The gene/protein map for NC_003106 is currently unavailable.
Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

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The map label for this gene is rps24e

Identifier: 15920563

GI number: 15920563

Start: 379794

End: 380156

Strand: Direct

Name: rps24e

Synonym: ST0362

Alternate gene names: 15920563

Gene position: 379794-380156 (Clockwise)

Preceding gene: 15920562

Following gene: 15920564

Centisome position: 14.09

GC content: 30.3

Gene sequence:

>363_bases
ATGAGTGAAGTACAACAAACTAAAATAAAGATTTCAGAAAAAGCTGAGGGTATAGTTGAAAGGGACATAAAAAATAATGT
AATTGGTAGAAGAGAATTATATATTAAAGTTTTTCATATTGGTAGTGGAACGATATCAAGGAAAGATATGATTAAAGCAA
TTGCATCAAGTTATGGAGCTCAAGAAGATCTTGTAGTAATAAAGAAAATTCATACACTTTACGGTGCAGGTATTAGCTAT
GTTAGAGCGAATATATATAATGATAAGAAAACTTTACAAGAGTTTGAACCTCAATATTTAATAGGAAGAGATACTGGTCA
AAAAGTAAAGAAAGGTGGTAAAGGTGCCCAAAAACAAGGATGA

Upstream 100 bases:

>100_bases
CTATCTTTGGTGCTATGGTCTTATCTGGTAAAAGAGTGGCTGAAATAATTATAAAAGATCTCCGTTACTCTTAAAGCCTA
TTATTATATTTTTTATTTCG

Downstream 100 bases:

>100_bases
AAGTCAAAAAGCTATAGTTAGAACCTATTATATAATAGAAGGAGATAAAATTAAACTTAAAAATAAAAAATGTCCTAGAT
GCGGTAGTATTATGGCTCAT

Product: 30S ribosomal protein S24e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSEVQQTKIKISEKAEGIVERDIKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIKKIHTLYGAGISY
VRANIYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQG

Sequences:

>Translated_120_residues
MSEVQQTKIKISEKAEGIVERDIKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIKKIHTLYGAGISY
VRANIYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQG
>Mature_119_residues
SEVQQTKIKISEKAEGIVERDIKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIKKIHTLYGAGISYV
RANIYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQG

Specific function: Unknown

COG id: COG2004

COG function: function code J; Ribosomal protein S24E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S24e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS24_SULTO (Q975Q9)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376232.1
- ProteinModelPortal:   Q975Q9
- SMR:   Q975Q9
- GeneID:   1458285
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0362
- NMPDR:   fig|273063.1.peg.400
- HOGENOM:   HBG553552
- OMA:   TRQSVRE
- ProtClustDB:   PRK01178
- BioCyc:   STOK273063:ST0362-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00545
- InterPro:   IPR012677
- InterPro:   IPR012678
- InterPro:   IPR001976
- InterPro:   IPR018098
- Gene3D:   G3DSA:3.30.70.330
- ProDom:   PD006052

Pfam domain/function: PF01282 Ribosomal_S24e; SSF54189 L23_L15e_core

EC number: NA

Molecular weight: Translated: 13414; Mature: 13283

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS00529 RIBOSOMAL_S24E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVQQTKIKISEKAEGIVERDIKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCC
QEDLVVIKKIHTLYGAGISYVRANIYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQG
CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCEEEECCCCHHHHCCCCCCCCCC
>Mature Secondary Structure 
SEVQQTKIKISEKAEGIVERDIKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCC
QEDLVVIKKIHTLYGAGISYVRANIYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQG
CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCEEEECCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479