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The map label for this gene is 15920178

Identifier: 15920178

GI number: 15920178

Start: 12718

End: 13446

Strand: Direct

Name: 15920178

Synonym: ST0008

Alternate gene names: NA

Gene position: 12718-13446 (Clockwise)

Preceding gene: 15920177

Following gene: 15920179

Centisome position: 0.47

GC content: 35.12

Gene sequence:

>729_bases
ATGAACGATGAAAAACCTTGTTATGATCTAGATGTTATCAGAAGTATAATAAAAATTAGTGGAAAAATAAAAAATGAAAC
ACCTCTGAGAATTGGATATGGAAAGTCTCAGAGTTTCACAGATCCCACAGATAATCCCATATTAAAAGTAAATGAAAGAC
CGATTATTCCAGGATCGAGTTTTAAAGGAGCTCTAAGGAGTTTGGCAGAAGCTTACGTAAAATCGTGGAATGATCCAAGA
TATATTGTATGTGATTTGGATGATAATAAATGTACTAGTTGTAATGGTGAAGAAAAATACTGTATACCTTGCATAATTTT
CGGCTTCAAGGATCTCTCTTCTAGGGTTTATATACTAGATGCTGTTGCTGAGGAATACTCTATTTCCCAAAGGACAATGG
TTACAATAAATAGAGTTTTCGGAGGTCAATTACCCGGTCATCTTTACACATTAGATTACGTAGAACCTAACTCTGTTTTC
AACTTCTCAATGTTCCTATATAACCTAAACATAGTTGATGGAGAAACGGAAGAATGGAGAAAGAAAGCGGTTGAAGTTGT
AAGGTATTTATTAAAAACCCTAATTACTGACGGAATATTTATAGGAGCTAAGAAGAGTGCTGGTTTCGGGCTAGTCAAAT
TAACATCCGGGGAAATTGAAGTACGCAAATCACCAGACCTTATGAAATCCATTAAATTAGACCTTATGGAGGTGGCTAAG
TCATGGTAG

Upstream 100 bases:

>100_bases
ATTTATGAAACTTTAGACGGTCTTGAAATAGATGTAACACAACTTAAAGGTGTTGATAATTTCCAGAAATTAGTAAACGA
ATTAGTAAAGAGGATGTGAA

Downstream 100 bases:

>100_bases
ACTATACCTTTATCAGAAAGGATGTAATAAAGAGACAAACCGTAATTGAGGGAATTTTAGAGGTACAATCCCCTCTAAGG
ATAGGAGTCGGGAAATTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Csx7 Family Protein; CRISPR-Associated Csm3 Family Protein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MNDEKPCYDLDVIRSIIKISGKIKNETPLRIGYGKSQSFTDPTDNPILKVNERPIIPGSSFKGALRSLAEAYVKSWNDPR
YIVCDLDDNKCTSCNGEEKYCIPCIIFGFKDLSSRVYILDAVAEEYSISQRTMVTINRVFGGQLPGHLYTLDYVEPNSVF
NFSMFLYNLNIVDGETEEWRKKAVEVVRYLLKTLITDGIFIGAKKSAGFGLVKLTSGEIEVRKSPDLMKSIKLDLMEVAK
SW

Sequences:

>Translated_242_residues
MNDEKPCYDLDVIRSIIKISGKIKNETPLRIGYGKSQSFTDPTDNPILKVNERPIIPGSSFKGALRSLAEAYVKSWNDPR
YIVCDLDDNKCTSCNGEEKYCIPCIIFGFKDLSSRVYILDAVAEEYSISQRTMVTINRVFGGQLPGHLYTLDYVEPNSVF
NFSMFLYNLNIVDGETEEWRKKAVEVVRYLLKTLITDGIFIGAKKSAGFGLVKLTSGEIEVRKSPDLMKSIKLDLMEVAK
SW
>Mature_242_residues
MNDEKPCYDLDVIRSIIKISGKIKNETPLRIGYGKSQSFTDPTDNPILKVNERPIIPGSSFKGALRSLAEAYVKSWNDPR
YIVCDLDDNKCTSCNGEEKYCIPCIIFGFKDLSSRVYILDAVAEEYSISQRTMVTINRVFGGQLPGHLYTLDYVEPNSVF
NFSMFLYNLNIVDGETEEWRKKAVEVVRYLLKTLITDGIFIGAKKSAGFGLVKLTSGEIEVRKSPDLMKSIKLDLMEVAK
SW

Specific function: Unknown

COG id: COG1337

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27352; Mature: 27352

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDEKPCYDLDVIRSIIKISGKIKNETPLRIGYGKSQSFTDPTDNPILKVNERPIIPGSS
CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCC
FKGALRSLAEAYVKSWNDPRYIVCDLDDNKCTSCNGEEKYCIPCIIFGFKDLSSRVYILD
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCHHHCCEEEEEE
AVAEEYSISQRTMVTINRVFGGQLPGHLYTLDYVEPNSVFNFSMFLYNLNIVDGETEEWR
EHHHHHCCCCHHEEEEEHHHCCCCCCCEEEEEEECCCCEEEEEEEEEEEEEECCCHHHHH
KKAVEVVRYLLKTLITDGIFIGAKKSAGFGLVKLTSGEIEVRKSPDLMKSIKLDLMEVAK
HHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHH
SW
CC
>Mature Secondary Structure
MNDEKPCYDLDVIRSIIKISGKIKNETPLRIGYGKSQSFTDPTDNPILKVNERPIIPGSS
CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCC
FKGALRSLAEAYVKSWNDPRYIVCDLDDNKCTSCNGEEKYCIPCIIFGFKDLSSRVYILD
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCHHHCCEEEEEE
AVAEEYSISQRTMVTINRVFGGQLPGHLYTLDYVEPNSVFNFSMFLYNLNIVDGETEEWR
EHHHHHCCCCHHEEEEEHHHCCCCCCCEEEEEEECCCCEEEEEEEEEEEEEECCCHHHHH
KKAVEVVRYLLKTLITDGIFIGAKKSAGFGLVKLTSGEIEVRKSPDLMKSIKLDLMEVAK
HHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHH
SW
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA