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The map label for this gene is fixC [C]

Identifier: 15920562

GI number: 15920562

Start: 378967

End: 379767

Strand: Direct

Name: fixC [C]

Synonym: ST0361

Alternate gene names: 15920562

Gene position: 378967-379767 (Clockwise)

Preceding gene: 15920560

Following gene: 15920563

Centisome position: 14.06

GC content: 36.45

Gene sequence:

>801_bases
ATGGACTCTAATTCAATAAAGGTTAAACAAGTAGATGAGGTTAAAATAAGTAAATACATTTTGAAGTATACTTTTCAAGA
CTGGGAGGATATAGTAGAAAGTGACGTAGTTATAGTAGGGGCTGGTCCTTCTGGAATGACTGCTGCATATTACTTAGCTA
AAGCTGGTCTAAAAACTGTAGTTTTTGAAAGAAGATTAAGTTTTGGTGGTGGTATTGGTGGCGGTGCTATGTTATTTCAT
AAGATAGTTATTGAATCACCAGCTGATGAAATATTGAAAGAAATGAAAATTAAATTAAACAAAGTTGAAGAAGGAGTTTA
TATAGTGGATTCAGCGGAATTTATGGCAAAGTTAGCAGCTTCAGCTATTGACGCTGGAGCTAAGATCATTCATGGAGTAA
CAGTAGATGATGTAATATTTAGAGAAAATCCTCTAAAAGTTGTAGGCGTTGCAGTAGAGTGGACTGCAACACAAATGGCT
GGATTACATGTAGATCCCTTATTTATTTCAGCGAAAGCTGTTGTTGATGCTACTGGTCATGACGCTGAAGTAATTTCTGT
TGCTGCAAGAAAAATTCCGGAATTAAACATAGTTATTCCTGGGGAAAAATCTGCATATAGTGAGACAGCTGAAGAATTAA
CGGTAGAAAATACCGGTATGGTTGCACCTGGTTTATATGCTGCCGGTATGGCTGTAACTGAAGTGAAAGGATTACCAAGA
ATGGGTCCTATCTTTGGTGCTATGGTCTTATCTGGTAAAAGAGTGGCTGAAATAATTATAAAAGATCTCCGTTACTCTTA
A

Upstream 100 bases:

>100_bases
TCGTGTCTAACTGAAAAGGCATAGGTGTTAATTTGGGTTATAAAATAAATAGATTTTTCATAAAAATGCTATATTAGCTA
GTTTATAATCTACTTAATCT

Downstream 100 bases:

>100_bases
AGCCTATTATTATATTTTTTATTTCGATGAGTGAAGTACAACAAACTAAAATAAAGATTTCAGAAAAAGCTGAGGGTATA
GTTGAAAGGGACATAAAAAA

Product: ribulose-1,5-biphosphate synthetase

Products: NA

Alternate protein names: Ribulose 1,5-bisphosphate synthase; RuBP synthase

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MDSNSIKVKQVDEVKISKYILKYTFQDWEDIVESDVVIVGAGPSGMTAAYYLAKAGLKTVVFERRLSFGGGIGGGAMLFH
KIVIESPADEILKEMKIKLNKVEEGVYIVDSAEFMAKLAASAIDAGAKIIHGVTVDDVIFRENPLKVVGVAVEWTATQMA
GLHVDPLFISAKAVVDATGHDAEVISVAARKIPELNIVIPGEKSAYSETAEELTVENTGMVAPGLYAAGMAVTEVKGLPR
MGPIFGAMVLSGKRVAEIIIKDLRYS

Sequences:

