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The map label for this gene is 15892761

Identifier: 15892761

GI number: 15892761

Start: 792286

End: 792582

Strand: Reverse

Name: 15892761

Synonym: RC0838

Alternate gene names: NA

Gene position: 792582-792286 (Counterclockwise)

Preceding gene: 15892762

Following gene: 15892760

Centisome position: 62.47

GC content: 33.0

Gene sequence:

>297_bases
TTGATTTTTGTTATTACTATAAAAATGAATTGTTTAAATCATGAGGTGTTTTATTTACTACAAGAAGCAGCAAGTAAAGC
CGAAAATGACGGTAAAAATCTTTATATTTATCCGCAAGGAAATAATTTTTCTGCCGGTGCTGATTTAAAACTTCTTCTGT
CTTATATTGAAGATAAGAATTTTCACGATCTAGAGAATTTACTAAAGCTGGGACAGCAAACCATGCTCCACTTAAAATAT
TCCTCTGTACATGTTATTAGCTTGTGGTCTTGGTGTGGCACTTGGAGGTGGATATGA

Upstream 100 bases:

>100_bases
ATCGATAAACAAAAATTTAATTCTCACAAAGATATTTTACAAGAAAGTCAGATTAGTATTAGAGAATAGCTCGGCAAAAT
TAATACTTTATCAAGATGTT

Downstream 100 bases:

>100_bases
GCTGTTATTGCACTCAAGCTTTATTATAGGAAATCAAGAACTTAACGCAGGGCTTGTAGAACTTGGTGTGGGTTTAATAT
CCGGGTGGGGCGGTGTTACC

Product: putative 3-hydroxyacyl-CoA dehydrogenase (FadB)

Products: 3-oxoacyl-CoA; NADH; H+

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MIFVITIKMNCLNHEVFYLLQEAASKAENDGKNLYIYPQGNNFSAGADLKLLLSYIEDKNFHDLENLLKLGQQTMLHLKY
SSVHVISLWSWCGTWRWI

Sequences:

>Translated_98_residues
MIFVITIKMNCLNHEVFYLLQEAASKAENDGKNLYIYPQGNNFSAGADLKLLLSYIEDKNFHDLENLLKLGQQTMLHLKY
SSVHVISLWSWCGTWRWI
>Mature_98_residues
MIFVITIKMNCLNHEVFYLLQEAASKAENDGKNLYIYPQGNNFSAGADLKLLLSYIEDKNFHDLENLLKLGQQTMLHLKY
SSVHVISLWSWCGTWRWI

Specific function: Unknown

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y838_RICCN (Q92HD3)

Other databases:

- EMBL:   AE006914
- PIR:   F97804
- RefSeq:   NP_360475.1
- ProteinModelPortal:   Q92HD3
- GeneID:   927801
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0838
- NMPDR:   fig|272944.1.peg.838
- BioCyc:   RCON272944:RC0838-MONOMER

Pfam domain/function: NA

EC number: 1.1.1.35; 4.2.1.17

Molecular weight: Translated: 11437; Mature: 11437

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFVITIKMNCLNHEVFYLLQEAASKAENDGKNLYIYPQGNNFSAGADLKLLLSYIEDKN
CEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCC
FHDLENLLKLGQQTMLHLKYSSVHVISLWSWCGTWRWI
CHHHHHHHHHCHHHEEEEECCCEEEEEEEHHHCCCCCC
>Mature Secondary Structure
MIFVITIKMNCLNHEVFYLLQEAASKAENDGKNLYIYPQGNNFSAGADLKLLLSYIEDKN
CEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCC
FHDLENLLKLGQQTMLHLKYSSVHVISLWSWCGTWRWI
CHHHHHHHHHCHHHEEEEECCCEEEEEEEHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (S)-3-hydroxyacyl-CoA; NAD+

Specific reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893