Definition Rickettsia conorii str. Malish 7, complete genome.
Accession NC_003103
Length 1,268,755

Click here to switch to the map view.

The map label for this gene is yfjG [C]

Identifier: 15892131

GI number: 15892131

Start: 216554

End: 216994

Strand: Reverse

Name: yfjG [C]

Synonym: RC0208

Alternate gene names: 15892131

Gene position: 216994-216554 (Counterclockwise)

Preceding gene: 15892132

Following gene: 15892129

Centisome position: 17.1

GC content: 31.29

Gene sequence:

>441_bases
ATGCCTTCCCTTCAACACACTAAAATTTTACCCTATAAACCGCAAGAATTGTTTGATTTGGTCTGGGATGTAAAATCTTA
TCCTAAATTCTTGCCTTGGTGTTCTGCTTCTAGAATTATTTCAGAAAATAATCAAGAGGTTATTGCTGAATTAGTAATTC
AGTTAAAAGGCTTTTCAGAAAAATATAACTCACGAGTTACAAGCGAAATAACAGATGATGGAATATATTTGATTAATACG
GTAGCTATTTCAGGACCTTTTGAATATTTAAAAAGTACTTGGCAATTTGTGCCATGCACGGCAGGAACTGCATTAAAATT
CTTTATTGATTTTAAAATGAAATCCGTAATACTGGATAAATTAATCGGCACTTATTTTACCAAAGCAACCGAAAAAATGA
TTATAGCTTTTGAAAGGAGAGCTAAAGAGGTTATTAAATAA

Upstream 100 bases:

>100_bases
AAGAAAATTTACCAAAAGAAAAAGAAATTGGCGGTGTTAAAGGTCTAGAACCGACAAGATACGGGGACTGGCAGCATAAA
GGTAAAGTTACAGATTTCTA

Downstream 100 bases:

>100_bases
AAAAGAGTAAGGTTAGAGATCTATAACCTTACTCTTTAGAAAGTTTTGTATTTAGTTACTAGGCAATATCAGATATATAT
CCTGCATCTCCCTCATCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MPSLQHTKILPYKPQELFDLVWDVKSYPKFLPWCSASRIISENNQEVIAELVIQLKGFSEKYNSRVTSEITDDGIYLINT
VAISGPFEYLKSTWQFVPCTAGTALKFFIDFKMKSVILDKLIGTYFTKATEKMIIAFERRAKEVIK

Sequences:

>Translated_146_residues
MPSLQHTKILPYKPQELFDLVWDVKSYPKFLPWCSASRIISENNQEVIAELVIQLKGFSEKYNSRVTSEITDDGIYLINT
VAISGPFEYLKSTWQFVPCTAGTALKFFIDFKMKSVILDKLIGTYFTKATEKMIIAFERRAKEVIK
>Mature_145_residues
PSLQHTKILPYKPQELFDLVWDVKSYPKFLPWCSASRIISENNQEVIAELVIQLKGFSEKYNSRVTSEITDDGIYLINTV
AISGPFEYLKSTWQFVPCTAGTALKFFIDFKMKSVILDKLIGTYFTKATEKMIIAFERRAKEVIK

Specific function: Unknown

COG id: COG2867

COG function: function code I; Oligoketide cyclase/lipid transport protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0083 family [H]

Homologues:

Organism=Homo sapiens, GI13376737, Length=139, Percent_Identity=32.3741007194245, Blast_Score=75, Evalue=1e-14,
Organism=Homo sapiens, GI151101384, Length=143, Percent_Identity=27.972027972028, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI151101386, Length=143, Percent_Identity=27.972027972028, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI1788972, Length=145, Percent_Identity=32.4137931034483, Blast_Score=93, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005031 [H]

Pfam domain/function: PF03364 Polyketide_cyc [H]

EC number: NA

Molecular weight: Translated: 16841; Mature: 16710

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLQHTKILPYKPQELFDLVWDVKSYPKFLPWCSASRIISENNQEVIAELVIQLKGFSE
CCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCCHH
KYNSRVTSEITDDGIYLINTVAISGPFEYLKSTWQFVPCTAGTALKFFIDFKMKSVILDK
HHCCHHHHHHCCCCEEEEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LIGTYFTKATEKMIIAFERRAKEVIK
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PSLQHTKILPYKPQELFDLVWDVKSYPKFLPWCSASRIISENNQEVIAELVIQLKGFSE
CCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCCHH
KYNSRVTSEITDDGIYLINTVAISGPFEYLKSTWQFVPCTAGTALKFFIDFKMKSVILDK
HHCCHHHHHHCCCCEEEEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LIGTYFTKATEKMIIAFERRAKEVIK
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]