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The map label for this gene is 15893295

Identifier: 15893295

GI number: 15893295

Start: 1265874

End: 1266311

Strand: Reverse

Name: 15893295

Synonym: RC1372

Alternate gene names: NA

Gene position: 1266311-1265874 (Counterclockwise)

Preceding gene: 15893296

Following gene: 15893294

Centisome position: 99.81

GC content: 31.51

Gene sequence:

>438_bases
ATGGCAAGTTACTATCTATGGTTTAAGTCATTTCATCTGATATCTGCTATATGTTGGATGGCAGGGCTTCTTTATTTACC
TAGAATATATGTTTATCATATCAAAGCTAAAATAGGTAGTGAGCTAGATAGTACTTTACAAGTAATGGAACTAAAATTAC
TCAGATTCATTATGAATCCAGCAATGATTAGCACATTTATTTTTGGTTTAATAAATGCTCATATTTACGGGTTTGTTGCT
CTTGATACTTGGTTTCACATCAAAATGTTTGCAGTATTAATTTTAGTGATATTTCACGGTTTACTTGCAAGATGGCGAAA
AGATTTTGCAAATGGTAAAAATGTCCATTCAGAAAAATTTTATCGCATAGTTAATGAGATTCCGGCTATTTGCATGATTG
TTGCAGTGATTATGGTTATAGTGAAACCATTTGACTAG

Upstream 100 bases:

>100_bases
AGGTTGATACTAATTTAGTTATGAGTAGCTCTAGTACAAGAATATGTCCAAACGAATTTACTAAATGTTTGTGTAAATTA
ACAAGTTAATAAGGAAAAGA

Downstream 100 bases:

>100_bases
TATACTCTTTGTTATTTGAAAAGGGATTGTTAAAGATATATCGTCATTGCGAACAGGAAATAATAACAAACTTCTAAGAT
TGTGTTTCGTCAATATTTTC

Product: putative integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MASYYLWFKSFHLISAICWMAGLLYLPRIYVYHIKAKIGSELDSTLQVMELKLLRFIMNPAMISTFIFGLINAHIYGFVA
LDTWFHIKMFAVLILVIFHGLLARWRKDFANGKNVHSEKFYRIVNEIPAICMIVAVIMVIVKPFD

Sequences:

>Translated_145_residues
MASYYLWFKSFHLISAICWMAGLLYLPRIYVYHIKAKIGSELDSTLQVMELKLLRFIMNPAMISTFIFGLINAHIYGFVA
LDTWFHIKMFAVLILVIFHGLLARWRKDFANGKNVHSEKFYRIVNEIPAICMIVAVIMVIVKPFD
>Mature_144_residues
ASYYLWFKSFHLISAICWMAGLLYLPRIYVYHIKAKIGSELDSTLQVMELKLLRFIMNPAMISTFIFGLINAHIYGFVAL
DTWFHIKMFAVLILVIFHGLLARWRKDFANGKNVHSEKFYRIVNEIPAICMIVAVIMVIVKPFD

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR005265 [H]

Pfam domain/function: PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 16908; Mature: 16777

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASYYLWFKSFHLISAICWMAGLLYLPRIYVYHIKAKIGSELDSTLQVMELKLLRFIMNP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AMISTFIFGLINAHIYGFVALDTWFHIKMFAVLILVIFHGLLARWRKDFANGKNVHSEKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
YRIVNEIPAICMIVAVIMVIVKPFD
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASYYLWFKSFHLISAICWMAGLLYLPRIYVYHIKAKIGSELDSTLQVMELKLLRFIMNP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AMISTFIFGLINAHIYGFVALDTWFHIKMFAVLILVIFHGLLARWRKDFANGKNVHSEKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
YRIVNEIPAICMIVAVIMVIVKPFD
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]