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The map label for this gene is virB8

Identifier: 15892308

GI number: 15892308

Start: 386055

End: 386753

Strand: Reverse

Name: virB8

Synonym: RC0385

Alternate gene names: NA

Gene position: 386753-386055 (Counterclockwise)

Preceding gene: 15892316

Following gene: 15892307

Centisome position: 30.48

GC content: 27.47

Gene sequence:

>699_bases
ATGGACCCATTAACCAACGCAATACAAGAATATATAAAATCCGGCGAATATTTTATTGATGCAAGAAAATGGTATAATTT
TAAGTATATCTTACCGTTAAGTCATAGAAGTCTTCTGCTTTTAATATGCACGATTTTTACCTTATTATTAACCTTAATTT
GTATAAATATCAACATATTGCTACCTATAAACAAAAAAGTAAAGTATTTAATAAAAGATGATGCCGAAAAACAAGCTGCC
GTTACTAATACTAAACATTCAACATTAGTAAAGCCTTATATCTCTATTGCAAATATTATGCTTCAGAATTATGTAAACCA
ACGAGAAGAATACAATTACGATATATTAAAAGAACAATTTACCTTTATCAAAAATGCTTCTACGAGTATTGTTTATATGC
AATTTGCTAATTTTATGAATATTGATAACCCATTATCACCGGTCATAAGATATCAAAAACTATATAGACGCTCAATTAAT
ATATTATCAATTAACAATATAAACAATAACGAGGCAGTTGTTACTTTTGAATCATTGGCAAAAAATAGTACGGATGCAAT
TTTAGAAAATATGGTATGGGAAGCAAGAATCGGATTTATAATGGATTCTATCAGTACAAATACATCACCTGATATGCCGT
TCAATTTTACCGTTACTAGTTACAAGCTAAAATTATTAAGGAATAAAAATCAGAAATAA

Upstream 100 bases:

>100_bases
TTTTATAGCTTAAAATAACATTAAATTAAATCATAATCATATTATAATAATTATGATAGAGTGTTAAAACAGAATAAAAT
TAGATATTAATCTAGTAATT

Downstream 100 bases:

>100_bases
TATGAAGCAACTAATAATATTTTGTACTTTTATAATACTTACATTAGATGTATTTGCTCTTACTATATCACGACCTCTAG
GTCGAGACCCACGTCTAAGA

Product: virB8 protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MDPLTNAIQEYIKSGEYFIDARKWYNFKYILPLSHRSLLLLICTIFTLLLTLICININILLPINKKVKYLIKDDAEKQAA
VTNTKHSTLVKPYISIANIMLQNYVNQREEYNYDILKEQFTFIKNASTSIVYMQFANFMNIDNPLSPVIRYQKLYRRSIN
ILSINNINNNEAVVTFESLAKNSTDAILENMVWEARIGFIMDSISTNTSPDMPFNFTVTSYKLKLLRNKNQK

Sequences:

>Translated_232_residues
MDPLTNAIQEYIKSGEYFIDARKWYNFKYILPLSHRSLLLLICTIFTLLLTLICININILLPINKKVKYLIKDDAEKQAA
VTNTKHSTLVKPYISIANIMLQNYVNQREEYNYDILKEQFTFIKNASTSIVYMQFANFMNIDNPLSPVIRYQKLYRRSIN
ILSINNINNNEAVVTFESLAKNSTDAILENMVWEARIGFIMDSISTNTSPDMPFNFTVTSYKLKLLRNKNQK
>Mature_232_residues
MDPLTNAIQEYIKSGEYFIDARKWYNFKYILPLSHRSLLLLICTIFTLLLTLICININILLPINKKVKYLIKDDAEKQAA
VTNTKHSTLVKPYISIANIMLQNYVNQREEYNYDILKEQFTFIKNASTSIVYMQFANFMNIDNPLSPVIRYQKLYRRSIN
ILSINNINNNEAVVTFESLAKNSTDAILENMVWEARIGFIMDSISTNTSPDMPFNFTVTSYKLKLLRNKNQK

Specific function: Unknown

COG id: COG3736

COG function: function code U; Type IV secretory pathway, component VirB8

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27048; Mature: 27048

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPLTNAIQEYIKSGEYFIDARKWYNFKYILPLSHRSLLLLICTIFTLLLTLICININIL
CCHHHHHHHHHHHCCCEEEEEEHEECEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEE
LPINKKVKYLIKDDAEKQAAVTNTKHSTLVKPYISIANIMLQNYVNQREEYNYDILKEQF
EECCHHHHEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TFIKNASTSIVYMQFANFMNIDNPLSPVIRYQKLYRRSINILSINNINNNEAVVTFESLA
HHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEHHHHH
KNSTDAILENMVWEARIGFIMDSISTNTSPDMPFNFTVTSYKLKLLRNKNQK
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHEEHHCCCCC
>Mature Secondary Structure
MDPLTNAIQEYIKSGEYFIDARKWYNFKYILPLSHRSLLLLICTIFTLLLTLICININIL
CCHHHHHHHHHHHCCCEEEEEEHEECEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEE
LPINKKVKYLIKDDAEKQAAVTNTKHSTLVKPYISIANIMLQNYVNQREEYNYDILKEQF
EECCHHHHEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TFIKNASTSIVYMQFANFMNIDNPLSPVIRYQKLYRRSINILSINNINNNEAVVTFESLA
HHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEHHHHH
KNSTDAILENMVWEARIGFIMDSISTNTSPDMPFNFTVTSYKLKLLRNKNQK
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA