Click here to switch to the map view.

The map label for this gene is yisU [H]

Identifier: 15892640

GI number: 15892640

Start: 688449

End: 689090

Strand: Reverse

Name: yisU [H]

Synonym: RC0717

Alternate gene names: 15892640

Gene position: 689090-688449 (Counterclockwise)

Preceding gene: 15892641

Following gene: 15892639

Centisome position: 54.31

GC content: 29.6

Gene sequence:

>642_bases
ATGAATAATGATATATTAAGTGCTTTTTTACATGGCATCGTTTTAGCTCTCGGTTTAATAGTGCCGCTCGGAGTACAGAA
TATTTTTATATTCAATCAAGGAGCAACACAGCCAAAGTTTAGCAAGGCTTTACCTAGCATAATTGCAGCCTCAATATGTG
ATACTATGCTTATATGTATGGCAGTTCTTGGGATATCTTTGTTAATTCTTGAAATTTCTTGGTTAAAATTATCTATATTT
ATTGTTGGATTTATTTTCTTAATTTATATGGGATATAATACTTGGAATCAGCCGCCTATTGATCTTACAATGAATTCCGG
GGCTTTTTCAGCTCAAAAACAAATTTTATTTGCTATATCGGTGTCAATATTAAATCCGCATGCAATTATGGATACGATTA
TAGTAATAGGTATTAGTGCTTTAAAGTATAGCGGTATTGCAAAAATTATATTTACCTTAACTTGCATACTTATATCTTGG
ATATGGTTTTTTTCTTTAGCAGTTGCAGGTTATAATATTAGAAAGCTAAATAAAAGTAGTACGATTTTAACTATAATTAA
TAAAATAGCTGCTATTATTATTTGGGCAGTTGCTTTTTATATTGGAGTACAAATATTGTATGAAATCGGTTTTATTAACT
AG

Upstream 100 bases:

>100_bases
TAGAAAATTAAATAAAAATGCTATAATATTAAAAATAATTAATAAAATGGGAGCAGTAACAATTTGGAGCATAGCTCTAG
TATATAAAATGGCTATTTAA

Downstream 100 bases:

>100_bases
ACATATTGAAGAAAATAATGAAACTATAAAGGAAATAAGTAAATATAATTTAGATTTACGTGATATTCATTGTCCTTTAA
TTAAATATAAAACTTTAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNNDILSAFLHGIVLALGLIVPLGVQNIFIFNQGATQPKFSKALPSIIAASICDTMLICMAVLGISLLILEISWLKLSIF
IVGFIFLIYMGYNTWNQPPIDLTMNSGAFSAQKQILFAISVSILNPHAIMDTIIVIGISALKYSGIAKIIFTLTCILISW
IWFFSLAVAGYNIRKLNKSSTILTIINKIAAIIIWAVAFYIGVQILYEIGFIN

Sequences:

>Translated_213_residues
MNNDILSAFLHGIVLALGLIVPLGVQNIFIFNQGATQPKFSKALPSIIAASICDTMLICMAVLGISLLILEISWLKLSIF
IVGFIFLIYMGYNTWNQPPIDLTMNSGAFSAQKQILFAISVSILNPHAIMDTIIVIGISALKYSGIAKIIFTLTCILISW
IWFFSLAVAGYNIRKLNKSSTILTIINKIAAIIIWAVAFYIGVQILYEIGFIN
>Mature_213_residues
MNNDILSAFLHGIVLALGLIVPLGVQNIFIFNQGATQPKFSKALPSIIAASICDTMLICMAVLGISLLILEISWLKLSIF
IVGFIFLIYMGYNTWNQPPIDLTMNSGAFSAQKQILFAISVSILNPHAIMDTIIVIGISALKYSGIAKIIFTLTCILISW
IWFFSLAVAGYNIRKLNKSSTILTIINKIAAIIIWAVAFYIGVQILYEIGFIN

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=201, Percent_Identity=28.3582089552239, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 23406; Mature: 23406

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDILSAFLHGIVLALGLIVPLGVQNIFIFNQGATQPKFSKALPSIIAASICDTMLICM
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AVLGISLLILEISWLKLSIFIVGFIFLIYMGYNTWNQPPIDLTMNSGAFSAQKQILFAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
VSILNPHAIMDTIIVIGISALKYSGIAKIIFTLTCILISWIWFFSLAVAGYNIRKLNKSS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCH
TILTIINKIAAIIIWAVAFYIGVQILYEIGFIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNNDILSAFLHGIVLALGLIVPLGVQNIFIFNQGATQPKFSKALPSIIAASICDTMLICM
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AVLGISLLILEISWLKLSIFIVGFIFLIYMGYNTWNQPPIDLTMNSGAFSAQKQILFAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
VSILNPHAIMDTIIVIGISALKYSGIAKIIFTLTCILISWIWFFSLAVAGYNIRKLNKSS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCH
TILTIINKIAAIIIWAVAFYIGVQILYEIGFIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]