| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is rps24e
Identifier: 15920563
GI number: 15920563
Start: 379794
End: 380156
Strand: Direct
Name: rps24e
Synonym: ST0362
Alternate gene names: 15920563
Gene position: 379794-380156 (Clockwise)
Preceding gene: 15920562
Following gene: 15920564
Centisome position: 14.09
GC content: 30.3
Gene sequence:
>363_bases ATGAGTGAAGTACAACAAACTAAAATAAAGATTTCAGAAAAAGCTGAGGGTATAGTTGAAAGGGACATAAAAAATAATGT AATTGGTAGAAGAGAATTATATATTAAAGTTTTTCATATTGGTAGTGGAACGATATCAAGGAAAGATATGATTAAAGCAA TTGCATCAAGTTATGGAGCTCAAGAAGATCTTGTAGTAATAAAGAAAATTCATACACTTTACGGTGCAGGTATTAGCTAT GTTAGAGCGAATATATATAATGATAAGAAAACTTTACAAGAGTTTGAACCTCAATATTTAATAGGAAGAGATACTGGTCA AAAAGTAAAGAAAGGTGGTAAAGGTGCCCAAAAACAAGGATGA
Upstream 100 bases:
>100_bases CTATCTTTGGTGCTATGGTCTTATCTGGTAAAAGAGTGGCTGAAATAATTATAAAAGATCTCCGTTACTCTTAAAGCCTA TTATTATATTTTTTATTTCG
Downstream 100 bases:
>100_bases AAGTCAAAAAGCTATAGTTAGAACCTATTATATAATAGAAGGAGATAAAATTAAACTTAAAAATAAAAAATGTCCTAGAT GCGGTAGTATTATGGCTCAT
Product: 30S ribosomal protein S24e
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSEVQQTKIKISEKAEGIVERDIKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIKKIHTLYGAGISY VRANIYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQG
Sequences:
>Translated_120_residues MSEVQQTKIKISEKAEGIVERDIKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIKKIHTLYGAGISY VRANIYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQG >Mature_119_residues SEVQQTKIKISEKAEGIVERDIKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIKKIHTLYGAGISYV RANIYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQG
Specific function: Unknown
COG id: COG2004
COG function: function code J; Ribosomal protein S24E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein S24e family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RS24_SULTO (Q975Q9)
Other databases:
- EMBL: BA000023 - RefSeq: NP_376232.1 - ProteinModelPortal: Q975Q9 - SMR: Q975Q9 - GeneID: 1458285 - GenomeReviews: BA000023_GR - KEGG: sto:ST0362 - NMPDR: fig|273063.1.peg.400 - HOGENOM: HBG553552 - OMA: TRQSVRE - ProtClustDB: PRK01178 - BioCyc: STOK273063:ST0362-MONOMER - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00545 - InterPro: IPR012677 - InterPro: IPR012678 - InterPro: IPR001976 - InterPro: IPR018098 - Gene3D: G3DSA:3.30.70.330 - ProDom: PD006052
Pfam domain/function: PF01282 Ribosomal_S24e; SSF54189 L23_L15e_core
EC number: NA
Molecular weight: Translated: 13414; Mature: 13283
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: PS00529 RIBOSOMAL_S24E
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVQQTKIKISEKAEGIVERDIKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGA CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCC QEDLVVIKKIHTLYGAGISYVRANIYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQG CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCEEEECCCCHHHHCCCCCCCCCC >Mature Secondary Structure SEVQQTKIKISEKAEGIVERDIKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHCCC QEDLVVIKKIHTLYGAGISYVRANIYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQG CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCEEEECCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572479