| Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
|---|---|
| Accession | NC_003065 |
| Length | 214,233 |
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The map label for this gene is 16119918
Identifier: 16119918
GI number: 16119918
Start: 127748
End: 128221
Strand: Direct
Name: 16119918
Synonym: Atu6104
Alternate gene names: NA
Gene position: 127748-128221 (Clockwise)
Preceding gene: 159161973
Following gene: 41223336
Centisome position: 59.63
GC content: 65.4
Gene sequence:
>474_bases ATGTCCGCACATCTCGCATTCCTGGCGCCGATCGGCACCGTTCTGGCCTGGTCCAACGGCCAGCCGCGCCCGCCGGAGCG CCATCGCAAAAAGCTCTCCGCGTGGAAGACCAACAACAGCAGAGGCCGGCTGATACGCAAGCAGGACGAGCGCGGCGCCG GCAACATCAACCTGCCGCCCAGCTTCACGCTCCACGAAGGCGACTATGGCAGCGGCGGTGTTATTGCGATCCGCGTCCAC CGCACATTTTCGCTGGAAACCAGCCTGATGTTCACCATCGTCGAACGTCCGGCGGTCGGCAGTTGCCGTGTCTTCGACCG CCCTGGCGACAGCGCCGACCTCGTCCATCTCGCGACGAGCCGGAAGGCTGCCGAGGAATGGCTGACCACCCATGGCTATC CGTCCGCCGTCCTCGAGGACGTCACGGCGGATGAGATAGCCGCCGATGTCGTGGAAGGGAGGGCTGCCGCATGA
Upstream 100 bases:
>100_bases GTAGCCGCGTCCCTCCTTCCCCTTCCGAACGATTGTCCGCCGCCGGTGATTTCCACCGGCGGCGGCTTCGTTTCCAGCCC TAAAGATCAAGGAGATCAAC
Downstream 100 bases:
>100_bases TCGATCTTCCCAACACGAACACGCCCGACTGCACCCCCGGATTTCCGGGGGTTTCCTTTGGTCTGTCCTGCGAAGGGTTC CCCGTCGCCCGCGTCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSAHLAFLAPIGTVLAWSNGQPRPPERHRKKLSAWKTNNSRGRLIRKQDERGAGNINLPPSFTLHEGDYGSGGVIAIRVH RTFSLETSLMFTIVERPAVGSCRVFDRPGDSADLVHLATSRKAAEEWLTTHGYPSAVLEDVTADEIAADVVEGRAAA
Sequences:
>Translated_157_residues MSAHLAFLAPIGTVLAWSNGQPRPPERHRKKLSAWKTNNSRGRLIRKQDERGAGNINLPPSFTLHEGDYGSGGVIAIRVH RTFSLETSLMFTIVERPAVGSCRVFDRPGDSADLVHLATSRKAAEEWLTTHGYPSAVLEDVTADEIAADVVEGRAAA >Mature_156_residues SAHLAFLAPIGTVLAWSNGQPRPPERHRKKLSAWKTNNSRGRLIRKQDERGAGNINLPPSFTLHEGDYGSGGVIAIRVHR TFSLETSLMFTIVERPAVGSCRVFDRPGDSADLVHLATSRKAAEEWLTTHGYPSAVLEDVTADEIAADVVEGRAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17069; Mature: 16938
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHLAFLAPIGTVLAWSNGQPRPPERHRKKLSAWKTNNSRGRLIRKQDERGAGNINLPP CCCCCHHHHCHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC SFTLHEGDYGSGGVIAIRVHRTFSLETSLMFTIVERPAVGSCRVFDRPGDSADLVHLATS CEEEECCCCCCCCEEEEEEEEEEECCHHEEEEEECCCCCCCEEEECCCCCCCCEEEEHHH RKAAEEWLTTHGYPSAVLEDVTADEIAADVVEGRAAA HHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCCCC >Mature Secondary Structure SAHLAFLAPIGTVLAWSNGQPRPPERHRKKLSAWKTNNSRGRLIRKQDERGAGNINLPP CCCCHHHHCHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC SFTLHEGDYGSGGVIAIRVHRTFSLETSLMFTIVERPAVGSCRVFDRPGDSADLVHLATS CEEEECCCCCCCCEEEEEEEEEEECCHHEEEEEECCCCCCCEEEECCCCCCCCEEEEHHH RKAAEEWLTTHGYPSAVLEDVTADEIAADVVEGRAAA HHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA