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The map label for this gene is recN [H]

Identifier: 15892152

GI number: 15892152

Start: 238565

End: 240202

Strand: Reverse

Name: recN [H]

Synonym: RC0229

Alternate gene names: 15892152

Gene position: 240202-238565 (Counterclockwise)

Preceding gene: 15892153

Following gene: 15892151

Centisome position: 18.93

GC content: 32.91

Gene sequence:

>1638_bases
ATGTTCTACAGTCTCTCAGTTAAAAACTTCATTCTGATAGACGAGCTGGAAATTGAGTTTAATAAAGGTTTATGTGTTAT
TACCGGTGAAACGGGAGCCGGTAAATCTATTTTACTTGATGCTATTTTATTTTGCTTAGGTTATAAAACTTCAAATAATA
TAATAAAGCGTGGAAAAGATTACGCTGTTGTTAATATAATATTCTCTTTAAATGAAGAAATAAAAAATTTTCTGGTTCAA
AATTTTATTGAACCTGAAGAGTTATTGTTTGTAAAGTGTCTGCAAAAAGCCGAAGGACGAAAAAATTTTTTCATTAATAA
TCAAGTGGTTACTAAAGCTCTTATGCAGCAATTAGCTACTTATTTATTCGAGCTTCATGGACAAAATAATAATATTTCTC
TTCTAGAAGCAAATACGCAGCGTGATATTTTAGATAGTTATGGAAATCTTTTGGACTTTCGAGCGGAGCTTTCCAAATGC
TATCAGGCTTGGCAAAATACTCGGAAAGAAATGGCCGAAATAACACTTAAGCAAAATTCTATAGAACAAGAAATTGATTA
TTTGAGCTTTGCAACGGAAGAATTAACTAAACTGAACATTCAAACAGGTGAAGAAGAAAAATTAGCAAATCTACGAAAAG
ATTTGCAAAATAAAGATAAGGATTTACAGCTAATAAAAGATATTATAGAACAGATTAATAACCCTGAAATAAATACATCG
ATTAATAGAGCAGAGAAATTATTAGCAAGGCAAGGCAACAATGAGCGTTTTGAAGCTATCGTTACAAGTTTAGAGGAAGC
CTATAATAATCTAGAAGAAGCACGCCAAGAATTATCAAATCTGTTAGATAGTTTCAATTATGAGGAATATAATCTTGAAG
AAACAGAAGAAAGATTATTTTTAATAAAAGCTATTAGCCGTAAATATAATGTTCCTGCTGATGCGTTAGGTGTATTTTTA
GATAAATCTTTAGAGCAGCTCAGTATATTAAAAAACAAAATAGCAAATAGTAATGAGTTGAAAGCTCAAGAAGTACTACT
GCAGAAAAAATATTATGAACTAGCGAGTAATTTATCTGCAAAGCGTCTTATTGTTGCAAAACATCTAGAAGAATCGTTGC
ATCAGGAGCTAAAGCAGCTTAAAATGGCGAAAGCAATTTTTGAGATTGAGATAAATACTAAAGAACCAACAGCCGACGGT
AATGACGATATTGTGTTTAAAGCGTCTACTAACCCGGGAACGGCAGCTGCAGCAATTAATAAAATCGCTTCCGGCGGTGA
ATTATCAAGATTCATGTTAGCTTTAAAAACTGCTCTGTTTGATAAAATGGTAAAACCATCTATTATATTTGATGAAATAG
ATGTCGGGATTAGCGGAGAGGTCGCAGATAAAGTAGGTGAGCGATTAAAAAAACTTAGTAGCGTTACTCAAGTAATAGTT
ATTACGCACCAGCCGCAAGTAGCAGGTAAAGCGGATTTGCATATAAAAATTGAGAAAACACAGCTAGAGAAAGAAACGAA
AGTAACAGTAAAAGCTTTAAATTTAGCTGAAAGACAGGAGGAACTCGCCCGCATGATTTCAGGTAAAACAATCACCAAAG
CAAGTTTAAAAGCAGCAAAGGAGTTGTTGCATTTGTAA

Upstream 100 bases:

>100_bases
GCAAAAAAATATGCCTCAGTGCTAGGTTACAACTATCCTGATAGTCAATGGTATAGTTATGCGTACAGGCTAGTTCAGAA
CCACCAAAATTAAGCGGCAT

Downstream 100 bases:

>100_bases
TAGGCACTAGCGGTACGGTTTTTATGTCATTCCTGCGAAAGCGAGAATCCAGAAAAATAACCTTAATATTGCTACAAGAA
ATTACATATTAATTAACAAA

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MFYSLSVKNFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNIIKRGKDYAVVNIIFSLNEEIKNFLVQ
NFIEPEELLFVKCLQKAEGRKNFFINNQVVTKALMQQLATYLFELHGQNNNISLLEANTQRDILDSYGNLLDFRAELSKC
YQAWQNTRKEMAEITLKQNSIEQEIDYLSFATEELTKLNIQTGEEEKLANLRKDLQNKDKDLQLIKDIIEQINNPEINTS
INRAEKLLARQGNNERFEAIVTSLEEAYNNLEEARQELSNLLDSFNYEEYNLEETEERLFLIKAISRKYNVPADALGVFL
DKSLEQLSILKNKIANSNELKAQEVLLQKKYYELASNLSAKRLIVAKHLEESLHQELKQLKMAKAIFEIEINTKEPTADG
NDDIVFKASTNPGTAAAAINKIASGGELSRFMLALKTALFDKMVKPSIIFDEIDVGISGEVADKVGERLKKLSSVTQVIV
ITHQPQVAGKADLHIKIEKTQLEKETKVTVKALNLAERQEELARMISGKTITKASLKAAKELLHL

