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The map label for this gene is traB [H]

Identifier: 229007180

GI number: 229007180

Start: 147806

End: 149002

Strand: Direct

Name: traB [H]

Synonym: Atu6129

Alternate gene names: 229007180

Gene position: 147806-149002 (Clockwise)

Preceding gene: 16119946

Following gene: 16119948

Centisome position: 68.99

GC content: 65.41

Gene sequence:

>1197_bases
TTGACCCGTGACCGCTGGCGTGTGGCGCTCCTGATCCTGCTTTCGATCGCCGTCGGAGCGGTCGGCTGGAGCGGCGAGGC
CCTCCTTCTTCCGACAGCCATGCTCTTTCCGTTGCTATGGGCGCAATCTCCATCACGACTGGTTGCGGGCGCGGTGTCTG
CCGGGTACTTCCTCACCGCCTCGCGCGGCCTGCCGCAGGGTGTGGCGAACTTCTACGCCGCCGATTTCTGGCACGGCCTC
CTGCTATGGCTGGCGGCCTCGGCCGGCTTTGTCGCCGTGCATGCGGCGTTCTGGCCCGCGCGCTTGCAAAAGAGGCTTCC
GGGAAGGGGCGCTCTGGGTTGGGGAAAGCCGGTGCGCTACCTTGCGGCCGCGGTGCTGATGGGGCTGCCGCCCTTCGGCA
TCACCGGGTGGGCGCATCCACTAACCGCAGCGGGCATTCTGTTTCCCGGCTTTGGATGGTGGGGGCTGGGTGCGACCACA
GCCGGCCTCGCGATGATGACATCGCGATACTGGCCGGCTGCTGCCATTGCCCTGGGAGGCTTCTGGTTCTGGTCCGCCGC
TACGTGGACGCAACCTGTCCTACCGGATGGATGGAAAGGCGTCGACCTCGAACAGGGTCAAACGCTTGGACGTGATGGTT
CGCTTGACCATCACCGTGACCTGATCGCAACGGTGCGCGCGGCGGCAGGAGCGGAAACCCGTGTCATCGTTCTTCCCGAA
AGCGCCCTCGGCTTATGGACCCCGACTGTCGCACGGCTTTGGCAGGCGGGCTTGCGAGGGGCGGACGTCACCGTGATCGC
CGGCGCGGCCGTCATCGATCCGGGCGGCTACGACAACGTCATGGTGACGGTCTCGGAGGGTGAAACACGGATCCTCTATC
GCGAGCGGATGCCGATCCCGGTATCGATGTGGCAGCCATGGTTGCAATGGACCGGGCAGGGCGGTGGCGCTCAAGCGCAT
TTCTTCGCCAACCCGGCCGTGGATCTCGCTGGCACGAGGATCGCGCCGCTGATCTGCTACGAGCAGCTCATCGTCTGGCC
CATACTGCACTCGATGCTGTTTTCCCCCGCCGCCATCGTCGCCACGGGCAACGGATGGTGGACCGAGGGAACGTCGATCG
TCGCCATCCAACAAGCAGGCGTGATCGCCTGGGCGAAACTCTTCGGGCGACCCGTCGTCACGGCTTTCAACACATAA

Upstream 100 bases:

>100_bases
CTATTTCTCCATTCTTCCTTTGCGAGTTCCTATGATTCACGATACTTCGGCCCGATCCCGGACAGCGGTCTTCTCGGCCT
GGCGCGGCCGGTGTTCACGT

Downstream 100 bases:

>100_bases
GGAGACTTTCGCGATGGTCGATTCCGCCCTCATCAAGGAATGCAGCGATCCCGGCCTGAAACCCGCGATCGTCGAACAGT
TCATCGAACGGGCAGGGGCG

Product: conjugal transfer protein TraB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTRDRWRVALLILLSIAVGAVGWSGEALLLPTAMLFPLLWAQSPSRLVAGAVSAGYFLTASRGLPQGVANFYAADFWHGL
LLWLAASAGFVAVHAAFWPARLQKRLPGRGALGWGKPVRYLAAAVLMGLPPFGITGWAHPLTAAGILFPGFGWWGLGATT
AGLAMMTSRYWPAAAIALGGFWFWSAATWTQPVLPDGWKGVDLEQGQTLGRDGSLDHHRDLIATVRAAAGAETRVIVLPE
SALGLWTPTVARLWQAGLRGADVTVIAGAAVIDPGGYDNVMVTVSEGETRILYRERMPIPVSMWQPWLQWTGQGGGAQAH
FFANPAVDLAGTRIAPLICYEQLIVWPILHSMLFSPAAIVATGNGWWTEGTSIVAIQQAGVIAWAKLFGRPVVTAFNT

Sequences:

>Translated_398_residues
MTRDRWRVALLILLSIAVGAVGWSGEALLLPTAMLFPLLWAQSPSRLVAGAVSAGYFLTASRGLPQGVANFYAADFWHGL
LLWLAASAGFVAVHAAFWPARLQKRLPGRGALGWGKPVRYLAAAVLMGLPPFGITGWAHPLTAAGILFPGFGWWGLGATT
AGLAMMTSRYWPAAAIALGGFWFWSAATWTQPVLPDGWKGVDLEQGQTLGRDGSLDHHRDLIATVRAAAGAETRVIVLPE
SALGLWTPTVARLWQAGLRGADVTVIAGAAVIDPGGYDNVMVTVSEGETRILYRERMPIPVSMWQPWLQWTGQGGGAQAH
FFANPAVDLAGTRIAPLICYEQLIVWPILHSMLFSPAAIVATGNGWWTEGTSIVAIQQAGVIAWAKLFGRPVVTAFNT
>Mature_397_residues
TRDRWRVALLILLSIAVGAVGWSGEALLLPTAMLFPLLWAQSPSRLVAGAVSAGYFLTASRGLPQGVANFYAADFWHGLL
LWLAASAGFVAVHAAFWPARLQKRLPGRGALGWGKPVRYLAAAVLMGLPPFGITGWAHPLTAAGILFPGFGWWGLGATTA
GLAMMTSRYWPAAAIALGGFWFWSAATWTQPVLPDGWKGVDLEQGQTLGRDGSLDHHRDLIATVRAAAGAETRVIVLPES
ALGLWTPTVARLWQAGLRGADVTVIAGAAVIDPGGYDNVMVTVSEGETRILYRERMPIPVSMWQPWLQWTGQGGGAQAHF
FANPAVDLAGTRIAPLICYEQLIVWPILHSMLFSPAAIVATGNGWWTEGTSIVAIQQAGVIAWAKLFGRPVVTAFNT

Specific function: Enhances conjugal transfer of the Ti plasmid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016707
- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: NA

Molecular weight: Translated: 42580; Mature: 42449

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRDRWRVALLILLSIAVGAVGWSGEALLLPTAMLFPLLWAQSPSRLVAGAVSAGYFLTA
CCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEE
SRGLPQGVANFYAADFWHGLLLWLAASAGFVAVHAAFWPARLQKRLPGRGALGWGKPVRY
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHH
LAAAVLMGLPPFGITGWAHPLTAAGILFPGFGWWGLGATTAGLAMMTSRYWPAAAIALGG
HHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
FWFWSAATWTQPVLPDGWKGVDLEQGQTLGRDGSLDHHRDLIATVRAAAGAETRVIVLPE
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECC
SALGLWTPTVARLWQAGLRGADVTVIAGAAVIDPGGYDNVMVTVSEGETRILYRERMPIP
CCCCCCCHHHHHHHHHCCCCCCEEEEECEEEECCCCCCCEEEEEECCCEEEEEECCCCCC
VSMWQPWLQWTGQGGGAQAHFFANPAVDLAGTRIAPLICYEQLIVWPILHSMLFSPAAIV
HHHHHHHHHCCCCCCCEEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
ATGNGWWTEGTSIVAIQQAGVIAWAKLFGRPVVTAFNT
EECCCEEECCCEEEEEECCCHHHHHHHHCCCCEEECCC
>Mature Secondary Structure 
TRDRWRVALLILLSIAVGAVGWSGEALLLPTAMLFPLLWAQSPSRLVAGAVSAGYFLTA
CCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEE
SRGLPQGVANFYAADFWHGLLLWLAASAGFVAVHAAFWPARLQKRLPGRGALGWGKPVRY
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCCHHHHH
LAAAVLMGLPPFGITGWAHPLTAAGILFPGFGWWGLGATTAGLAMMTSRYWPAAAIALGG
HHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
FWFWSAATWTQPVLPDGWKGVDLEQGQTLGRDGSLDHHRDLIATVRAAAGAETRVIVLPE
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECC
SALGLWTPTVARLWQAGLRGADVTVIAGAAVIDPGGYDNVMVTVSEGETRILYRERMPIP
CCCCCCCHHHHHHHHHCCCCCCEEEEECEEEECCCCCCCEEEEEECCCEEEEEECCCCCC
VSMWQPWLQWTGQGGGAQAHFFANPAVDLAGTRIAPLICYEQLIVWPILHSMLFSPAAIV
HHHHHHHHHCCCCCCCEEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
ATGNGWWTEGTSIVAIQQAGVIAWAKLFGRPVVTAFNT
EECCCEEECCCEEEEEECCCHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763953; 11743193; 11743194 [H]