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The map label for this gene is 15920179

Identifier: 15920179

GI number: 15920179

Start: 13440

End: 14279

Strand: Direct

Name: 15920179

Synonym: ST0009

Alternate gene names: NA

Gene position: 13440-14279 (Clockwise)

Preceding gene: 15920178

Following gene: 15920181

Centisome position: 0.5

GC content: 37.5

Gene sequence:

>840_bases
ATGGTAGACTATACCTTTATCAGAAAGGATGTAATAAAGAGACAAACCGTAATTGAGGGAATTTTAGAGGTACAATCCCC
TCTAAGGATAGGAGTCGGGAAATTTGGTGGAATGGATCCTGCCAGCATTGCTAGAGATACGGTATTAAAAGACGCTGAAG
GAACTCCTATAATTCCCGGATCTTCTTGGAAGGGAGTATTTAGGTCTGAAGGAGAGAGAGTATTAAAAAGAAGGAATCTT
ATCACATGTAGCGGTGTAGGAAGGGATTATTGTTTAAATAACTTTAGAAAATACGATGATTTCCAGAGAAGCCTAAGAGA
AAACTACATTGAGGATGCATTAAAAACATTCTGGAATTATACTTGTCTTAATTGTAAACTCTTCGGTACTATGAGCGTAA
TAGGGGCTGTTAAGTTTTTAGAGTCTAGGGCTATTGAGTTTAAACTCGGTACTAGGACAATGGTTGCTATAAGTAGAACT
GAAGGAGCTGCTGCAAGAGGCGCTCTGGTTCAAGTTGAATTTGTAGAGCCTGGGTCTAAATTCACGTTTAAAATCATCGG
AAATAATTTGCCCAATTATGCAATAGGTTACTTATTAACTATTATGAAGAACATCCATGACGGTTTTGTACAAATAGGTG
GACATAAGAGTAGGGGATTCGGACTTGTAAAATTCGTTAATTTAAGGTTCTTAGACAAAGGTGAGAAGAAAATAGGGGAT
GAGGATATTCCAGTATCAATGCAAGATGAAATAAAGGAAGATGGGGATAAGTTTTTCGAAAAGATGAAACCGTTCATGGA
GGCGTTTAATAATGCAAAGATTCCATACCCAGTACACTGA

Upstream 100 bases:

>100_bases
GTTTCGGGCTAGTCAAATTAACATCCGGGGAAATTGAAGTACGCAAATCACCAGACCTTATGAAATCCATTAAATTAGAC
CTTATGGAGGTGGCTAAGTC

Downstream 100 bases:

>100_bases
AAGGAACAGTATAGGATTAGAAGGAGTTCTGGAGTTAGAAATGGAAGTAGTGTCTGATTATCTACATGTAGGTAGTGGGG
TTTATGACGTAGAAATAATA

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Csm3 Family Protein; CRISPR-Associated Csx7 Family Protein; Crispr-Associated Ramp Protein

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MVDYTFIRKDVIKRQTVIEGILEVQSPLRIGVGKFGGMDPASIARDTVLKDAEGTPIIPGSSWKGVFRSEGERVLKRRNL
ITCSGVGRDYCLNNFRKYDDFQRSLRENYIEDALKTFWNYTCLNCKLFGTMSVIGAVKFLESRAIEFKLGTRTMVAISRT
EGAAARGALVQVEFVEPGSKFTFKIIGNNLPNYAIGYLLTIMKNIHDGFVQIGGHKSRGFGLVKFVNLRFLDKGEKKIGD
EDIPVSMQDEIKEDGDKFFEKMKPFMEAFNNAKIPYPVH

Sequences:

>Translated_279_residues
MVDYTFIRKDVIKRQTVIEGILEVQSPLRIGVGKFGGMDPASIARDTVLKDAEGTPIIPGSSWKGVFRSEGERVLKRRNL
ITCSGVGRDYCLNNFRKYDDFQRSLRENYIEDALKTFWNYTCLNCKLFGTMSVIGAVKFLESRAIEFKLGTRTMVAISRT
EGAAARGALVQVEFVEPGSKFTFKIIGNNLPNYAIGYLLTIMKNIHDGFVQIGGHKSRGFGLVKFVNLRFLDKGEKKIGD
EDIPVSMQDEIKEDGDKFFEKMKPFMEAFNNAKIPYPVH
>Mature_279_residues
MVDYTFIRKDVIKRQTVIEGILEVQSPLRIGVGKFGGMDPASIARDTVLKDAEGTPIIPGSSWKGVFRSEGERVLKRRNL
ITCSGVGRDYCLNNFRKYDDFQRSLRENYIEDALKTFWNYTCLNCKLFGTMSVIGAVKFLESRAIEFKLGTRTMVAISRT
EGAAARGALVQVEFVEPGSKFTFKIIGNNLPNYAIGYLLTIMKNIHDGFVQIGGHKSRGFGLVKFVNLRFLDKGEKKIGD
EDIPVSMQDEIKEDGDKFFEKMKPFMEAFNNAKIPYPVH

Specific function: Unknown

COG id: COG1337

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31507; Mature: 31507

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDYTFIRKDVIKRQTVIEGILEVQSPLRIGVGKFGGMDPASIARDTVLKDAEGTPIIPG
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
SSWKGVFRSEGERVLKRRNLITCSGVGRDYCLNNFRKYDDFQRSLRENYIEDALKTFWNY
CCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TCLNCKLFGTMSVIGAVKFLESRAIEFKLGTRTMVAISRTEGAAARGALVQVEFVEPGSK
EEEEEEEHHHHHHHHHHHHHHHHCEEEEECCEEEEEEECCCCCCCCCCEEEEEEECCCCC
FTFKIIGNNLPNYAIGYLLTIMKNIHDGFVQIGGHKSRGFGLVKFVNLRFLDKGEKKIGD
EEEEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEEEHEECCCHHHCCC
EDIPVSMQDEIKEDGDKFFEKMKPFMEAFNNAKIPYPVH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVDYTFIRKDVIKRQTVIEGILEVQSPLRIGVGKFGGMDPASIARDTVLKDAEGTPIIPG
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
SSWKGVFRSEGERVLKRRNLITCSGVGRDYCLNNFRKYDDFQRSLRENYIEDALKTFWNY
CCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TCLNCKLFGTMSVIGAVKFLESRAIEFKLGTRTMVAISRTEGAAARGALVQVEFVEPGSK
EEEEEEEHHHHHHHHHHHHHHHHCEEEEECCEEEEEEECCCCCCCCCCEEEEEEECCCCC
FTFKIIGNNLPNYAIGYLLTIMKNIHDGFVQIGGHKSRGFGLVKFVNLRFLDKGEKKIGD
EEEEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEEEHEECCCHHHCCC
EDIPVSMQDEIKEDGDKFFEKMKPFMEAFNNAKIPYPVH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA