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The map label for this gene is yigC [C]

Identifier: 15893194

GI number: 15893194

Start: 1171931

End: 1173409

Strand: Reverse

Name: yigC [C]

Synonym: RC1271

Alternate gene names: 15893194

Gene position: 1173409-1171931 (Counterclockwise)

Preceding gene: 15893195

Following gene: 15893193

Centisome position: 92.49

GC content: 36.44

Gene sequence:

>1479_bases
ATGAGCTTTAAAGATTTACCGGAGTTTTTAAAATTTTTAGAAAAAAACGGTGAGTTAAAGCGTATTGCTCTTGAGGTTAA
AACTGACTTAGAAATTACTGAAATTAGTAGAAGAGTATTAGCACAAGGCGGACCTGCATTACTTTTTGAAAATGTTATAA
AAGTCGACGGCATTAAGTCCGACATACCTGTTCTAACTAATCTTTATGCTAGTATAAATCGTATTTGTATGGGGCTTAAA
CTTAAGTCACCCAAAGAATTAAGAGAACTTGGCGTTTTACTAGCATTCCTTAAACAGCCGCAACCACCCGCATCTTTTAA
AGAAACATTGTCAATGTTACCGCTTGCTAAGCGTATATTTGCTATGTCTCCTAAAACCGTATCAAAAGCAGCTTGTCATG
AAATCGTCATTGACAAACCGAATATTAATATATTGCCGATCCAAAGATGTTGGCCGGATGATATTTCGCCTTTAATTACT
TGGGGTATAGTATTTACTAAAGGTCCAACAAAAGATAAAATCGATAATTACAACCTTGGCATATATAGAATGCAGGTTAT
TTCAGAAAATAAGCTATTGATGCGTTGGTTAAAGTTACGGGGGGGAGCAGAGCATCATAAACGTTGGAAAGAAGCAAAAA
AAGAATCTTTTCCTACTGCTATCGTTATCGGGGCAAATCCAGCGGTAACTTTGGCAGCAGTTATGCCGATACCTGAGAAT
ATCTCGGAGTATAATTTTGCTGGTTTACTCGGTAATAAAAAAGTAGAGTTGGTACAATGCAAAACTATTGACCTCAAAGT
ACCTGCACATAGTGAAATAGTTCTGGAAGGCTATGTAAGTTTAGAGGAGTATTTGCCTGAAGGTCCTTTTGGGGATCACA
CCGGATATTATAATGATGTTGAGGAATTTCCTGTATTTACGGTTACCGCAATAACGATGAAGAAAAATCCAGTATATTTA
AGCACCTATACAGGAGAACCGCCTGATGAGCCATCAATCTTAGGTGAAGCATTAAATGAAATTTTTATTCCTATATTACA
GCAACAATTTCCGGAAATAGTCGATTTTTGGCTTCCACCTGAAGGTTGTTCATATAGAGTTGCGGTAGTATCGATTAAAA
AATCCTATCCCGGTCATGCTAAAAGAATAATGCTTGGGATTTGGTCTTACTTACGGCACTTTATGTATAGTAAGTTTATT
ATAGTTGTAGATGACGATATTGATGTTCGTAATTGGCAAGAAGTAATTTGGGCAATAGCAACAAGAAGCGACCCAAGGCG
TGATACGAGCTTTATAGATAATTCCCCGATAGATTATTTGGATTTTGCATCTCCTGAGTCAGGCCTTGGTAGTAAAATGG
GAATAGATGCAACCGATAAAATATACCCTGAGACAAATAGAAAATGGGGTAAGAAAATAGAAATGAGTCAGGAAGTTATC
GACAAGGTTAATAGTATGTGGAATAGTTTAAAGATATAA

Upstream 100 bases:

>100_bases
TGAAGAAGCAATCTCAGGATATTTAATGAGATTGCCACGCAGCCTATGGCTGCTCGCAATGACGATAAAATAAGCCGCAC
ATTATAAACAAAAAAAAACT

Downstream 100 bases:

>100_bases
GGTATACTCGTTTAATTTGAAAAATTGGCGTCGTTGTGTCATATTTTTTGATCCTCACGTAGGGCTAATGATTTAATTTG
GACGTTTTTTGTCAATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MSFKDLPEFLKFLEKNGELKRIALEVKTDLEITEISRRVLAQGGPALLFENVIKVDGIKSDIPVLTNLYASINRICMGLK
LKSPKELRELGVLLAFLKQPQPPASFKETLSMLPLAKRIFAMSPKTVSKAACHEIVIDKPNINILPIQRCWPDDISPLIT
WGIVFTKGPTKDKIDNYNLGIYRMQVISENKLLMRWLKLRGGAEHHKRWKEAKKESFPTAIVIGANPAVTLAAVMPIPEN
ISEYNFAGLLGNKKVELVQCKTIDLKVPAHSEIVLEGYVSLEEYLPEGPFGDHTGYYNDVEEFPVFTVTAITMKKNPVYL
STYTGEPPDEPSILGEALNEIFIPILQQQFPEIVDFWLPPEGCSYRVAVVSIKKSYPGHAKRIMLGIWSYLRHFMYSKFI
IVVDDDIDVRNWQEVIWAIATRSDPRRDTSFIDNSPIDYLDFASPESGLGSKMGIDATDKIYPETNRKWGKKIEMSQEVI
DKVNSMWNSLKI

Sequences:

>Translated_492_residues
MSFKDLPEFLKFLEKNGELKRIALEVKTDLEITEISRRVLAQGGPALLFENVIKVDGIKSDIPVLTNLYASINRICMGLK
LKSPKELRELGVLLAFLKQPQPPASFKETLSMLPLAKRIFAMSPKTVSKAACHEIVIDKPNINILPIQRCWPDDISPLIT
WGIVFTKGPTKDKIDNYNLGIYRMQVISENKLLMRWLKLRGGAEHHKRWKEAKKESFPTAIVIGANPAVTLAAVMPIPEN
ISEYNFAGLLGNKKVELVQCKTIDLKVPAHSEIVLEGYVSLEEYLPEGPFGDHTGYYNDVEEFPVFTVTAITMKKNPVYL
STYTGEPPDEPSILGEALNEIFIPILQQQFPEIVDFWLPPEGCSYRVAVVSIKKSYPGHAKRIMLGIWSYLRHFMYSKFI
IVVDDDIDVRNWQEVIWAIATRSDPRRDTSFIDNSPIDYLDFASPESGLGSKMGIDATDKIYPETNRKWGKKIEMSQEVI
DKVNSMWNSLKI
>Mature_491_residues
SFKDLPEFLKFLEKNGELKRIALEVKTDLEITEISRRVLAQGGPALLFENVIKVDGIKSDIPVLTNLYASINRICMGLKL
KSPKELRELGVLLAFLKQPQPPASFKETLSMLPLAKRIFAMSPKTVSKAACHEIVIDKPNINILPIQRCWPDDISPLITW
GIVFTKGPTKDKIDNYNLGIYRMQVISENKLLMRWLKLRGGAEHHKRWKEAKKESFPTAIVIGANPAVTLAAVMPIPENI
SEYNFAGLLGNKKVELVQCKTIDLKVPAHSEIVLEGYVSLEEYLPEGPFGDHTGYYNDVEEFPVFTVTAITMKKNPVYLS
TYTGEPPDEPSILGEALNEIFIPILQQQFPEIVDFWLPPEGCSYRVAVVSIKKSYPGHAKRIMLGIWSYLRHFMYSKFII
VVDDDIDVRNWQEVIWAIATRSDPRRDTSFIDNSPIDYLDFASPESGLGSKMGIDATDKIYPETNRKWGKKIEMSQEVID
KVNSMWNSLKI

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=495, Percent_Identity=55.1515151515151, Blast_Score=581, Evalue=1e-167,
Organism=Saccharomyces cerevisiae, GI6320748, Length=511, Percent_Identity=27.3972602739726, Blast_Score=128, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 55791; Mature: 55659

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKDLPEFLKFLEKNGELKRIALEVKTDLEITEISRRVLAQGGPALLFENVIKVDGIKS
CCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
DIPVLTNLYASINRICMGLKLKSPKELRELGVLLAFLKQPQPPASFKETLSMLPLAKRIF
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AMSPKTVSKAACHEIVIDKPNINILPIQRCWPDDISPLITWGIVFTKGPTKDKIDNYNLG
HCCCCHHHHHHHHHEEEECCCCCEEECCCCCCCCCHHHEEEEEEEECCCCCCCCCCCCCC
IYRMQVISENKLLMRWLKLRGGAEHHKRWKEAKKESFPTAIVIGANPAVTLAAVMPIPEN
EEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCC
ISEYNFAGLLGNKKVELVQCKTIDLKVPAHSEIVLEGYVSLEEYLPEGPFGDHTGYYNDV
CCCCCEEEECCCCCEEEEEEEEEEEECCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCH
EEFPVFTVTAITMKKNPVYLSTYTGEPPDEPSILGEALNEIFIPILQQQFPEIVDFWLPP
HHCCEEEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGCSYRVAVVSIKKSYPGHAKRIMLGIWSYLRHFMYSKFIIVVDDDIDVRNWQEVIWAIA
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHH
TRSDPRRDTSFIDNSPIDYLDFASPESGLGSKMGIDATDKIYPETNRKWGKKIEMSQEVI
CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHH
DKVNSMWNSLKI
HHHHHHHHHCCC
>Mature Secondary Structure 
SFKDLPEFLKFLEKNGELKRIALEVKTDLEITEISRRVLAQGGPALLFENVIKVDGIKS
CHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
DIPVLTNLYASINRICMGLKLKSPKELRELGVLLAFLKQPQPPASFKETLSMLPLAKRIF
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AMSPKTVSKAACHEIVIDKPNINILPIQRCWPDDISPLITWGIVFTKGPTKDKIDNYNLG
HCCCCHHHHHHHHHEEEECCCCCEEECCCCCCCCCHHHEEEEEEEECCCCCCCCCCCCCC
IYRMQVISENKLLMRWLKLRGGAEHHKRWKEAKKESFPTAIVIGANPAVTLAAVMPIPEN
EEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCC
ISEYNFAGLLGNKKVELVQCKTIDLKVPAHSEIVLEGYVSLEEYLPEGPFGDHTGYYNDV
CCCCCEEEECCCCCEEEEEEEEEEEECCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCH
EEFPVFTVTAITMKKNPVYLSTYTGEPPDEPSILGEALNEIFIPILQQQFPEIVDFWLPP
HHCCEEEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGCSYRVAVVSIKKSYPGHAKRIMLGIWSYLRHFMYSKFIIVVDDDIDVRNWQEVIWAIA
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHH
TRSDPRRDTSFIDNSPIDYLDFASPESGLGSKMGIDATDKIYPETNRKWGKKIEMSQEVI
CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHH
DKVNSMWNSLKI
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]