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The map label for this gene is 15891963

Identifier: 15891963

GI number: 15891963

Start: 37792

End: 38109

Strand: Reverse

Name: 15891963

Synonym: RC0040

Alternate gene names: NA

Gene position: 38109-37792 (Counterclockwise)

Preceding gene: 15891964

Following gene: 15891962

Centisome position: 3.0

GC content: 27.67

Gene sequence:

>318_bases
GTGTTACCTGATCAAGCGCTACCTATTTATAATTTATTAGAAAAATTACTAAAAGAAACTCACAAATCTATTAATGATTG
TTATAAAAACGAAAACTTATATAAACATCAATTAGCAAAAATTTATTGTCAACAAGCACAAATCTGTACACCTAATGGCT
CAACAAAACTATCTAAAAACTCAATAGGATTGTATGAAAACGCTGCTAACCTTGGTTCTGAAGAGGCAAATATAAAACTT
GGGAAGATTGAATTTAAGAGCGGAAATTATGTAAAAGCTTTAGAATATTTTAAAAACTTATGCAAAAGAAGCTTTTAA

Upstream 100 bases:

>100_bases
AGCTAAATCTCTTTGGAAGTATATTACCGCCTCTAAATCTATTACAGAAATATCTCAAAATCTCGATAAAGTAATATATG
ATAAGCTTTTACATCAGCCT

Downstream 100 bases:

>100_bases
TGAATTATTACATCTAAAAGAATCAGAACTAAAAAAGAAAATACAGCAAAAGAAGCTAAATTAACATCAGAAATAATTGA
ATTATATTCAAGCCAAGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MLPDQALPIYNLLEKLLKETHKSINDCYKNENLYKHQLAKIYCQQAQICTPNGSTKLSKNSIGLYENAANLGSEEANIKL
GKIEFKSGNYVKALEYFKNLCKRSF

Sequences:

>Translated_105_residues
MLPDQALPIYNLLEKLLKETHKSINDCYKNENLYKHQLAKIYCQQAQICTPNGSTKLSKNSIGLYENAANLGSEEANIKL
GKIEFKSGNYVKALEYFKNLCKRSF
>Mature_105_residues
MLPDQALPIYNLLEKLLKETHKSINDCYKNENLYKHQLAKIYCQQAQICTPNGSTKLSKNSIGLYENAANLGSEEANIKL
GKIEFKSGNYVKALEYFKNLCKRSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y040_RICCN (Q92JM7)

Other databases:

- EMBL:   AE006914
- PIR:   H97704
- RefSeq:   NP_359677.1
- GeneID:   928625
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0040
- NMPDR:   fig|272944.1.peg.40
- OMA:   SEEAHIT
- ProtClustDB:   CLSK881882
- BioCyc:   RCON272944:RC0040-MONOMER
- GO:   GO:0005488
- InterPro:   IPR011990
- Gene3D:   G3DSA:1.25.40.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11992; Mature: 11992

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDQALPIYNLLEKLLKETHKSINDCYKNENLYKHQLAKIYCQQAQICTPNGSTKLSKN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCC
SIGLYENAANLGSEEANIKLGKIEFKSGNYVKALEYFKNLCKRSF
CCCCHHCHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLPDQALPIYNLLEKLLKETHKSINDCYKNENLYKHQLAKIYCQQAQICTPNGSTKLSKN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCC
SIGLYENAANLGSEEANIKLGKIEFKSGNYVKALEYFKNLCKRSF
CCCCHHCHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893