| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
Click here to switch to the map view.
The map label for this gene is yfjG [C]
Identifier: 15892131
GI number: 15892131
Start: 216554
End: 216994
Strand: Reverse
Name: yfjG [C]
Synonym: RC0208
Alternate gene names: 15892131
Gene position: 216994-216554 (Counterclockwise)
Preceding gene: 15892132
Following gene: 15892129
Centisome position: 17.1
GC content: 31.29
Gene sequence:
>441_bases ATGCCTTCCCTTCAACACACTAAAATTTTACCCTATAAACCGCAAGAATTGTTTGATTTGGTCTGGGATGTAAAATCTTA TCCTAAATTCTTGCCTTGGTGTTCTGCTTCTAGAATTATTTCAGAAAATAATCAAGAGGTTATTGCTGAATTAGTAATTC AGTTAAAAGGCTTTTCAGAAAAATATAACTCACGAGTTACAAGCGAAATAACAGATGATGGAATATATTTGATTAATACG GTAGCTATTTCAGGACCTTTTGAATATTTAAAAAGTACTTGGCAATTTGTGCCATGCACGGCAGGAACTGCATTAAAATT CTTTATTGATTTTAAAATGAAATCCGTAATACTGGATAAATTAATCGGCACTTATTTTACCAAAGCAACCGAAAAAATGA TTATAGCTTTTGAAAGGAGAGCTAAAGAGGTTATTAAATAA
Upstream 100 bases:
>100_bases AAGAAAATTTACCAAAAGAAAAAGAAATTGGCGGTGTTAAAGGTCTAGAACCGACAAGATACGGGGACTGGCAGCATAAA GGTAAAGTTACAGATTTCTA
Downstream 100 bases:
>100_bases AAAAGAGTAAGGTTAGAGATCTATAACCTTACTCTTTAGAAAGTTTTGTATTTAGTTACTAGGCAATATCAGATATATAT CCTGCATCTCCCTCATCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MPSLQHTKILPYKPQELFDLVWDVKSYPKFLPWCSASRIISENNQEVIAELVIQLKGFSEKYNSRVTSEITDDGIYLINT VAISGPFEYLKSTWQFVPCTAGTALKFFIDFKMKSVILDKLIGTYFTKATEKMIIAFERRAKEVIK
Sequences:
>Translated_146_residues MPSLQHTKILPYKPQELFDLVWDVKSYPKFLPWCSASRIISENNQEVIAELVIQLKGFSEKYNSRVTSEITDDGIYLINT VAISGPFEYLKSTWQFVPCTAGTALKFFIDFKMKSVILDKLIGTYFTKATEKMIIAFERRAKEVIK >Mature_145_residues PSLQHTKILPYKPQELFDLVWDVKSYPKFLPWCSASRIISENNQEVIAELVIQLKGFSEKYNSRVTSEITDDGIYLINTV AISGPFEYLKSTWQFVPCTAGTALKFFIDFKMKSVILDKLIGTYFTKATEKMIIAFERRAKEVIK
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Homo sapiens, GI13376737, Length=139, Percent_Identity=32.3741007194245, Blast_Score=75, Evalue=1e-14, Organism=Homo sapiens, GI151101384, Length=143, Percent_Identity=27.972027972028, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI151101386, Length=143, Percent_Identity=27.972027972028, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1788972, Length=145, Percent_Identity=32.4137931034483, Blast_Score=93, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 16841; Mature: 16710
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLQHTKILPYKPQELFDLVWDVKSYPKFLPWCSASRIISENNQEVIAELVIQLKGFSE CCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCCHH KYNSRVTSEITDDGIYLINTVAISGPFEYLKSTWQFVPCTAGTALKFFIDFKMKSVILDK HHCCHHHHHHCCCCEEEEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH LIGTYFTKATEKMIIAFERRAKEVIK HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSLQHTKILPYKPQELFDLVWDVKSYPKFLPWCSASRIISENNQEVIAELVIQLKGFSE CCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCCHH KYNSRVTSEITDDGIYLINTVAISGPFEYLKSTWQFVPCTAGTALKFFIDFKMKSVILDK HHCCHHHHHHCCCCEEEEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH LIGTYFTKATEKMIIAFERRAKEVIK HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]