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The map label for this gene is yhiR [C]

Identifier: 15893017

GI number: 15893017

Start: 1019652

End: 1020005

Strand: Reverse

Name: yhiR [C]

Synonym: RC1094

Alternate gene names: 15893017

Gene position: 1020005-1019652 (Counterclockwise)

Preceding gene: 15893018

Following gene: 15893016

Centisome position: 80.39

GC content: 25.71

Gene sequence:

>354_bases
TTGCTACCATTTAAAGAGAATAGAGGATTAATTTTTCTTGATCCGCCTTTTGAAGTAAAAAATGAGTTTCAAAAATTACT
TGAAGCACTTAAAAAAATTAAGCTACGAGTTCTTAATAATACTGTCTTAATTTGGTATCCTATAAAAGATTTATCTTTAG
TCCGTGATTTTTACCATAATTACAAAAATATCGGATTTAAAGAAACTATGATTATTGAATATGAGCTTTTAAATAGTGAT
AAAAATATGGTAAAGTGTGGGTTAATGTTAATTAACCCTCCAAATATTAGAGGAGAATTAGAGAAATTAACAGAATATTT
AAGTGGCACGAAATTTACATACATTTATCTTTAA

Upstream 100 bases:

>100_bases
CTTAATTGCCTGCGAACTTCATCCAAGCGATTATTTAAGTTTAAAAAAATTATTACCAAATGATACGCATAATATAGATG
CTTATAATGCTATCAAAGCT

Downstream 100 bases:

>100_bases
TGTCTTTTAAAAAATATATCTTTTTACTGTTTATAGTTTTTCTTGTTCAAGGTTGTAGCAGTATTAAAAAATCTAGTGAT
ACTACGTTACTTGCTACTAC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFJ [H]

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MLPFKENRGLIFLDPPFEVKNEFQKLLEALKKIKLRVLNNTVLIWYPIKDLSLVRDFYHNYKNIGFKETMIIEYELLNSD
KNMVKCGLMLINPPNIRGELEKLTEYLSGTKFTYIYL

Sequences:

>Translated_117_residues
MLPFKENRGLIFLDPPFEVKNEFQKLLEALKKIKLRVLNNTVLIWYPIKDLSLVRDFYHNYKNIGFKETMIIEYELLNSD
KNMVKCGLMLINPPNIRGELEKLTEYLSGTKFTYIYL
>Mature_117_residues
MLPFKENRGLIFLDPPFEVKNEFQKLLEALKKIKLRVLNNTVLIWYPIKDLSLVRDFYHNYKNIGFKETMIIEYELLNSD
KNMVKCGLMLINPPNIRGELEKLTEYLSGTKFTYIYL

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhiR [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 13937; Mature: 13937

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPFKENRGLIFLDPPFEVKNEFQKLLEALKKIKLRVLNNTVLIWYPIKDLSLVRDFYHN
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCHHHHHHHHHHH
YKNIGFKETMIIEYELLNSDKNMVKCGLMLINPPNIRGELEKLTEYLSGTKFTYIYL
HHCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEC
>Mature Secondary Structure
MLPFKENRGLIFLDPPFEVKNEFQKLLEALKKIKLRVLNNTVLIWYPIKDLSLVRDFYHN
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEECCEEEEEECCCHHHHHHHHHHH
YKNIGFKETMIIEYELLNSDKNMVKCGLMLINPPNIRGELEKLTEYLSGTKFTYIYL
HHCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800; 10675023 [H]