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The map label for this gene is rps6e

Identifier: 161751100

GI number: 161751100

Start: 398419

End: 399060

Strand: Reverse

Name: rps6e

Synonym: ST0382

Alternate gene names: 161751100

Gene position: 399060-398419 (Counterclockwise)

Preceding gene: 15920587

Following gene: 15920584

Centisome position: 14.81

GC content: 30.84

Gene sequence:

>642_bases
TTGCCAGACTTTAAAATTGTTATATCTGATCCACAAACAAAAGAATCTAAAATAAAGAAAGTAAAAGTAAAAGTATCTGA
TCAAATTCAATCAATTCAAGGAGAAAAAGAAGGAAAAGCTTTGCCCATTGCGAAAATAAATCAGAAGTTAAAGGAGGAAT
TAGGTTTAGATACTTTACTAACATTACAAACAATAAAACAAGAAGGAGACAAAAAAGTGAAAGTAAAAACCCATTTTAAA
ATAGAAATTGACAATAATGTTCCCTCTGACGAAGTTTGGATTGCAGCTAGCATAGCAGAAAAATATGGAGCTAATGAGTT
TGAAGCAGAAGCTTATAGGACTAAATCTTTTCAATTATCTATAGATCAATCAAAATTAAGCAATATTATAGGAGCAAAAA
TTGGTGATGTAATAGAATTAAATGTGTCTGGAATACCTCTAAAAGTAAAGATAACTGGTGGATCTGATAATTCTGGTTTC
CCAATGAGATATGATGTTCCAGGTGGAGCCAAAAGAAAGCTATTATTAAGTGGACCTCCAGGTTTCTATCCAGAAGAAGA
CGGAATGAGAAGAAAAAAAACTGTTAGAGGAAATATGATTACACAAGATATAGTTCAGATTAACACTATAATTATTAGGT
GA

Upstream 100 bases:

>100_bases
TTACTACCGTGTAGAACTAATAATACTCCATACATACGTATTTTATGTACTTCGATTTTAAATACTTGTATTCTAATTTA
CCTTACCAAGGGATATTAAC

Downstream 100 bases:

>100_bases
TTATGCTTTTGTCTTGGCCACAAGTTCAACCAGAAGTTAACATAGGTGTAGTTGGCCATGTAGATCATGGTAAAACTACA
TTAGTCCAAGCGATTACTGG

Product: 30S ribosomal protein S6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MPDFKIVISDPQTKESKIKKVKVKVSDQIQSIQGEKEGKALPIAKINQKLKEELGLDTLLTLQTIKQEGDKKVKVKTHFK
IEIDNNVPSDEVWIAASIAEKYGANEFEAEAYRTKSFQLSIDQSKLSNIIGAKIGDVIELNVSGIPLKVKITGGSDNSGF
PMRYDVPGGAKRKLLLSGPPGFYPEEDGMRRKKTVRGNMITQDIVQINTIIIR

Sequences:

>Translated_213_residues
MPDFKIVISDPQTKESKIKKVKVKVSDQIQSIQGEKEGKALPIAKINQKLKEELGLDTLLTLQTIKQEGDKKVKVKTHFK
IEIDNNVPSDEVWIAASIAEKYGANEFEAEAYRTKSFQLSIDQSKLSNIIGAKIGDVIELNVSGIPLKVKITGGSDNSGF
PMRYDVPGGAKRKLLLSGPPGFYPEEDGMRRKKTVRGNMITQDIVQINTIIIR
>Mature_212_residues
PDFKIVISDPQTKESKIKKVKVKVSDQIQSIQGEKEGKALPIAKINQKLKEELGLDTLLTLQTIKQEGDKKVKVKTHFKI
EIDNNVPSDEVWIAASIAEKYGANEFEAEAYRTKSFQLSIDQSKLSNIIGAKIGDVIELNVSGIPLKVKITGGSDNSGFP
MRYDVPGGAKRKLLLSGPPGFYPEEDGMRRKKTVRGNMITQDIVQINTIIIR

Specific function: Unknown

COG id: COG2125

COG function: function code J; Ribosomal protein S6E (S10)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S6e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS6E_SULTO (Q975N7)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376254.2
- GeneID:   1458307
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0382
- HOGENOM:   HBG297452
- BioCyc:   STOK273063:ST0382-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00512
- InterPro:   IPR001377
- InterPro:   IPR020924
- InterPro:   IPR018282
- PANTHER:   PTHR11502
- PANTHER:   PTHR11502:SF2

Pfam domain/function: PF01092 Ribosomal_S6e

EC number: NA

Molecular weight: Translated: 23637; Mature: 23506

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00578 RIBOSOMAL_S6E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDFKIVISDPQTKESKIKKVKVKVSDQIQSIQGEKEGKALPIAKINQKLKEELGLDTLL
CCCCEEEECCCCCCCCCEEEEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHH
TLQTIKQEGDKKVKVKTHFKIEIDNNVPSDEVWIAASIAEKYGANEFEAEAYRTKSFQLS
HHHHHHHCCCCEEEEEEEEEEEECCCCCCCCEEEEEEHHHHHCCCCCHHHHEECEEEEEE
IDQSKLSNIIGAKIGDVIELNVSGIPLKVKITGGSDNSGFPMRYDVPGGAKRKLLLSGPP
ECHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEEECCC
GFYPEEDGMRRKKTVRGNMITQDIVQINTIIIR
CCCCCCCCCHHHHHHCCCCHHHHHEEEEEEEEC
>Mature Secondary Structure 
PDFKIVISDPQTKESKIKKVKVKVSDQIQSIQGEKEGKALPIAKINQKLKEELGLDTLL
CCCEEEECCCCCCCCCEEEEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHH
TLQTIKQEGDKKVKVKTHFKIEIDNNVPSDEVWIAASIAEKYGANEFEAEAYRTKSFQLS
HHHHHHHCCCCEEEEEEEEEEEECCCCCCCCEEEEEEHHHHHCCCCCHHHHEECEEEEEE
IDQSKLSNIIGAKIGDVIELNVSGIPLKVKITGGSDNSGFPMRYDVPGGAKRKLLLSGPP
ECHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEEECCC
GFYPEEDGMRRKKTVRGNMITQDIVQINTIIIR
CCCCCCCCCHHHHHHCCCCHHHHHEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479