>Translated_266_residues
MDSNSIKVKQVDEVKISKYILKYTFQDWEDIVESDVVIVGAGPSGMTAAYYLAKAGLKTVVFERRLSFGGGIGGGAMLFH
KIVIESPADEILKEMKIKLNKVEEGVYIVDSAEFMAKLAASAIDAGAKIIHGVTVDDVIFRENPLKVVGVAVEWTATQMA
GLHVDPLFISAKAVVDATGHDAEVISVAARKIPELNIVIPGEKSAYSETAEELTVENTGMVAPGLYAAGMAVTEVKGLPR
MGPIFGAMVLSGKRVAEIIIKDLRYS
>Mature_266_residues
MDSNSIKVKQVDEVKISKYILKYTFQDWEDIVESDVVIVGAGPSGMTAAYYLAKAGLKTVVFERRLSFGGGIGGGAMLFH
KIVIESPADEILKEMKIKLNKVEEGVYIVDSAEFMAKLAASAIDAGAKIIHGVTVDDVIFRENPLKVVGVAVEWTATQMA
GLHVDPLFISAKAVVDATGHDAEVISVAARKIPELNIVIPGEKSAYSETAEELTVENTGMVAPGLYAAGMAVTEVKGLPR
MGPIFGAMVLSGKRVAEIIIKDLRYS

Specific function: Catalyzes the conversion of ribose 1,5-bisphosphate to ribulose 1,5-bisphosphate (RuBP), the CO(2) acceptor and substrate for RubisCO

COG id: COG1635

COG function: function code H; Flavoprotein involved in thiazole biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the THI4 family

Homologues:

Organism=Saccharomyces cerevisiae, GI6321583, Length=293, Percent_Identity=32.0819112627986, Blast_Score=118, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUBPS_SULTO (Q975R0)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376231.1
- HSSP:   Q38814
- ProteinModelPortal:   Q975R0
- SMR:   Q975R0
- GeneID:   1458284
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0361
- NMPDR:   fig|273063.1.peg.399
- HOGENOM:   HBG325902
- OMA:   GLHVDPL
- ProtClustDB:   PRK04176
- BioCyc:   STOK273063:ST0361-MONOMER
- HAMAP:   MF_00304
- InterPro:   IPR013027
- InterPro:   IPR002922
- InterPro:   IPR022828
- PRINTS:   PR00368
- TIGRFAMs:   TIGR00292

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28473; Mature: 28473

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSNSIKVKQVDEVKISKYILKYTFQDWEDIVESDVVIVGAGPSGMTAAYYLAKAGLKTV
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCHHHH
VFERRLSFGGGIGGGAMLFHKIVIESPADEILKEMKIKLNKVEEGVYIVDSAEFMAKLAA
HHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHH
SAIDAGAKIIHGVTVDDVIFRENPLKVVGVAVEWTATQMAGLHVDPLFISAKAVVDATGH
HHHHCCCCEEECCCHHHEEECCCCCEEEEEEEEEEHHHHCCCCCCCEEEEEEEEEECCCC
DAEVISVAARKIPELNIVIPGEKSAYSETAEELTVENTGMVAPGLYAAGMAVTEVKGLPR
CHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHEECCCCCCCCCHHHHCCHHHHHCCCCC
MGPIFGAMVLSGKRVAEIIIKDLRYS
CCHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSNSIKVKQVDEVKISKYILKYTFQDWEDIVESDVVIVGAGPSGMTAAYYLAKAGLKTV
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCHHHH
VFERRLSFGGGIGGGAMLFHKIVIESPADEILKEMKIKLNKVEEGVYIVDSAEFMAKLAA
HHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHH
SAIDAGAKIIHGVTVDDVIFRENPLKVVGVAVEWTATQMAGLHVDPLFISAKAVVDATGH
HHHHCCCCEEECCCHHHEEECCCCCEEEEEEEEEEHHHHCCCCCCCEEEEEEEEEECCCC
DAEVISVAARKIPELNIVIPGEKSAYSETAEELTVENTGMVAPGLYAAGMAVTEVKGLPR
CHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHEECCCCCCCCCHHHHCCHHHHHCCCCC
MGPIFGAMVLSGKRVAEIIIKDLRYS
CCHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on NADH or NADPH; With a quinone or similar compound as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479