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The map label for this gene is yebC [C]

Identifier: 161723846

GI number: 161723846

Start: 660610

End: 661371

Strand: Reverse

Name: yebC [C]

Synonym: RC0681

Alternate gene names: 161723846

Gene position: 661371-660610 (Counterclockwise)

Preceding gene: 15892605

Following gene: 15892603

Centisome position: 52.13

GC content: 34.12

Gene sequence:

>762_bases
ATGGCCGGTCATTCAAAGTTCAAAAATATTCAGCATCGTAAAGGGGCTCAAGATAAAAAAAGAGCAAAAGTTTTCACTAA
ATTAATTCGTGAAATAGTTACTGCAGCTAAAACCGGTTCTTCTAATAACCCTGAAAATAATCCACGTCTTAGAAATGCTT
TAACCGCTGCACGTAGTCAAAATCTCCCTAAAGAAAGAATAGATAAAGCTATTAATAGTGCTAATGATTCTTCTAATAAC
GAAAATTATACGGAAATTAGATATGAAGGTTATGCACCGAATGGTATTGCTATAATAGTTGAAGCTTTAACCGATAATAA
AAACCGCACTGCTGCAGAAGTACGCTCTAGTTTTACTAAATATGGTGGGAGTTTAGGCGAAACCGGTAGTGTCAATTATT
TATTCAACCATTGCGGAGTTATTCAGTATCCAATAAATATAGCATCTAATAAAGATATTTTAGAGGCAGTCATAGAAGCC
GGGGGGCATGATATTATATCCGATGATACCACCCATACAATCTATACGGATATTGAAAATTTCTCTAAAGTTCTAGAATT
TTTAACTGGCAAATACGGCATACCTGAAGATTCGTATATAGGCTGGATCCCATTAAATACAATAATTATAGATGATAAGG
AAAAAGCCGAAAAATTACTAAAGCTTGTGGAAGTTTTAGAAGAAAGCGATGATGTGCAAAGAGTTTTTGGGAATTATGAG
TTATCTGATGATGTTTACGAAATAATACAAGGAGAACCATGA

Upstream 100 bases:

>100_bases
GTTTGCAGACTCCTTGCTCTTTTTCCAGTTGATCTTCGTATATTACTTTTCATTTTACTTCAGAGTATATAATACTACTT
TTGAAAGAAAAGAAATAAAT

Downstream 100 bases:

>100_bases
CTTATAACGATGCAAATTATCAAATAATTATTTTAGCAGCCGGTAAAGGTACTAGAATGGAGTCCGATTTACCGAAAGTA
ATGCATAAAGTCGGTGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MAGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQNLPKERIDKAINSANDSSNN
ENYTEIRYEGYAPNGIAIIVEALTDNKNRTAAEVRSSFTKYGGSLGETGSVNYLFNHCGVIQYPINIASNKDILEAVIEA
GGHDIISDDTTHTIYTDIENFSKVLEFLTGKYGIPEDSYIGWIPLNTIIIDDKEKAEKLLKLVEVLEESDDVQRVFGNYE
LSDDVYEIIQGEP

Sequences:

>Translated_253_residues
MAGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQNLPKERIDKAINSANDSSNN
ENYTEIRYEGYAPNGIAIIVEALTDNKNRTAAEVRSSFTKYGGSLGETGSVNYLFNHCGVIQYPINIASNKDILEAVIEA
GGHDIISDDTTHTIYTDIENFSKVLEFLTGKYGIPEDSYIGWIPLNTIIIDDKEKAEKLLKLVEVLEESDDVQRVFGNYE
LSDDVYEIIQGEP
>Mature_252_residues
AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQNLPKERIDKAINSANDSSNNE
NYTEIRYEGYAPNGIAIIVEALTDNKNRTAAEVRSSFTKYGGSLGETGSVNYLFNHCGVIQYPINIASNKDILEAVIEAG
GHDIISDDTTHTIYTDIENFSKVLEFLTGKYGIPEDSYIGWIPLNTIIIDDKEKAEKLLKLVEVLEESDDVQRVFGNYEL
SDDVYEIIQGEP

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=249, Percent_Identity=28.1124497991968, Blast_Score=95, Evalue=7e-20,
Organism=Escherichia coli, GI1788171, Length=247, Percent_Identity=46.5587044534413, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1788294, Length=245, Percent_Identity=35.5102040816327, Blast_Score=123, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17556100, Length=246, Percent_Identity=28.0487804878049, Blast_Score=67, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=32.6996197718631, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24583305, Length=144, Percent_Identity=31.9444444444444, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 28200; Mature: 28069

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQ
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
NLPKERIDKAINSANDSSNNENYTEIRYEGYAPNGIAIIVEALTDNKNRTAAEVRSSFTK
CCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHH
YGGSLGETGSVNYLFNHCGVIQYPINIASNKDILEAVIEAGGHDIISDDTTHTIYTDIEN
HCCCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
FSKVLEFLTGKYGIPEDSYIGWIPLNTIIIDDKEKAEKLLKLVEVLEESDDVQRVFGNYE
HHHHHHHHHCCCCCCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCCC
LSDDVYEIIQGEP
CCHHHHHHHCCCC
>Mature Secondary Structure 
AGHSKFKNIQHRKGAQDKKRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQ
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
NLPKERIDKAINSANDSSNNENYTEIRYEGYAPNGIAIIVEALTDNKNRTAAEVRSSFTK
CCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHH
YGGSLGETGSVNYLFNHCGVIQYPINIASNKDILEAVIEAGGHDIISDDTTHTIYTDIEN
HCCCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
FSKVLEFLTGKYGIPEDSYIGWIPLNTIIIDDKEKAEKLLKLVEVLEESDDVQRVFGNYE
HHHHHHHHHCCCCCCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCCC
LSDDVYEIIQGEP
CCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA