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The map label for this gene is 15892954

Identifier: 15892954

GI number: 15892954

Start: 957697

End: 958839

Strand: Reverse

Name: 15892954

Synonym: RC1031

Alternate gene names: NA

Gene position: 958839-957697 (Counterclockwise)

Preceding gene: 15892955

Following gene: 15892947

Centisome position: 75.57

GC content: 33.42

Gene sequence:

>1143_bases
ATGATAGACAGAAATTATTATTTAACACATATCACAGGTGCCCTTGAGATATTCCCTATTTGTGCCATGCTCGGTCCAAG
GCAATGTGGTAAAACTACTTTAGCTCACGCTTATATTAAACAGCTTAAAGAAGATGAAAAGAGCTACTTTTTTGACCTTG
AGGATCCAGCTCACTTAGATCAATTTAAGAATCTTAAAACAACTCTTGAGCCTTTAAACGGTTTAATAGTAATTGATGAA
ATTCAAAGACAACCTGAAATTTTTCCTTATTTAAGAGTTCTTGCTGACTATTCAAACAAAAAATTTTTAATATTAGGTAG
TGCTTCTGGAGAATTATTGCGACAATCTTCAGAATCATTAGCCGGCCGTATTGAATATATGGAGCTTACTCCGTTCAATT
TAATAGAGATAAATGATTTTAGGGAGTTATGGTTAAGAGGTGGTTTTCCTAAATCATATTTAGCAAAAAATTATGTCCAA
AGTCTTAGATGGCGTAATAGCTACATCACTAGTTTTATAGAGTGTGATTTGCCTAGTTTAGGAATATCTCTTAATGCACA
TGTAATGAGGCAGTTATGGATGATGCTTGCTCATAATCATGGGCAATTATTAAATTATAGCGAGCTTGGAAGGTCGCTCG
GTTTAACGGATATGACTATAAAACGTTATACTGAAATATTAGAGCAAACTTTTATGATTCGGCTATTAAAACCTTGGTAT
GAAAATATCTCAAAACGTCAAGTGAAAGCACCAAAAGTCTATATACGAGATAGCGGAATACTACATGCATTATTAGGGAT
TCACGAACATGATTGGTATGTTCATCCAAAACGCGGTCTTTCATTTGAAGGGTTTGTAATAGAGGAGTTAATACGTAAAT
TTAAAACGGATGCAGAGTATTTTTTTTGGCGAACGCAAACAGGAGCAGAATTAGATTTATTGATTATTAAGAATGGTAAG
AAATACGGCTTTGAAGTAAAAAATGCTGATGCTCCTAGTATTACTAAATCAATGCATACCGTTCTTGCCGATTTGCAGTT
AGAACATTTATATATTGTTACCGCCGGGAATAATACATATAAAAAAACAGAAAAAATAAGTGTAGTTGGAATAGCGAACT
TATCTAATTTACAGCTTGGTTAA

Upstream 100 bases:

>100_bases
TATAATCATTAATCAAAAGTGCACAGGACCTAGAAACATCTTGCTATTATTTGATTAAAATTATATTGTAAATTCAAAGT
GTCATTATGAAATTACAAGG

Downstream 100 bases:

>100_bases
AGTATATAAGTTACCATATTTCATTACCTTTAGTCTTATCATTACTTAATAAATTCATGATGACAATTAGAATCAGTAAT
ATTATCTAGTAATATATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MIDRNYYLTHITGALEIFPICAMLGPRQCGKTTLAHAYIKQLKEDEKSYFFDLEDPAHLDQFKNLKTTLEPLNGLIVIDE
IQRQPEIFPYLRVLADYSNKKFLILGSASGELLRQSSESLAGRIEYMELTPFNLIEINDFRELWLRGGFPKSYLAKNYVQ
SLRWRNSYITSFIECDLPSLGISLNAHVMRQLWMMLAHNHGQLLNYSELGRSLGLTDMTIKRYTEILEQTFMIRLLKPWY
ENISKRQVKAPKVYIRDSGILHALLGIHEHDWYVHPKRGLSFEGFVIEELIRKFKTDAEYFFWRTQTGAELDLLIIKNGK
KYGFEVKNADAPSITKSMHTVLADLQLEHLYIVTAGNNTYKKTEKISVVGIANLSNLQLG

Sequences:

