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The map label for this gene is dapB [H]

Identifier: 15892113

GI number: 15892113

Start: 197898

End: 198755

Strand: Reverse

Name: dapB [H]

Synonym: RC0190

Alternate gene names: 15892113

Gene position: 198755-197898 (Counterclockwise)

Preceding gene: 15892114

Following gene: 15892112

Centisome position: 15.67

GC content: 31.24

Gene sequence:

>858_bases
TTGGCGTCGTATAATAAGATCTGCGGTTCAAACTATATTAAGTATACACTGCGATCCAAGGACTTTAGATGCCTTGCTCT
TGTCCAAATTAAACTTCGTCTACTTACTGTTCATTTATTAGGAGTATACATTGCCAATATGTTAAATATCGGTCTTAGTG
GTTCTACCGGTAAAATGGGAGAAACCATTCTAGAGAGAATAGATAAATTTAAAGATTGCAAAATTGCAGCAAAATTTAAT
AGTACTAATAATTTAGATGATTTAGATAATTTTTGTAAAAATTCTGATGTGATCATCGATTTTTCTACCCCTGAAATATT
AGAAAAATTAATTAATTATGCATTAAAACATAATACAAAATTAGTAATCGGAACCACAGGTCTCCAACCTCAACATTTTA
AGCTTTTAGAAAAAGCAGCTCAAACTTTACCTGTTTTATATTCTGCAAATATGAGTATAGGAGCTAATTTGCTTAGCTAT
CTAGCTAAAGAAGTAACAAAAATACTAGATGATTACGATGTTGAAATTCTAGAAACGCATCACCGTAATAAAAAAGATTC
ACCCTCAGGAACTGCTGTTATGCTTGCTGAAACAATTGCCAGCAAAAAAGGATTAAATATAACATTTAATCGTGGTAATA
GACTAAGAAGCGAAAAAGAAATAGGTATTTCCTCGCTTCGTGGTGGAAATGTTCACGGTATACATGAAATATCTTTCCTA
GGTGACGATGAAATAATCACCTTAAAACATGAAGCTCTGAATAAAAATTCTTTTTCTATTGGTGCAATTAAAGCCGCTAT
TTGGCTACAAGATAAACCTTCTGCTTTATATTCAATGCAAGATATTTATAAAATATAA

Upstream 100 bases:

>100_bases
GTAACTATTCCAGCAAAAATCTTATTAATTTTCGCTAAAAAATACCTCAAAATAGCCAATCAATTAGAAATATTCACAGA
ACCTAGTTTAATTTGAAAAA

Downstream 100 bases:

>100_bases
TTAATATAGCTTGAAAAAATACCTTTAAGAGGCTATATTTTATTATGTAAATAACATAATCCTAAGGTTACTTATGATCG
ATTATACAAAAACTTTAACT

Product: dihydrodipicolinate reductase

Products: NA

Alternate protein names: DHPR [H]

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MASYNKICGSNYIKYTLRSKDFRCLALVQIKLRLLTVHLLGVYIANMLNIGLSGSTGKMGETILERIDKFKDCKIAAKFN
STNNLDDLDNFCKNSDVIIDFSTPEILEKLINYALKHNTKLVIGTTGLQPQHFKLLEKAAQTLPVLYSANMSIGANLLSY
LAKEVTKILDDYDVEILETHHRNKKDSPSGTAVMLAETIASKKGLNITFNRGNRLRSEKEIGISSLRGGNVHGIHEISFL
GDDEIITLKHEALNKNSFSIGAIKAAIWLQDKPSALYSMQDIYKI

Sequences:

>Translated_285_residues
MASYNKICGSNYIKYTLRSKDFRCLALVQIKLRLLTVHLLGVYIANMLNIGLSGSTGKMGETILERIDKFKDCKIAAKFN
STNNLDDLDNFCKNSDVIIDFSTPEILEKLINYALKHNTKLVIGTTGLQPQHFKLLEKAAQTLPVLYSANMSIGANLLSY
LAKEVTKILDDYDVEILETHHRNKKDSPSGTAVMLAETIASKKGLNITFNRGNRLRSEKEIGISSLRGGNVHGIHEISFL
GDDEIITLKHEALNKNSFSIGAIKAAIWLQDKPSALYSMQDIYKI
>Mature_284_residues
ASYNKICGSNYIKYTLRSKDFRCLALVQIKLRLLTVHLLGVYIANMLNIGLSGSTGKMGETILERIDKFKDCKIAAKFNS
TNNLDDLDNFCKNSDVIIDFSTPEILEKLINYALKHNTKLVIGTTGLQPQHFKLLEKAAQTLPVLYSANMSIGANLLSYL
AKEVTKILDDYDVEILETHHRNKKDSPSGTAVMLAETIASKKGLNITFNRGNRLRSEKEIGISSLRGGNVHGIHEISFLG
DDEIITLKHEALNKNSFSIGAIKAAIWLQDKPSALYSMQDIYKI

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; second step. [C]

COG id: COG0289

COG function: function code E; Dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydrodipicolinate reductase family [H]

Homologues:

Organism=Escherichia coli, GI1786214, Length=265, Percent_Identity=27.5471698113208, Blast_Score=120, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022663
- InterPro:   IPR000846
- InterPro:   IPR022664
- InterPro:   IPR011770
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05173 DapB_C; PF01113 DapB_N [H]

EC number: =1.3.1.26 [H]

Molecular weight: Translated: 31767; Mature: 31636

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS01298 DAPB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASYNKICGSNYIKYTLRSKDFRCLALVQIKLRLLTVHLLGVYIANMLNIGLSGSTGKMG
CCCCHHHHCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ETILERIDKFKDCKIAAKFNSTNNLDDLDNFCKNSDVIIDFSTPEILEKLINYALKHNTK
HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCE
LVIGTTGLQPQHFKLLEKAAQTLPVLYSANMSIGANLLSYLAKEVTKILDDYDVEILETH
EEEEECCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
HRNKKDSPSGTAVMLAETIASKKGLNITFNRGNRLRSEKEIGISSLRGGNVHGIHEISFL
CCCCCCCCCCCEEEHHHHHHCCCCCEEEECCCCCCCCHHHCCHHHCCCCCCCCEEEEEEE
GDDEIITLKHEALNKNSFSIGAIKAAIWLQDKPSALYSMQDIYKI
CCCCEEEEEHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure 
ASYNKICGSNYIKYTLRSKDFRCLALVQIKLRLLTVHLLGVYIANMLNIGLSGSTGKMG
CCCHHHHCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ETILERIDKFKDCKIAAKFNSTNNLDDLDNFCKNSDVIIDFSTPEILEKLINYALKHNTK
HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCE
LVIGTTGLQPQHFKLLEKAAQTLPVLYSANMSIGANLLSYLAKEVTKILDDYDVEILETH
EEEEECCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
HRNKKDSPSGTAVMLAETIASKKGLNITFNRGNRLRSEKEIGISSLRGGNVHGIHEISFL
CCCCCCCCCCCEEEHHHHHHCCCCCEEEECCCCCCCCHHHCCHHHCCCCCCCCEEEEEEE
GDDEIITLKHEALNKNSFSIGAIKAAIWLQDKPSALYSMQDIYKI
CCCCEEEEEHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA