Click here to switch to the map view.

The map label for this gene is 15892639

Identifier: 15892639

GI number: 15892639

Start: 687797

End: 688501

Strand: Reverse

Name: 15892639

Synonym: RC0716

Alternate gene names: NA

Gene position: 688501-687797 (Counterclockwise)

Preceding gene: 15892640

Following gene: 15892638

Centisome position: 54.27

GC content: 24.54

Gene sequence:

>705_bases
TTGCTTTTTATATTGGAGTACAAATATTGTATGAAATCGGTTTTATTAACTAGACATATTGAAGAAAATAATGAAACTAT
AAAGGAAATAAGTAAATATAATTTAGATTTACGTGATATTCATTGTCCTTTAATTAAATATAAAACTTTAGATTTTAATA
TCGATATTTTAGATAATTACTCAAATATAATAATAACTAGTAAATATGCAGCAAGTATCTTAACCGGTCATAACTTAAAA
CAAGATATTTGGGTAGTAGGTAGTAAGTCAAAACGATTATTAGGAAAGAAAGTAATGTATACTGCTAAAAACGTGGAAGA
TTTGATTAAGCATTTTCCTCCTGATTTATATGAGCAAACTATATATTTATCTTCAAATGAAATTACTCAAGATTTACCTA
GCAAAATAGCTAGACATATCATTTATAATGTAGAATATTTGAATGAGCTGCCCGTATCTATTATAAAAGAATTTAACAAT
AATATTGATTTTATATTACTTTATTCTCAAAATAGTGCTAGGACTTTAGTAAAATTATTACTGCAAAATAATTTACTAGA
GTACTTACAAGATAGTTTAGTTGTAGCCATAAGTTTGAAAGTTGCAAATATAGTTAGACCTTTTATAAAAAATGTGGTTT
ATTGTGATGATCAAAACCTTAACGATATAATCAAGTTATTATCTGAAAATGCACAAATTCGATAG

Upstream 100 bases:

>100_bases
TTTTCTTTAGCAGTTGCAGGTTATAATATTAGAAAGCTAAATAAAAGTAGTACGATTTTAACTATAATTAATAAAATAGC
TGCTATTATTATTTGGGCAG

Downstream 100 bases:

>100_bases
TTTATTTAAAAGCAAAAACATCTTTTTTATAGCAATAGTAATATTTGTCTTATCTTCTTTTACTCTTTATCATAATAGAT
CCGATATTTTAAAACTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MLFILEYKYCMKSVLLTRHIEENNETIKEISKYNLDLRDIHCPLIKYKTLDFNIDILDNYSNIIITSKYAASILTGHNLK
QDIWVVGSKSKRLLGKKVMYTAKNVEDLIKHFPPDLYEQTIYLSSNEITQDLPSKIARHIIYNVEYLNELPVSIIKEFNN
NIDFILLYSQNSARTLVKLLLQNNLLEYLQDSLVVAISLKVANIVRPFIKNVVYCDDQNLNDIIKLLSENAQIR

Sequences:

>Translated_234_residues
MLFILEYKYCMKSVLLTRHIEENNETIKEISKYNLDLRDIHCPLIKYKTLDFNIDILDNYSNIIITSKYAASILTGHNLK
QDIWVVGSKSKRLLGKKVMYTAKNVEDLIKHFPPDLYEQTIYLSSNEITQDLPSKIARHIIYNVEYLNELPVSIIKEFNN
NIDFILLYSQNSARTLVKLLLQNNLLEYLQDSLVVAISLKVANIVRPFIKNVVYCDDQNLNDIIKLLSENAQIR
>Mature_234_residues
MLFILEYKYCMKSVLLTRHIEENNETIKEISKYNLDLRDIHCPLIKYKTLDFNIDILDNYSNIIITSKYAASILTGHNLK
QDIWVVGSKSKRLLGKKVMYTAKNVEDLIKHFPPDLYEQTIYLSSNEITQDLPSKIARHIIYNVEYLNELPVSIIKEFNN
NIDFILLYSQNSARTLVKLLLQNNLLEYLQDSLVVAISLKVANIVRPFIKNVVYCDDQNLNDIIKLLSENAQIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RPE1 insert domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003754
- InterPro:   IPR005728 [H]

Pfam domain/function: PF02602 HEM4 [H]

EC number: NA

Molecular weight: Translated: 27272; Mature: 27272

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFILEYKYCMKSVLLTRHIEENNETIKEISKYNLDLRDIHCPLIKYKTLDFNIDILDNY
CEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCCEEEEEEEEEEEEEECCC
SNIIITSKYAASILTGHNLKQDIWVVGSKSKRLLGKKVMYTAKNVEDLIKHFPPDLYEQT
CCEEEECHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHCE
IYLSSNEITQDLPSKIARHIIYNVEYLNELPVSIIKEFNNNIDFILLYSQNSARTLVKLL
EEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
LQNNLLEYLQDSLVVAISLKVANIVRPFIKNVVYCDDQNLNDIIKLLSENAQIR
HHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLFILEYKYCMKSVLLTRHIEENNETIKEISKYNLDLRDIHCPLIKYKTLDFNIDILDNY
CEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCCEEEEEEEEEEEEEECCC
SNIIITSKYAASILTGHNLKQDIWVVGSKSKRLLGKKVMYTAKNVEDLIKHFPPDLYEQT
CCEEEECHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHCE
IYLSSNEITQDLPSKIARHIIYNVEYLNELPVSIIKEFNNNIDFILLYSQNSARTLVKLL
EEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
LQNNLLEYLQDSLVVAISLKVANIVRPFIKNVVYCDDQNLNDIIKLLSENAQIR
HHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893; 11030655 [H]