Sequences:

>Translated_545_residues
MFYSLSVKNFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNIIKRGKDYAVVNIIFSLNEEIKNFLVQ
NFIEPEELLFVKCLQKAEGRKNFFINNQVVTKALMQQLATYLFELHGQNNNISLLEANTQRDILDSYGNLLDFRAELSKC
YQAWQNTRKEMAEITLKQNSIEQEIDYLSFATEELTKLNIQTGEEEKLANLRKDLQNKDKDLQLIKDIIEQINNPEINTS
INRAEKLLARQGNNERFEAIVTSLEEAYNNLEEARQELSNLLDSFNYEEYNLEETEERLFLIKAISRKYNVPADALGVFL
DKSLEQLSILKNKIANSNELKAQEVLLQKKYYELASNLSAKRLIVAKHLEESLHQELKQLKMAKAIFEIEINTKEPTADG
NDDIVFKASTNPGTAAAAINKIASGGELSRFMLALKTALFDKMVKPSIIFDEIDVGISGEVADKVGERLKKLSSVTQVIV
ITHQPQVAGKADLHIKIEKTQLEKETKVTVKALNLAERQEELARMISGKTITKASLKAAKELLHL
>Mature_545_residues
MFYSLSVKNFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNIIKRGKDYAVVNIIFSLNEEIKNFLVQ
NFIEPEELLFVKCLQKAEGRKNFFINNQVVTKALMQQLATYLFELHGQNNNISLLEANTQRDILDSYGNLLDFRAELSKC
YQAWQNTRKEMAEITLKQNSIEQEIDYLSFATEELTKLNIQTGEEEKLANLRKDLQNKDKDLQLIKDIIEQINNPEINTS
INRAEKLLARQGNNERFEAIVTSLEEAYNNLEEARQELSNLLDSFNYEEYNLEETEERLFLIKAISRKYNVPADALGVFL
DKSLEQLSILKNKIANSNELKAQEVLLQKKYYELASNLSAKRLIVAKHLEESLHQELKQLKMAKAIFEIEINTKEPTADG
NDDIVFKASTNPGTAAAAINKIASGGELSRFMLALKTALFDKMVKPSIIFDEIDVGISGEVADKVGERLKKLSSVTQVIV
ITHQPQVAGKADLHIKIEKTQLEKETKVTVKALNLAERQEELARMISGKTITKASLKAAKELLHL

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=552, Percent_Identity=32.2463768115942, Blast_Score=273, Evalue=3e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61731; Mature: 61731

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYSLSVKNFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNIIKRGKD
CEEEEECCCEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCC
YAVVNIIFSLNEEIKNFLVQNFIEPEELLFVKCLQKAEGRKNFFINNQVVTKALMQQLAT
EEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHH
YLFELHGQNNNISLLEANTQRDILDSYGNLLDFRAELSKCYQAWQNTRKEMAEITLKQNS
HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IEQEIDYLSFATEELTKLNIQTGEEEKLANLRKDLQNKDKDLQLIKDIIEQINNPEINTS
HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCH
INRAEKLLARQGNNERFEAIVTSLEEAYNNLEEARQELSNLLDSFNYEEYNLEETEERLF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LIKAISRKYNVPADALGVFLDKSLEQLSILKNKIANSNELKAQEVLLQKKYYELASNLSA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCH
KRLIVAKHLEESLHQELKQLKMAKAIFEIEINTKEPTADGNDDIVFKASTNPGTAAAAIN
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHH
KIASGGELSRFMLALKTALFDKMVKPSIIFDEIDVGISGEVADKVGERLKKLSSVTQVIV
HHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEE
ITHQPQVAGKADLHIKIEKTQLEKETKVTVKALNLAERQEELARMISGKTITKASLKAAK
EECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ELLHL
HHHCC
>Mature Secondary Structure
MFYSLSVKNFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSNNIIKRGKD
CEEEEECCCEEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCC
YAVVNIIFSLNEEIKNFLVQNFIEPEELLFVKCLQKAEGRKNFFINNQVVTKALMQQLAT
EEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHH
YLFELHGQNNNISLLEANTQRDILDSYGNLLDFRAELSKCYQAWQNTRKEMAEITLKQNS
HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IEQEIDYLSFATEELTKLNIQTGEEEKLANLRKDLQNKDKDLQLIKDIIEQINNPEINTS
HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCH
INRAEKLLARQGNNERFEAIVTSLEEAYNNLEEARQELSNLLDSFNYEEYNLEETEERLF
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LIKAISRKYNVPADALGVFLDKSLEQLSILKNKIANSNELKAQEVLLQKKYYELASNLSA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCH
KRLIVAKHLEESLHQELKQLKMAKAIFEIEINTKEPTADGNDDIVFKASTNPGTAAAAIN
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHH
KIASGGELSRFMLALKTALFDKMVKPSIIFDEIDVGISGEVADKVGERLKKLSSVTQVIV
HHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEE
ITHQPQVAGKADLHIKIEKTQLEKETKVTVKALNLAERQEELARMISGKTITKASLKAAK
EECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ELLHL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA