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The map label for this gene is 15892132

Identifier: 15892132

GI number: 15892132

Start: 216994

End: 217275

Strand: Reverse

Name: 15892132

Synonym: RC0209

Alternate gene names: NA

Gene position: 217275-216994 (Counterclockwise)

Preceding gene: 15892134

Following gene: 15892131

Centisome position: 17.13

GC content: 37.59

Gene sequence:

>282_bases
ATGGACGATAAAAAAGATAATAGACATCTTTCCAAACCAGCTTATAGAGAGGAATGTACAGGAGACACGGAACGCAGCAC
TACAGCGTATATGGACATACTTGAGGATGTGAGTACCGGATCGACGTCTAAATTACCTCTAGAAGCGAAGTTTGTAAAGA
TATCTAATAATATATCAGAAAAAGAAAATTTACCAAAAGAAAAAGAAATTGGCGGTGTTAAAGGTCTAGAACCGACAAGA
TACGGGGACTGGCAGCATAAAGGTAAAGTTACAGATTTCTAA

Upstream 100 bases:

>100_bases
TGACATAATGAACATGATGATCACTTGCTAATTCTATCTTGCTATTTTCAGCTAAACGACTATTAATATAAATACGGTTA
TATTTCATATATTTAGTACT

Downstream 100 bases:

>100_bases
TGCCTTCCCTTCAACACACTAAAATTTTACCCTATAAACCGCAAGAATTGTTTGATTTGGTCTGGGATGTAAAATCTTAT
CCTAAATTCTTGCCTTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MDDKKDNRHLSKPAYREECTGDTERSTTAYMDILEDVSTGSTSKLPLEAKFVKISNNISEKENLPKEKEIGGVKGLEPTR
YGDWQHKGKVTDF

Sequences:

>Translated_93_residues
MDDKKDNRHLSKPAYREECTGDTERSTTAYMDILEDVSTGSTSKLPLEAKFVKISNNISEKENLPKEKEIGGVKGLEPTR
YGDWQHKGKVTDF
>Mature_93_residues
MDDKKDNRHLSKPAYREECTGDTERSTTAYMDILEDVSTGSTSKLPLEAKFVKISNNISEKENLPKEKEIGGVKGLEPTR
YGDWQHKGKVTDF

Specific function: Unknown

COG id: COG5508

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RPE1 insert domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y209_RICCN (Q92J60)

Other databases:

- EMBL:   AE006914
- PIR:   A97726
- RefSeq:   NP_359846.1
- GeneID:   927977
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0209
- NMPDR:   fig|272944.1.peg.209
- OMA:   DTERSTT
- ProtClustDB:   CLSK881916
- BioCyc:   RCON272944:RC0209-MONOMER
- InterPro:   IPR012875
- InterPro:   IPR005728
- TIGRFAMs:   TIGR01045

Pfam domain/function: PF07896 DUF1674

EC number: NA

Molecular weight: Translated: 10535; Mature: 10535

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDKKDNRHLSKPAYREECTGDTERSTTAYMDILEDVSTGSTSKLPLEAKFVKISNNISE
CCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCH
KENLPKEKEIGGVKGLEPTRYGDWQHKGKVTDF
HHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDDKKDNRHLSKPAYREECTGDTERSTTAYMDILEDVSTGSTSKLPLEAKFVKISNNISE
CCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCH
KENLPKEKEIGGVKGLEPTRYGDWQHKGKVTDF
HHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893