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The map label for this gene is yfiO [C]

Identifier: 15892153

GI number: 15892153

Start: 240210

End: 240965

Strand: Reverse

Name: yfiO [C]

Synonym: RC0230

Alternate gene names: 15892153

Gene position: 240965-240210 (Counterclockwise)

Preceding gene: 15892154

Following gene: 15892152

Centisome position: 18.99

GC content: 34.92

Gene sequence:

>756_bases
ATGAAATTAACAAAATTATTGAGTACCCTTTTAGTTATAGGGTTAGTTTTAGGCGGGTGCAAAAACAAAAAAAACAGTGA
TGACATAGTAGTCCCTATCGCTACCCTTTATAATGAAGGTATTACCTTATTGGAAAAGAAAAAATATAAGAACGCTGCAG
AAGAATTCGGAAGAGTATTGTACCAGCATCCAGGTAATGAAATGACGCCGCAAGCCGAATTGATGCAGGCTTATTCTTTA
TTTCTCGCCGCTCAATATGAAGAAGCGGTTGATGTGCTTGATATGTTCATTAAGTTGCACCCTGCAAATGTTGACATTGC
TTATGCATATTACCTTAAAGCATTATCATATTATATGTTAATTTCAGACGTAAATCATGATCAATCTAGAACTTTCCTAG
CTAAAGATAGTTTTGAAGACGTAATAGCAAAATTCCCAAATACTAAATATGCTATTGATTCATCTTTAAAAATTGACCTA
GTAAACGATCATTTAGCAGGTAAAGAGATGATGGTAGGTCGCTTTTACTTAAAGAAAAAGAATCCGATGGCAGCTATAAA
TAGATTTGAAGAGGTAATTGATAATTATCAAACTACTTCTCACTCGGTAGAAGCTCTTTACCGTTTAGCCGAGAGTTATA
TGATGCTTGGACTTTCGGATGAAGCAAAAAAATATGCCTCAGTGCTAGGTTACAACTATCCTGATAGTCAATGGTATAGT
TATGCGTACAGGCTAGTTCAGAACCACCAAAATTAA

Upstream 100 bases:

>100_bases
TGAATAGGTCTAATTTATAAGTTTGTGAGATTTTAAATTGAATCCTTGAAATTCTGTAAGCCTATATGTATATTTAGTTA
TTAACTGAATTTAAGTTCTT

Downstream 100 bases:

>100_bases
GCGGCATATGTTCTACAGTCTCTCAGTTAAAAACTTCATTCTGATAGACGAGCTGGAAATTGAGTTTAATAAAGGTTTAT
GTGTTATTACCGGTGAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKLTKLLSTLLVIGLVLGGCKNKKNSDDIVVPIATLYNEGITLLEKKKYKNAAEEFGRVLYQHPGNEMTPQAELMQAYSL
FLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDL
VNDHLAGKEMMVGRFYLKKKNPMAAINRFEEVIDNYQTTSHSVEALYRLAESYMMLGLSDEAKKYASVLGYNYPDSQWYS
YAYRLVQNHQN

Sequences:

>Translated_251_residues
MKLTKLLSTLLVIGLVLGGCKNKKNSDDIVVPIATLYNEGITLLEKKKYKNAAEEFGRVLYQHPGNEMTPQAELMQAYSL
FLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDL
VNDHLAGKEMMVGRFYLKKKNPMAAINRFEEVIDNYQTTSHSVEALYRLAESYMMLGLSDEAKKYASVLGYNYPDSQWYS
YAYRLVQNHQN
>Mature_251_residues
MKLTKLLSTLLVIGLVLGGCKNKKNSDDIVVPIATLYNEGITLLEKKKYKNAAEEFGRVLYQHPGNEMTPQAELMQAYSL
FLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYMLISDVNHDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDL
VNDHLAGKEMMVGRFYLKKKNPMAAINRFEEVIDNYQTTSHSVEALYRLAESYMMLGLSDEAKKYASVLGYNYPDSQWYS
YAYRLVQNHQN

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=244, Percent_Identity=22.5409836065574, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28730; Mature: 28730

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTKLLSTLLVIGLVLGGCKNKKNSDDIVVPIATLYNEGITLLEKKKYKNAAEEFGRVL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHH
YQHPGNEMTPQAELMQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYML
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ISDVNHDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKK
HHCCCCCCCCEEHHHCHHHHHHHHCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHCCC
NPMAAINRFEEVIDNYQTTSHSVEALYRLAESYMMLGLSDEAKKYASVLGYNYPDSQWYS
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHH
YAYRLVQNHQN
HHHHHHHCCCC
>Mature Secondary Structure
MKLTKLLSTLLVIGLVLGGCKNKKNSDDIVVPIATLYNEGITLLEKKKYKNAAEEFGRVL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHH
YQHPGNEMTPQAELMQAYSLFLAAQYEEAVDVLDMFIKLHPANVDIAYAYYLKALSYYML
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ISDVNHDQSRTFLAKDSFEDVIAKFPNTKYAIDSSLKIDLVNDHLAGKEMMVGRFYLKKK
HHCCCCCCCCEEHHHCHHHHHHHHCCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHCCC
NPMAAINRFEEVIDNYQTTSHSVEALYRLAESYMMLGLSDEAKKYASVLGYNYPDSQWYS
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHH
YAYRLVQNHQN
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]