| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15920401
Identifier: 15920401
GI number: 15920401
Start: 241492
End: 242409
Strand: Direct
Name: 15920401
Synonym: ST0219
Alternate gene names: NA
Gene position: 241492-242409 (Clockwise)
Preceding gene: 15920399
Following gene: 15920402
Centisome position: 8.96
GC content: 27.45
Gene sequence:
>918_bases ATGATCCTAGATGGAGACTATCACTCTTTATATAAAGGAATTATAACGTTAGATGAATATTTAAAAACTATCGAACTCAC ATACTCATTTTTTCTTAATTATACATTATTTATGCTAGAAAATACTAGTTGGGATTTCGCTATTACATATCTACCAATAG TAGATAACCTCCAACATTTACTTTACGGTATTAACGAAGAAAAAGCCTTTGAACATATAGTAAAAGGATACGAAATGGCA GATGAATTTATTAGAGCACAACTTAATTATGCAGACGTATTTTTCGTGTGTTCTGACCATGGAATAGCTGAAGTTGAGAA GAAAATTTTTATAAATAAGTTTCTTGAAAAAATTAATGTATTGAAATTAAATGATAATGAAGAAATAGATTGGAGTAAAA CAAAAGCATATTACGGTGGAGGAGGCCAAATAAGAATCAATTTAAAAAATAGAGAAAAAAACGGTATAGTGTCACATAGG GAATTCCCAAAATTAGTAAGATATATAGTAAGAAACTTAGAAAATTTAGTTGATGAAGAAAAAAATGAAAGAATTTTTAC ATCTATTGTAGCAAGAGAATCTCCTGCTAATGATAGGGAAGGAGATATTTATATCACAGGTCTTAAAGAGAAATACGGAA TAAGTAGTTTAGTTAAAAAAGATATGAACATAATAGAAAAAATTGAATATTACAAAATGACATCAGGAGAACATGGTTAT TTTAGAAAGGATGATCTTTACGGTATTATTATATTTTATGATAAGAAGAGTAATACAAGGAGAAAATTTATTTCAAATGC AAAAATAATAGATGTGGCACCTACGATCTTGAAATTATTTAACGTAACAAATGTTAAAATGGATGGAAAGCCTATTATTA CATTAGTAGAAAAGTATGGAGATCTCAACAATTATTAG
Upstream 100 bases:
>100_bases GAACGTATATGTAAGTCCTATTAGTTTCTTCAATTATAAATGGGGAAATAATACTGAATTACAAGAAAAAATATGGAATT TTATAGTAAGTAAACATGGA
Downstream 100 bases:
>100_bases TAAAAGAAAAAGAAGGGTTATAGGAATTAGTTATTATGAAGAAGGATTACCTCATGTAGAAGTAAATCTTAATGGGAAAA AAATTAATCTTGCAAACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Type I Phosphodiesterase/Nucleotidepyro Phosphatase
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MILDGDYHSLYKGIITLDEYLKTIELTYSFFLNYTLFMLENTSWDFAITYLPIVDNLQHLLYGINEEKAFEHIVKGYEMA DEFIRAQLNYADVFFVCSDHGIAEVEKKIFINKFLEKINVLKLNDNEEIDWSKTKAYYGGGGQIRINLKNREKNGIVSHR EFPKLVRYIVRNLENLVDEEKNERIFTSIVARESPANDREGDIYITGLKEKYGISSLVKKDMNIIEKIEYYKMTSGEHGY FRKDDLYGIIIFYDKKSNTRRKFISNAKIIDVAPTILKLFNVTNVKMDGKPIITLVEKYGDLNNY
Sequences:
>Translated_305_residues MILDGDYHSLYKGIITLDEYLKTIELTYSFFLNYTLFMLENTSWDFAITYLPIVDNLQHLLYGINEEKAFEHIVKGYEMA DEFIRAQLNYADVFFVCSDHGIAEVEKKIFINKFLEKINVLKLNDNEEIDWSKTKAYYGGGGQIRINLKNREKNGIVSHR EFPKLVRYIVRNLENLVDEEKNERIFTSIVARESPANDREGDIYITGLKEKYGISSLVKKDMNIIEKIEYYKMTSGEHGY FRKDDLYGIIIFYDKKSNTRRKFISNAKIIDVAPTILKLFNVTNVKMDGKPIITLVEKYGDLNNY >Mature_305_residues MILDGDYHSLYKGIITLDEYLKTIELTYSFFLNYTLFMLENTSWDFAITYLPIVDNLQHLLYGINEEKAFEHIVKGYEMA DEFIRAQLNYADVFFVCSDHGIAEVEKKIFINKFLEKINVLKLNDNEEIDWSKTKAYYGGGGQIRINLKNREKNGIVSHR EFPKLVRYIVRNLENLVDEEKNERIFTSIVARESPANDREGDIYITGLKEKYGISSLVKKDMNIIEKIEYYKMTSGEHGY FRKDDLYGIIIFYDKKSNTRRKFISNAKIIDVAPTILKLFNVTNVKMDGKPIITLVEKYGDLNNY
Specific function: Unknown
COG id: COG3379
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35716; Mature: 35716
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILDGDYHSLYKGIITLDEYLKTIELTYSFFLNYTLFMLENTSWDFAITYLPIVDNLQHL CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEHHHHHHHHH LYGINEEKAFEHIVKGYEMADEFIRAQLNYADVFFVCSDHGIAEVEKKIFINKFLEKINV HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCEE LKLNDNEEIDWSKTKAYYGGGGQIRINLKNREKNGIVSHREFPKLVRYIVRNLENLVDEE EEECCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC KNERIFTSIVARESPANDREGDIYITGLKEKYGISSLVKKDMNIIEKIEYYKMTSGEHGY CCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHCHHHHHHHHHHHHHHHHHHEECCCCCCC FRKDDLYGIIIFYDKKSNTRRKFISNAKIIDVAPTILKLFNVTNVKMDGKPIITLVEKYG EECCCCEEEEEEEECCCCHHHHHHCCCEEEEHHHHHHHHHHHCEEEECCCHHHHHHHHHC DLNNY CCCCC >Mature Secondary Structure MILDGDYHSLYKGIITLDEYLKTIELTYSFFLNYTLFMLENTSWDFAITYLPIVDNLQHL CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEHHHHHHHHH LYGINEEKAFEHIVKGYEMADEFIRAQLNYADVFFVCSDHGIAEVEKKIFINKFLEKINV HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCEE LKLNDNEEIDWSKTKAYYGGGGQIRINLKNREKNGIVSHREFPKLVRYIVRNLENLVDEE EEECCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC KNERIFTSIVARESPANDREGDIYITGLKEKYGISSLVKKDMNIIEKIEYYKMTSGEHGY CCCHHHHHHHHCCCCCCCCCCCEEEEECCHHHCHHHHHHHHHHHHHHHHHHEECCCCCCC FRKDDLYGIIIFYDKKSNTRRKFISNAKIIDVAPTILKLFNVTNVKMDGKPIITLVEKYG EECCCCEEEEEEEECCCCHHHHHHCCCEEEEHHHHHHHHHHHCEEEECCCHHHHHHHHHC DLNNY CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA