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The map label for this gene is ybhL [C]

Identifier: 15892112

GI number: 15892112

Start: 197114

End: 197824

Strand: Reverse

Name: ybhL [C]

Synonym: RC0189

Alternate gene names: 15892112

Gene position: 197824-197114 (Counterclockwise)

Preceding gene: 15892113

Following gene: 15892111

Centisome position: 15.59

GC content: 33.33

Gene sequence:

>711_bases
ATGATCGATTATACAAAAACTTTAACTGCCGCCTCAAAACATAAAACTTTTGATGAAGGCTTAAGACAATACATGCTTAA
AGTATATAATTATATGGCTTTAGCACTTTTACTAACCGGTGTAGCAGCCGTAACGACTATATCAGTTGAGCCTATTTATA
ATTTAATGTTTCAAACAGGTTTCGGTACTATTATAATGTTTGCTCCGCTCGGTATTGCTTTATATTTCTTTATGGGCTTC
GGACAAATGAACCTGCCAACGGCACAAATATTATTTTGGGTTTATGCCGGTTTAACCGGTATGTCGCTTGCATATTTAGC
TCTTATTTATACCGGTGCATCAATAGCTCGTACTTTCTTTATTTGCTCTTCCGTTTTTGGAGCAATGAGTTTATACGGTT
ATAGCACAAGTAGAGATTTAACATCTATGGGTTCATTTTTTGCAATGGGTCTTATAGGTCTTATCATTGCTTCATTAGTT
AACTTGTTTCTAAAAAGCTCGGCTCTTTCTTTTGCTACTTCTCTTATTGGAATAGTAATATTTATGGGATTAATTGCTTG
GGATACTCAAAAGATTAAGTCTATGTATTACATGGCAGGAAACGATGAAGTAGGACAAAAGCTTTCTATTATGGCAGCCT
TTACTTTATATTTAGATTTTATAAATCTTTTCCTATATTTAATGAGATTTTTAGGCAATAGAAGAGATTAA

Upstream 100 bases:

>100_bases
TCAATGCAAGATATTTATAAAATATAATTAATATAGCTTGAAAAAATACCTTTAAGAGGCTATATTTTATTATGTAAATA
ACATAATCCTAAGGTTACTT

Downstream 100 bases:

>100_bases
TTGGTATCATTCTTGCAAAGTCATGATTTTATTTCATTGCTTCGGTTTTTTCATTGTTATATCACGATCAAATCTATTAC
TGAATAGTTTTTAAAAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MIDYTKTLTAASKHKTFDEGLRQYMLKVYNYMALALLLTGVAAVTTISVEPIYNLMFQTGFGTIIMFAPLGIALYFFMGF
GQMNLPTAQILFWVYAGLTGMSLAYLALIYTGASIARTFFICSSVFGAMSLYGYSTSRDLTSMGSFFAMGLIGLIIASLV
NLFLKSSALSFATSLIGIVIFMGLIAWDTQKIKSMYYMAGNDEVGQKLSIMAAFTLYLDFINLFLYLMRFLGNRRD

Sequences:

>Translated_236_residues
MIDYTKTLTAASKHKTFDEGLRQYMLKVYNYMALALLLTGVAAVTTISVEPIYNLMFQTGFGTIIMFAPLGIALYFFMGF
GQMNLPTAQILFWVYAGLTGMSLAYLALIYTGASIARTFFICSSVFGAMSLYGYSTSRDLTSMGSFFAMGLIGLIIASLV
NLFLKSSALSFATSLIGIVIFMGLIAWDTQKIKSMYYMAGNDEVGQKLSIMAAFTLYLDFINLFLYLMRFLGNRRD
>Mature_236_residues
MIDYTKTLTAASKHKTFDEGLRQYMLKVYNYMALALLLTGVAAVTTISVEPIYNLMFQTGFGTIIMFAPLGIALYFFMGF
GQMNLPTAQILFWVYAGLTGMSLAYLALIYTGASIARTFFICSSVFGAMSLYGYSTSRDLTSMGSFFAMGLIGLIIASLV
NLFLKSSALSFATSLIGIVIFMGLIAWDTQKIKSMYYMAGNDEVGQKLSIMAAFTLYLDFINLFLYLMRFLGNRRD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Homo sapiens, GI116812579, Length=215, Percent_Identity=26.046511627907, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1787004, Length=219, Percent_Identity=42.9223744292237, Blast_Score=165, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 26189; Mature: 26189

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDYTKTLTAASKHKTFDEGLRQYMLKVYNYMALALLLTGVAAVTTISVEPIYNLMFQTG
CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FGTIIMFAPLGIALYFFMGFGQMNLPTAQILFWVYAGLTGMSLAYLALIYTGASIARTFF
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICSSVFGAMSLYGYSTSRDLTSMGSFFAMGLIGLIIASLVNLFLKSSALSFATSLIGIVI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMGLIAWDTQKIKSMYYMAGNDEVGQKLSIMAAFTLYLDFINLFLYLMRFLGNRRD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIDYTKTLTAASKHKTFDEGLRQYMLKVYNYMALALLLTGVAAVTTISVEPIYNLMFQTG
CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
FGTIIMFAPLGIALYFFMGFGQMNLPTAQILFWVYAGLTGMSLAYLALIYTGASIARTFF
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICSSVFGAMSLYGYSTSRDLTSMGSFFAMGLIGLIIASLVNLFLKSSALSFATSLIGIVI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMGLIAWDTQKIKSMYYMAGNDEVGQKLSIMAAFTLYLDFINLFLYLMRFLGNRRD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]