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The map label for this gene is trbG [H]

Identifier: 15892307

GI number: 15892307

Start: 385301

End: 386053

Strand: Reverse

Name: trbG [H]

Synonym: RC0384

Alternate gene names: 15892307

Gene position: 386053-385301 (Counterclockwise)

Preceding gene: 15892308

Following gene: 15892306

Centisome position: 30.43

GC content: 35.99

Gene sequence:

>753_bases
ATGAAGCAACTAATAATATTTTGTACTTTTATAATACTTACATTAGATGTATTTGCTCTTACTATATCACGACCTCTAGG
TCGAGACCCACGTCTAAGAGTTATGACTTATAACCCTGACGATGTTTTCAAATTCACAGGATATTACGGCTATCAAGCAA
GTATAGAACTAGCAAGAGACGAGGAAATAGTAAGTATTTCTATGGGAGATACTACTTCATGGCAAATAGTACCTGCCGGT
CATAGGATTTTTATTAAACCGATGGAACCGGATGCTACTACTAATATGACTTTAATTACTAATAAACGGACGTACTTCTT
TGAACTATATGCCGCCGAAACTCTTGATATGCGTGATCCTGAAATGGTCTTTAACGTAAAGTTTCTTTATCCGGATGACG
AAAATGACAATATGAGCGGTCATATGCAAACTTTTTCTGCTGCCCTAGCAAGTCCCGACCTGACTCATCCTGAAAAATAT
AACTTTAATTACTATATTAGCGGCAGCGAAGAAATAGCTCCTATTAAAATTTTTGATGACGGTGAGTTTACTTATCTGCA
ATTTAGAGATAAAAACGCTGAAATTTCCGGTATTTTTGCTGTAGATGATTCACTTCGAGAATCTTTAGTAAATTATCGCC
TTGCTCAAGATAATCCTAATATGGTGATCCTTGAACAGGTTTTTCCTAAGCTCGCTATACGTAAGGGCAAAAAAGTCACA
TGCGTATTTAATCAGTCTTTCAAAGCGTATTAA

Upstream 100 bases:

>100_bases
ATGGATTCTATCAGTACAAATACATCACCTGATATGCCGTTCAATTTTACCGTTACTAGTTACAAGCTAAAATTATTAAG
GAATAAAAATCAGAAATAAT

Downstream 100 bases:

>100_bases
TGTCTACCAACGTCATTGCGGCAATGACGATGAAACTGATTCACGTCACAATACTTTTCTTACAATAACAATATAATTAT
GCATAATTTAATATATTTCT

Product: conjugal transfer protein trbG precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKQLIIFCTFIILTLDVFALTISRPLGRDPRLRVMTYNPDDVFKFTGYYGYQASIELARDEEIVSISMGDTTSWQIVPAG
HRIFIKPMEPDATTNMTLITNKRTYFFELYAAETLDMRDPEMVFNVKFLYPDDENDNMSGHMQTFSAALASPDLTHPEKY
NFNYYISGSEEIAPIKIFDDGEFTYLQFRDKNAEISGIFAVDDSLRESLVNYRLAQDNPNMVILEQVFPKLAIRKGKKVT
CVFNQSFKAY

Sequences:

>Translated_250_residues
MKQLIIFCTFIILTLDVFALTISRPLGRDPRLRVMTYNPDDVFKFTGYYGYQASIELARDEEIVSISMGDTTSWQIVPAG
HRIFIKPMEPDATTNMTLITNKRTYFFELYAAETLDMRDPEMVFNVKFLYPDDENDNMSGHMQTFSAALASPDLTHPEKY
NFNYYISGSEEIAPIKIFDDGEFTYLQFRDKNAEISGIFAVDDSLRESLVNYRLAQDNPNMVILEQVFPKLAIRKGKKVT
CVFNQSFKAY
>Mature_250_residues
MKQLIIFCTFIILTLDVFALTISRPLGRDPRLRVMTYNPDDVFKFTGYYGYQASIELARDEEIVSISMGDTTSWQIVPAG
HRIFIKPMEPDATTNMTLITNKRTYFFELYAAETLDMRDPEMVFNVKFLYPDDENDNMSGHMQTFSAALASPDLTHPEKY
NFNYYISGSEEIAPIKIFDDGEFTYLQFRDKNAEISGIFAVDDSLRESLVNYRLAQDNPNMVILEQVFPKLAIRKGKKVT
CVFNQSFKAY

Specific function: Component of the type IV secretion system virB/virD4 which could be a major virulence determinant for subversion of human endothelial cell (HEC) function [H]

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014148 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 28834; Mature: 28834

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLIIFCTFIILTLDVFALTISRPLGRDPRLRVMTYNPDDVFKFTGYYGYQASIELARD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECEEEEEEEECC
EEIVSISMGDTTSWQIVPAGHRIFIKPMEPDATTNMTLITNKRTYFFELYAAETLDMRDP
CEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCEEEEEEEEEEECCCCCC
EMVFNVKFLYPDDENDNMSGHMQTFSAALASPDLTHPEKYNFNYYISGSEEIAPIKIFDD
CEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCEECEEEEECCCCCEEEEEEEEC
GEFTYLQFRDKNAEISGIFAVDDSLRESLVNYRLAQDNPNMVILEQVFPKLAIRKGKKVT
CCEEEEEEECCCCCEEEEEEECHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHCCCCEEE
CVFNQSFKAY
EEECCCCCCC
>Mature Secondary Structure
MKQLIIFCTFIILTLDVFALTISRPLGRDPRLRVMTYNPDDVFKFTGYYGYQASIELARD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECEEEEEEEECC
EEIVSISMGDTTSWQIVPAGHRIFIKPMEPDATTNMTLITNKRTYFFELYAAETLDMRDP
CEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCEEEEECCCEEEEEEEEEEECCCCCC
EMVFNVKFLYPDDENDNMSGHMQTFSAALASPDLTHPEKYNFNYYISGSEEIAPIKIFDD
CEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCEECEEEEECCCCCEEEEEEEEC
GEFTYLQFRDKNAEISGIFAVDDSLRESLVNYRLAQDNPNMVILEQVFPKLAIRKGKKVT
CCEEEEEEECCCCCEEEEEEECHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHCCCCEEE
CVFNQSFKAY
EEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA