Click here to switch to the map view.

The map label for this gene is 15891964

Identifier: 15891964

GI number: 15891964

Start: 38531

End: 38800

Strand: Reverse

Name: 15891964

Synonym: RC0041

Alternate gene names: NA

Gene position: 38800-38531 (Counterclockwise)

Preceding gene: 15891966

Following gene: 15891963

Centisome position: 3.06

GC content: 25.19

Gene sequence:

>270_bases
TTGCCTAAAACAGACAAATTGAAACAATTAATAGATATAGTAAATTATTATAAACAGTTAGAAGACAATGCCAAAACTAT
AGGAAATTTCTTAGAAACCGTTAAAAAATTAAATCAGCTTTTAGAAACACCGAAATCAGAAAATAAATTAGAGAATCTTC
TAAATTACCTTAAATATATTTATCTAACATCAAATTTTCCGAAAAAGAAAATTTGGTTACACTTAATTCTGCAAAATGGT
TTAACGATTTATTTACCTCGGGGCATATAA

Upstream 100 bases:

>100_bases
TATATTTTAAATTCTATAAATATAATTAATAAAGAAGTACCAATTAGTATCAATGAGCTTAAAACATATATAGAAAATAA
TTTAAAGTTTTGAAGATGTT

Downstream 100 bases:

>100_bases
TATAAAAGAAAAGTTATTAGAATCATTTAAGCATACAATATGCAAAGATAAAGATTCATTTTATAACAAATTAAATAAGA
CTATTGAAAAATTTTATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MPKTDKLKQLIDIVNYYKQLEDNAKTIGNFLETVKKLNQLLETPKSENKLENLLNYLKYIYLTSNFPKKKIWLHLILQNG
LTIYLPRGI

Sequences:

>Translated_89_residues
MPKTDKLKQLIDIVNYYKQLEDNAKTIGNFLETVKKLNQLLETPKSENKLENLLNYLKYIYLTSNFPKKKIWLHLILQNG
LTIYLPRGI
>Mature_88_residues
PKTDKLKQLIDIVNYYKQLEDNAKTIGNFLETVKKLNQLLETPKSENKLENLLNYLKYIYLTSNFPKKKIWLHLILQNGL
TIYLPRGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y041_RICCN (Q92JM6)

Other databases:

- EMBL:   AE006914
- PIR:   A97705
- RefSeq:   NP_359678.1
- GeneID:   928619
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0041
- NMPDR:   fig|272944.1.peg.41
- OMA:   QNGLTIY
- ProtClustDB:   CLSK881883
- BioCyc:   RCON272944:RC0041-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10538; Mature: 10406

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKTDKLKQLIDIVNYYKQLEDNAKTIGNFLETVKKLNQLLETPKSENKLENLLNYLKYI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YLTSNFPKKKIWLHLILQNGLTIYLPRGI
HHCCCCCHHHHHHHHHHHCCCEEEECCCC
>Mature Secondary Structure 
PKTDKLKQLIDIVNYYKQLEDNAKTIGNFLETVKKLNQLLETPKSENKLENLLNYLKYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YLTSNFPKKKIWLHLILQNGLTIYLPRGI
HHCCCCCHHHHHHHHHHHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893