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The map label for this gene is 15893030

Identifier: 15893030

GI number: 15893030

Start: 1029396

End: 1029695

Strand: Reverse

Name: 15893030

Synonym: RC1107

Alternate gene names: NA

Gene position: 1029695-1029396 (Counterclockwise)

Preceding gene: 15893031

Following gene: 15893029

Centisome position: 81.16

GC content: 31.0

Gene sequence:

>300_bases
ATGTCGTGGATAGATAAGTGTTTTATTACTTTTTTTCACAAAAAAGTAGGAGAAGATGAGTTTTTGAATCAATATTATGA
AAGCCGTAATATTGATTATTTGGGGCGTCCAAGGAGGTTTGTTATTTATAAAAATGTAAATGAACCTACAAAAATTCCGC
CAAGTTGGCACGCTTGGTTACATCATTTAGTAAATGAGAGACCAAAAAGTATTCAGCTTTTTCCATGGCAAAAGAATAAT
AAAATGGTTAAAAAGCTGCCTAAAACATCAAATCTTAAATATAATAGATGGCAACCGTAA

Upstream 100 bases:

>100_bases
TTATTTGGAAATGGGTAAAAGGTCATGCAAATAATAGCGGTAATATTGCTGCCGATAAACTTGCAGTGCAAGGAAGAGAA
ACTGCTATAGAAATTTTAAA

Downstream 100 bases:

>100_bases
TTAATTAATAAAATATAAAAAACAATGCAACAGAACATTATTGAAACAATTATAGGCTTTGTAGTATTAATTATTGCTTT
GCTATTTTTGATTTTTGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MSWIDKCFITFFHKKVGEDEFLNQYYESRNIDYLGRPRRFVIYKNVNEPTKIPPSWHAWLHHLVNERPKSIQLFPWQKNN
KMVKKLPKTSNLKYNRWQP

Sequences:

>Translated_99_residues
MSWIDKCFITFFHKKVGEDEFLNQYYESRNIDYLGRPRRFVIYKNVNEPTKIPPSWHAWLHHLVNERPKSIQLFPWQKNN
KMVKKLPKTSNLKYNRWQP
>Mature_98_residues
SWIDKCFITFFHKKVGEDEFLNQYYESRNIDYLGRPRRFVIYKNVNEPTKIPPSWHAWLHHLVNERPKSIQLFPWQKNNK
MVKKLPKTSNLKYNRWQP

Specific function: Unknown

COG id: COG3761

COG function: function code C; NADH:ubiquinone oxidoreductase 17.2 kD subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007763 [H]

Pfam domain/function: PF05071 NDUFA12 [H]

EC number: NA

Molecular weight: Translated: 12235; Mature: 12104

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWIDKCFITFFHKKVGEDEFLNQYYESRNIDYLGRPRRFVIYKNVNEPTKIPPSWHAWL
CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHH
HHLVNERPKSIQLFPWQKNNKMVKKLPKTSNLKYNRWQP
HHHHCCCCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SWIDKCFITFFHKKVGEDEFLNQYYESRNIDYLGRPRRFVIYKNVNEPTKIPPSWHAWL
CHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHH
HHLVNERPKSIQLFPWQKNNKMVKKLPKTSNLKYNRWQP
HHHHCCCCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]