREEVELLVEELAKKGYSPSMIGIILRDQYGIPLVKQITGKKLTKILEEKGLAP
KIPEDLFNLIRKAANVRRHLFEHPKDKRAKKGLEEIESKIRRLADYYKRIGKLPKEWKYEPEKAELLASGAAS

Sequences:

>Translated_153_residues
MNKKRPNGKSHSTRPVRSGAPKWVRFTREEVELLVEELAKKGYSPSMIGIILRDQYGIPLVKQITGKKLTKILEEKGLAP
KIPEDLFNLIRKAANVRRHLFEHPKDKRAKKGLEEIESKIRRLADYYKRIGKLPKEWKYEPEKAELLASGAAS
>Mature_153_residues
MNKKRPNGKSHSTRPVRSGAPKWVRFTREEVELLVEELAKKGYSPSMIGIILRDQYGIPLVKQITGKKLTKILEEKGLAP
KIPEDLFNLIRKAANVRRHLFEHPKDKRAKKGLEEIESKIRRLADYYKRIGKLPKEWKYEPEKAELLASGAAS

Specific function: Unknown

COG id: COG0184

COG function: function code J; Ribosomal protein S15P/S13E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S15P family

Homologues:

Organism=Homo sapiens, GI4506685, Length=142, Percent_Identity=49.2957746478873, Blast_Score=135, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI17554774, Length=142, Percent_Identity=45.0704225352113, Blast_Score=125, Evalue=7e-30,
Organism=Saccharomyces cerevisiae, GI6320269, Length=142, Percent_Identity=46.4788732394366, Blast_Score=129, Evalue=1e-31,
Organism=Drosophila melanogaster, GI85724904, Length=142, Percent_Identity=43.6619718309859, Blast_Score=124, Evalue=3e-29,
Organism=Drosophila melanogaster, GI17136832, Length=142, Percent_Identity=43.6619718309859, Blast_Score=124, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS15_SULTO (Q975N5)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376256.1
- ProteinModelPortal:   Q975N5
- GeneID:   1458309
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0384
- NMPDR:   fig|273063.1.peg.424
- HOGENOM:   HBG747651
- OMA:   IRRLVKY
- ProtClustDB:   PRK08561
- BioCyc:   STOK273063:ST0384-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01343_A
- InterPro:   IPR012606
- InterPro:   IPR000589
- InterPro:   IPR023029
- InterPro:   IPR009068
- Gene3D:   G3DSA:1.10.287.10

Pfam domain/function: PF08069 Ribosomal_S13_N; PF00312 Ribosomal_S15; SSF47060 S15/NS1_bind

EC number: NA

Molecular weight: Translated: 17614; Mature: 17614

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: PS00362 RIBOSOMAL_S15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKRPNGKSHSTRPVRSGAPKWVRFTREEVELLVEELAKKGYSPSMIGIILRDQYGIPL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHH
VKQITGKKLTKILEEKGLAPKIPEDLFNLIRKAANVRRHLFEHPKDKRAKKGLEEIESKI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RRLADYYKRIGKLPKEWKYEPEKAELLASGAAS
HHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MNKKRPNGKSHSTRPVRSGAPKWVRFTREEVELLVEELAKKGYSPSMIGIILRDQYGIPL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHH
VKQITGKKLTKILEEKGLAPKIPEDLFNLIRKAANVRRHLFEHPKDKRAKKGLEEIESKI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RRLADYYKRIGKLPKEWKYEPEKAELLASGAAS
HHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479