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The map label for this gene is 15892760

Identifier: 15892760

GI number: 15892760

Start: 792171

End: 792332

Strand: Reverse

Name: 15892760

Synonym: RC0837

Alternate gene names: NA

Gene position: 792332-792171 (Counterclockwise)

Preceding gene: 15892761

Following gene: 15892759

Centisome position: 62.45

GC content: 43.83

Gene sequence:

>162_bases
ATGTTATTAGCTTGTGGTCTTGGTGTGGCACTTGGAGGTGGATATGAGCTGTTATTGCACTCAAGCTTTATTATAGGAAA
TCAAGAACTTAACGCAGGGCTTGTAGAACTTGGTGTGGGTTTAATATCCGGGTGGGGCGGTGTTACCGAAATGTTTGCTT
GA

Upstream 100 bases:

>100_bases
CTTCTTCTGTCTTATATTGAAGATAAGAATTTTCACGATCTAGAGAATTTACTAAAGCTGGGACAGCAAACCATGCTCCA
CTTAAAATATTCCTCTGTAC

Downstream 100 bases:

>100_bases
AGTAATGGTAATAAAACTAAACTAATTAGAAATATCAGCAATATTATAGAGCAGAATAAAACAAGTGCAGCCGGATTACT
TTACAGCAGATTATGATGTA

Product: putative 3-hydroxyacyl-CoA dehydrogenase (FadB)

Products: 3-oxoacyl-CoA; NADH; H+

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MLLACGLGVALGGGYELLLHSSFIIGNQELNAGLVELGVGLISGWGGVTEMFA

Sequences:

>Translated_53_residues
MLLACGLGVALGGGYELLLHSSFIIGNQELNAGLVELGVGLISGWGGVTEMFA
>Mature_53_residues
MLLACGLGVALGGGYELLLHSSFIIGNQELNAGLVELGVGLISGWGGVTEMFA

Specific function: Unknown

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y837_RICCN (Q92HD4)

Other databases:

- EMBL:   AE006914
- PIR:   E97804
- RefSeq:   NP_360474.1
- ProteinModelPortal:   Q92HD4
- SMR:   Q92HD4
- GeneID:   927800
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0837
- NMPDR:   fig|272944.1.peg.837
- BioCyc:   RCON272944:RC0837-MONOMER
- InterPro:   IPR001753

Pfam domain/function: PF00378 ECH

EC number: 1.1.1.35; 4.2.1.17

Molecular weight: Translated: 5349; Mature: 5349

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLACGLGVALGGGYELLLHSSFIIGNQELNAGLVELGVGLISGWGGVTEMFA
CEEECCCCEEECCCEEEEEECEEEECCCCCCCCHHHHHHHHHCCCCCCHHHCC
>Mature Secondary Structure
MLLACGLGVALGGGYELLLHSSFIIGNQELNAGLVELGVGLISGWGGVTEMFA
CEEECCCCEEECCCEEEEEECEEEECCCCCCCCHHHHHHHHHCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (S)-3-hydroxyacyl-CoA; NAD+

Specific reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893