>Translated_380_residues
MIDRNYYLTHITGALEIFPICAMLGPRQCGKTTLAHAYIKQLKEDEKSYFFDLEDPAHLDQFKNLKTTLEPLNGLIVIDE
IQRQPEIFPYLRVLADYSNKKFLILGSASGELLRQSSESLAGRIEYMELTPFNLIEINDFRELWLRGGFPKSYLAKNYVQ
SLRWRNSYITSFIECDLPSLGISLNAHVMRQLWMMLAHNHGQLLNYSELGRSLGLTDMTIKRYTEILEQTFMIRLLKPWY
ENISKRQVKAPKVYIRDSGILHALLGIHEHDWYVHPKRGLSFEGFVIEELIRKFKTDAEYFFWRTQTGAELDLLIIKNGK
KYGFEVKNADAPSITKSMHTVLADLQLEHLYIVTAGNNTYKKTEKISVVGIANLSNLQLG
>Mature_380_residues
MIDRNYYLTHITGALEIFPICAMLGPRQCGKTTLAHAYIKQLKEDEKSYFFDLEDPAHLDQFKNLKTTLEPLNGLIVIDE
IQRQPEIFPYLRVLADYSNKKFLILGSASGELLRQSSESLAGRIEYMELTPFNLIEINDFRELWLRGGFPKSYLAKNYVQ
SLRWRNSYITSFIECDLPSLGISLNAHVMRQLWMMLAHNHGQLLNYSELGRSLGLTDMTIKRYTEILEQTFMIRLLKPWY
ENISKRQVKAPKVYIRDSGILHALLGIHEHDWYVHPKRGLSFEGFVIEELIRKFKTDAEYFFWRTQTGAELDLLIIKNGK
KYGFEVKNADAPSITKSMHTVLADLQLEHLYIVTAGNNTYKKTEKISVVGIANLSNLQLG

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 43964; Mature: 43964

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRNYYLTHITGALEIFPICAMLGPRQCGKTTLAHAYIKQLKEDEKSYFFDLEDPAHLD
CCCCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHEEEECCCCHHHH
QFKNLKTTLEPLNGLIVIDEIQRQPEIFPYLRVLADYSNKKFLILGSASGELLRQSSESL
HHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH
AGRIEYMELTPFNLIEINDFRELWLRGGFPKSYLAKNYVQSLRWRNSYITSFIECDLPSL
HCEEEEEEECCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GISLNAHVMRQLWMMLAHNHGQLLNYSELGRSLGLTDMTIKRYTEILEQTFMIRLLKPWY
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ENISKRQVKAPKVYIRDSGILHALLGIHEHDWYVHPKRGLSFEGFVIEELIRKFKTDAEY
HHHHHCCCCCCEEEEECCCHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCEE
FFWRTQTGAELDLLIIKNGKKYGFEVKNADAPSITKSMHTVLADLQLEHLYIVTAGNNTY
EEEEECCCCEEEEEEEECCCEECCEECCCCCCHHHHHHHHHHHHCEEEEEEEEECCCCCC
KKTEKISVVGIANLSNLQLG
CCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MIDRNYYLTHITGALEIFPICAMLGPRQCGKTTLAHAYIKQLKEDEKSYFFDLEDPAHLD
CCCCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHEEEECCCCHHHH
QFKNLKTTLEPLNGLIVIDEIQRQPEIFPYLRVLADYSNKKFLILGSASGELLRQSSESL
HHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH
AGRIEYMELTPFNLIEINDFRELWLRGGFPKSYLAKNYVQSLRWRNSYITSFIECDLPSL
HCEEEEEEECCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GISLNAHVMRQLWMMLAHNHGQLLNYSELGRSLGLTDMTIKRYTEILEQTFMIRLLKPWY
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ENISKRQVKAPKVYIRDSGILHALLGIHEHDWYVHPKRGLSFEGFVIEELIRKFKTDAEY
HHHHHCCCCCCEEEEECCCHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCEE
FFWRTQTGAELDLLIIKNGKKYGFEVKNADAPSITKSMHTVLADLQLEHLYIVTAGNNTY
EEEEECCCCEEEEEEEECCCEECCEECCCCCCHHHHHHHHHHHHCEEEEEEEEECCCCCC
KKTEKISVVGIANLSNLQLG
CCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]