| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is yegO [C]
Identifier: 15892487
GI number: 15892487
Start: 557289
End: 557483
Strand: Reverse
Name: yegO [C]
Synonym: RC0564
Alternate gene names: 15892487
Gene position: 557483-557289 (Counterclockwise)
Preceding gene: 15892488
Following gene: 15892479
Centisome position: 43.94
GC content: 40.0
Gene sequence:
>195_bases ATGTATTTCAGACCGATTATGATGACTACCCTAGCTGCCTTAATAAGAACTATGCCTATTGCGCTTGGAGTCGGAGCAAC AAGAACAGAGAGAAGATCACTAGGACCTGCAGTAGTGGGAGGTTTACTCACACATTGCAATTACTTACTCTTTATACATC ACACCGATAATTTGCCTATATTTAGAAACAGCTAA
Upstream 100 bases:
>100_bases AATCGGTATAGTGAAGAAAAACGCTATCATGATTATCGATTTTGCCTTAGAACTTGAGAGAACTGGCAATAAATCTTCGG CATGCAGCAATTTATGAAGC
Downstream 100 bases:
>100_bases GAAATGGTTAAAGCATAGCAATTATAAAGCTGAAATTAGAAACTATCCGGAATTAAATTGGAAATCTTAATGTTGTTGTA TGGCGCGAGAAACTCGTTCG
Product: RND efflux transporter
Products: NA
Alternate protein names: RND Efflux Transporter
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MYFRPIMMTTLAALIRTMPIALGVGATRTERRSLGPAVVGGLLTHCNYLLFIHHTDNLPIFRNS
Sequences:
>Translated_64_residues MYFRPIMMTTLAALIRTMPIALGVGATRTERRSLGPAVVGGLLTHCNYLLFIHHTDNLPIFRNS >Mature_64_residues MYFRPIMMTTLAALIRTMPIALGVGATRTERRSLGPAVVGGLLTHCNYLLFIHHTDNLPIFRNS
Specific function: Could Be A Drug Efflux Pump (By Similarity). [C]
COG id: COG0841
COG function: function code V; Cation/multidrug efflux pump
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7142; Mature: 7142
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFRPIMMTTLAALIRTMPIALGVGATRTERRSLGPAVVGGLLTHCNYLLFIHHTDNLPI CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCEEEEEEECCCCCE FRNS EECC >Mature Secondary Structure MYFRPIMMTTLAALIRTMPIALGVGATRTERRSLGPAVVGGLLTHCNYLLFIHHTDNLPI CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCEEEEEEECCCCCE FRNS EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA