| Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
|---|---|
| Accession | NC_003065 |
| Length | 214,233 |
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The map label for this gene is 41223336
Identifier: 41223336
GI number: 41223336
Start: 128218
End: 129105
Strand: Direct
Name: 41223336
Synonym: Atu6105
Alternate gene names: NA
Gene position: 128218-129105 (Clockwise)
Preceding gene: 16119918
Following gene: 159161974
Centisome position: 59.85
GC content: 62.5
Gene sequence:
>888_bases ATGATCGATCTTCCCAACACGAACACGCCCGACTGCACCCCCGGATTTCCGGGGGTTTCCTTTGGTCTGTCCTGCGAAGG GTTCCCCGTCGCCCGCGTCGGCGATCACGCCTTTGCCATGCTGCCAGGTCATGCCGGACGGCATTATCTGGCCACCGGCT GGAAGATTGGGCGTCCGCTTCCCGAGTGGCGACGGGGAGACTTCTACGGCCATTGCGGCGAACTCGCCGATGAGGCGGCG TTTAGTGCACACGTCCTTGAACAGGCCGAACATCAGCGCGAAATACAGGCGCTCGGACGTCGGAATACCGCCCCCCATGT GCATACGCCATGGGGTTCGGCCCAGCACTCGACAACCTATGCCGAGGGGATCGAATTCCACTCCACTGCAAGCCACGGCG GCTTCAGGCTCTCGGCCGACCGAAACCGCATTGTCCATCCGCTGCTCCGGGCGGACGACGGGTTCTACGAGGAGGATTGC GCCTGGGCTGCCGTGGCGCTCACCTTCCCTGAACTGTTCACCAGCTTCGAGCAGCGTTGCGCCAGCGAGACGCTAAAGGA CTGGGAGCCCGATGCGTGGGAGGCGATTTTCGCGACTGTGCTTGCTCACGGCGAATCTCATGTGAAGGATCGCCGCGCGT TCAAGCTGGAGCACGCCAGCGACTGGATTGTGATTTCGGCACTTCGATCGGATCATCATCCAGGCATGACCGAGGTGATC GCCACGCGAGCAGGCAGGCGCGATCATGGCGGCGAGGAACGGCGATTTCTCGTGCCGTCACCCGAATACGAAGCAGGCCG TTTCGGCTACGTCATCGATGAAGCGCGCCATGCAGCCTACGACGGCCCATCAAGCTTTGCCTCATGGAAGGGGAGGACGG CGGCATGA
Upstream 100 bases:
>100_bases CCGAGGAATGGCTGACCACCCATGGCTATCCGTCCGCCGTCCTCGAGGACGTCACGGCGGATGAGATAGCCGCCGATGTC GTGGAAGGGAGGGCTGCCGC
Downstream 100 bases:
>100_bases ACCGGTCCATCGATCGACAGGCGGAAATGCGGCGCATGGAAGAAGCGTGCCGGCAGACGCGGCATCAGCTCGACCTGATC GAGCGCCAGATCATTCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MIDLPNTNTPDCTPGFPGVSFGLSCEGFPVARVGDHAFAMLPGHAGRHYLATGWKIGRPLPEWRRGDFYGHCGELADEAA FSAHVLEQAEHQREIQALGRRNTAPHVHTPWGSAQHSTTYAEGIEFHSTASHGGFRLSADRNRIVHPLLRADDGFYEEDC AWAAVALTFPELFTSFEQRCASETLKDWEPDAWEAIFATVLAHGESHVKDRRAFKLEHASDWIVISALRSDHHPGMTEVI ATRAGRRDHGGEERRFLVPSPEYEAGRFGYVIDEARHAAYDGPSSFASWKGRTAA
Sequences:
>Translated_295_residues MIDLPNTNTPDCTPGFPGVSFGLSCEGFPVARVGDHAFAMLPGHAGRHYLATGWKIGRPLPEWRRGDFYGHCGELADEAA FSAHVLEQAEHQREIQALGRRNTAPHVHTPWGSAQHSTTYAEGIEFHSTASHGGFRLSADRNRIVHPLLRADDGFYEEDC AWAAVALTFPELFTSFEQRCASETLKDWEPDAWEAIFATVLAHGESHVKDRRAFKLEHASDWIVISALRSDHHPGMTEVI ATRAGRRDHGGEERRFLVPSPEYEAGRFGYVIDEARHAAYDGPSSFASWKGRTAA >Mature_295_residues MIDLPNTNTPDCTPGFPGVSFGLSCEGFPVARVGDHAFAMLPGHAGRHYLATGWKIGRPLPEWRRGDFYGHCGELADEAA FSAHVLEQAEHQREIQALGRRNTAPHVHTPWGSAQHSTTYAEGIEFHSTASHGGFRLSADRNRIVHPLLRADDGFYEEDC AWAAVALTFPELFTSFEQRCASETLKDWEPDAWEAIFATVLAHGESHVKDRRAFKLEHASDWIVISALRSDHHPGMTEVI ATRAGRRDHGGEERRFLVPSPEYEAGRFGYVIDEARHAAYDGPSSFASWKGRTAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32743; Mature: 32743
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLPNTNTPDCTPGFPGVSFGLSCEGFPVARVGDHAFAMLPGHAGRHYLATGWKIGRPL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCEEECCCCCCCCC PEWRRGDFYGHCGELADEAAFSAHVLEQAEHQREIQALGRRNTAPHVHTPWGSAQHSTTY CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHH AEGIEFHSTASHGGFRLSADRNRIVHPLLRADDGFYEEDCAWAAVALTFPELFTSFEQRC HHCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ASETLKDWEPDAWEAIFATVLAHGESHVKDRRAFKLEHASDWIVISALRSDHHPGMTEVI HHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCEEEEEEECCCCCCCHHHHH ATRAGRRDHGGEERRFLVPSPEYEAGRFGYVIDEARHAAYDGPSSFASWKGRTAA HHHCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCC >Mature Secondary Structure MIDLPNTNTPDCTPGFPGVSFGLSCEGFPVARVGDHAFAMLPGHAGRHYLATGWKIGRPL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCCCCEEECCCCCCCCC PEWRRGDFYGHCGELADEAAFSAHVLEQAEHQREIQALGRRNTAPHVHTPWGSAQHSTTY CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHH AEGIEFHSTASHGGFRLSADRNRIVHPLLRADDGFYEEDCAWAAVALTFPELFTSFEQRC HHCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ASETLKDWEPDAWEAIFATVLAHGESHVKDRRAFKLEHASDWIVISALRSDHHPGMTEVI HHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCEEEEEEECCCCCCCHHHHH ATRAGRRDHGGEERRFLVPSPEYEAGRFGYVIDEARHAAYDGPSSFASWKGRTAA HHHCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA